BLASTX nr result

ID: Glycyrrhiza23_contig00011893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011893
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594626.1| DEAD-box ATP-dependent RNA helicase [Medicag...    72   2e-10
ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   1e-08
ref|XP_003534800.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   3e-08

>ref|XP_003594626.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355483674|gb|AES64877.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 1182

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 42/67 (62%), Positives = 48/67 (71%)
 Frame = -3

Query: 583  SDKKDLRAPEAGAASDPKMSAVSPSTQGNSSSLGAAEHLEQQLPVVGSTVPDNPEAVVDV 404
            SD  D+  PEAGA SDPKM  +  +TQGNS +    EH+EQ LPVVG T   NPEAVVDV
Sbjct: 1119 SDTNDVVPPEAGA-SDPKMFPIPANTQGNSVT--GTEHVEQ-LPVVGGTGSTNPEAVVDV 1174

Query: 403  THQPASD 383
            +HQPASD
Sbjct: 1175 SHQPASD 1181


>ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine max]
          Length = 1188

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = -3

Query: 595  DQQVSDKKDLRAPEAGAASDPKMSAVSPSTQGNSSSLGAAEHLEQQLPVVGSTVPDNPEA 416
            DQQ+ D+KDLRA E G  SDP+M  VS  +    +S    E +EQQ PVV ST   NPEA
Sbjct: 1119 DQQLPDQKDLRAQEVGT-SDPRMLPVSSGSGSQGNSFLGTEQVEQQ-PVVSSTDAGNPEA 1176

Query: 415  VVDVTHQPASD 383
            V D++HQ ASD
Sbjct: 1177 VADLSHQSASD 1187


>ref|XP_003534800.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine max]
          Length = 936

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -3

Query: 595  DQQVSDKKDLRAPEAGAASDPKMSAVSPS--TQGNSSSLGAAEHLEQQLPVVGSTVPDNP 422
            DQQ+ D+KD+RA E G  SDP+M  VS    TQGNS  LG  E +EQQ P+V ST P NP
Sbjct: 867  DQQLPDQKDIRAHEVGT-SDPRMLPVSSGLGTQGNSF-LGT-EQVEQQ-PIVSSTDPGNP 922

Query: 421  EAVVDVTHQPASD 383
            EAV D++HQ  SD
Sbjct: 923  EAVADLSHQSVSD 935


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