BLASTX nr result

ID: Glycyrrhiza23_contig00011875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011875
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subun...   228   4e-57
ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subun...   227   5e-57
ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subun...   225   2e-56
ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subun...   224   4e-56
ref|XP_003631017.1| hypothetical protein MTR_8g106170 [Medicago ...   223   1e-55

>ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 801

 Score =  228 bits (580), Expect = 4e-57
 Identities = 142/283 (50%), Positives = 151/283 (53%)
 Frame = -3

Query: 1465 TEDQNDASNNESKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMPLNAGQYSAPNSSG 1286
            +EDQNDA NNE+KN                              R+P+   QYS P+S  
Sbjct: 526  SEDQNDAFNNEAKNLLGPAAPPPRPGMPSIRPLPPPPGLALNLPRVPV---QYSVPHSGA 582

Query: 1285 LXXXXXXXXXXXXXXXXXXXXXXXMQMTSGQHSXXXXXXXXXXXXXXMNSQGIHVPPPPG 1106
            L                         M SGQ S              MN+QGI +PPPPG
Sbjct: 583  LPMPPPRPMMPSIRPAPPPPM----SMNSGQQSVMAGQPHPMHPSIHMNNQGIPIPPPPG 638

Query: 1105 SQFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRQKLDD 926
            SQFT                                                PKRQKLDD
Sbjct: 639  SQFTPVPVPRPFVPLSVPPSVMPMMHPPPLPQGVPPPPPPEEAPPPLPEEPEPKRQKLDD 698

Query: 925  SALIPEDQFLAQHPGLVRICISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 746
            SALIPEDQFLAQHPG V IC+SVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL
Sbjct: 699  SALIPEDQFLAQHPGPVCICVSVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 758

Query: 745  PANKQKLSGKPGFLKDNMSLAHYNISGGEMLALTLRERGGRKR 617
            PANKQKLSGKPGFLKDNMSLAHYN+ GGE L LTLRERGGRKR
Sbjct: 759  PANKQKLSGKPGFLKDNMSLAHYNVGGGETLTLTLRERGGRKR 801


>ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subunit 1-like isoform 1
            [Glycine max] gi|356575642|ref|XP_003555947.1| PREDICTED:
            probable splicing factor 3A subunit 1-like isoform 2
            [Glycine max]
          Length = 798

 Score =  227 bits (579), Expect = 5e-57
 Identities = 142/283 (50%), Positives = 152/283 (53%)
 Frame = -3

Query: 1465 TEDQNDASNNESKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMPLNAGQYSAPNSSG 1286
            +EDQNDASNNE+KN                              R+P+   QYSAP+S  
Sbjct: 523  SEDQNDASNNEAKNLLGPAAPPPRPGMPSVRPLPLPPGLALNLPRVPV---QYSAPHSGA 579

Query: 1285 LXXXXXXXXXXXXXXXXXXXXXXXMQMTSGQHSXXXXXXXXXXXXXXMNSQGIHVPPPPG 1106
            L                         M +GQ S              MN+ GI +PPPPG
Sbjct: 580  LPMPPPRSMMPSIRPALPPPMP----MNTGQQSIIAGQPPPMHPSIPMNNHGIPIPPPPG 635

Query: 1105 SQFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRQKLDD 926
            SQFT                                                PKRQKLDD
Sbjct: 636  SQFTPVPVPRPYVPLSVPPSVMPMMHPPPLPQGLPPPPPPEEAPPPLPEEPEPKRQKLDD 695

Query: 925  SALIPEDQFLAQHPGLVRICISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 746
            SALIPEDQFLAQHPG VRI +SVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL
Sbjct: 696  SALIPEDQFLAQHPGPVRISVSVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 755

Query: 745  PANKQKLSGKPGFLKDNMSLAHYNISGGEMLALTLRERGGRKR 617
            PANKQKLSGKPGFLKDNMSLAHYN+ GGE L LTLRERGGRKR
Sbjct: 756  PANKQKLSGKPGFLKDNMSLAHYNVGGGETLTLTLRERGGRKR 798


>ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 802

 Score =  225 bits (574), Expect = 2e-56
 Identities = 141/282 (50%), Positives = 151/282 (53%)
 Frame = -3

Query: 1462 EDQNDASNNESKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMPLNAGQYSAPNSSGL 1283
            EDQNDASNNE++N                              R+P+   QYSAP+S  L
Sbjct: 528  EDQNDASNNEARNLLGPAAPPPRPGMPSVRPLPPPPGLALNLPRVPI---QYSAPHSGAL 584

Query: 1282 XXXXXXXXXXXXXXXXXXXXXXXMQMTSGQHSXXXXXXXXXXXXXXMNSQGIHVPPPPGS 1103
                                     M +GQ S              MN+QGI +PPPPGS
Sbjct: 585  PMPPPRPMMPSIRPAPPPPMP----MNTGQQSVMAGQPPPMHPSIPMNNQGIPIPPPPGS 640

Query: 1102 QFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRQKLDDS 923
            QFT                                                PKRQKLDDS
Sbjct: 641  QFTHVPVPRPFVPLSVPPSVMPMMHPPPLPQGLPPPPPPEEAPPPLPEEPEPKRQKLDDS 700

Query: 922  ALIPEDQFLAQHPGLVRICISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLP 743
            ALIPEDQFLAQHPG VRI +SVPNVDEGNLKGQVLEITV SLSETVGSLKEKIAGEIQLP
Sbjct: 701  ALIPEDQFLAQHPGPVRISVSVPNVDEGNLKGQVLEITVLSLSETVGSLKEKIAGEIQLP 760

Query: 742  ANKQKLSGKPGFLKDNMSLAHYNISGGEMLALTLRERGGRKR 617
            ANKQKLSGKPGFLKDNMSLAHYN+ GGE L LTLRERGGRKR
Sbjct: 761  ANKQKLSGKPGFLKDNMSLAHYNVGGGETLTLTLRERGGRKR 802


>ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 806

 Score =  224 bits (571), Expect = 4e-56
 Identities = 140/282 (49%), Positives = 151/282 (53%)
 Frame = -3

Query: 1462 EDQNDASNNESKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMPLNAGQYSAPNSSGL 1283
            EDQNDASNNE++N                              R+P+   QYSAP+S  L
Sbjct: 532  EDQNDASNNEARNFLGPAAPPPRPGMPSVRPLPPPPGLALNLPRVPV---QYSAPHSGAL 588

Query: 1282 XXXXXXXXXXXXXXXXXXXXXXXMQMTSGQHSXXXXXXXXXXXXXXMNSQGIHVPPPPGS 1103
                                     M +GQ S              MN+QGI +PPPPGS
Sbjct: 589  PMPPPRPMMPSIRPAPPPPMP----MNTGQQSVMAGQPPPMHPSIPMNNQGIPIPPPPGS 644

Query: 1102 QFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRQKLDDS 923
             FT                                                PKRQKLDDS
Sbjct: 645  HFTHVPVPRPFVPLSVPQSVMPMMHPPPLPQGVPPPLPPEEAPPPLPEEPEPKRQKLDDS 704

Query: 922  ALIPEDQFLAQHPGLVRICISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLP 743
            ALIPEDQFLAQHPG VRI +SVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLP
Sbjct: 705  ALIPEDQFLAQHPGPVRISVSVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLP 764

Query: 742  ANKQKLSGKPGFLKDNMSLAHYNISGGEMLALTLRERGGRKR 617
            ANKQKLSGKPGFLKDNMSLAHYN+ GGE L L+LRERGGRKR
Sbjct: 765  ANKQKLSGKPGFLKDNMSLAHYNVGGGETLTLSLRERGGRKR 806


>ref|XP_003631017.1| hypothetical protein MTR_8g106170 [Medicago truncatula]
            gi|355525039|gb|AET05493.1| hypothetical protein
            MTR_8g106170 [Medicago truncatula]
          Length = 804

 Score =  223 bits (568), Expect = 1e-55
 Identities = 142/283 (50%), Positives = 150/283 (53%)
 Frame = -3

Query: 1465 TEDQNDASNNESKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMPLNAGQYSAPNSSG 1286
            +EDQNDA NNESKN                              R  ++  QYS PNS G
Sbjct: 524  SEDQNDAYNNESKNLPGPAAPPPRPGMPSVRPLPPPPGLALNLPRGLMHNMQYSNPNSIG 583

Query: 1285 LXXXXXXXXXXXXXXXXXXXXXXXMQMTSGQHSXXXXXXXXXXXXXXMNSQGIHVPPPPG 1106
            L                        QM  GQHS              MN+QGI +PPPPG
Sbjct: 584  LPMPPPRPGMHMMQSLRPAPPPPM-QMPGGQHSMMGGQPPPMHPSISMNNQGIPIPPPPG 642

Query: 1105 SQFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRQKLDD 926
            SQFT                                                 KRQK DD
Sbjct: 643  SQFTPVPRPYAPHPHPSSGMMPMMHPPPPPQGVPPPPPPEEAPPPLPEEPEP-KRQKHDD 701

Query: 925  SALIPEDQFLAQHPGLVRICISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 746
            SALIPED+FLAQHPG  RI ISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL
Sbjct: 702  SALIPEDKFLAQHPGPARISISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 761

Query: 745  PANKQKLSGKPGFLKDNMSLAHYNISGGEMLALTLRERGGRKR 617
            PANKQKLSGKPGFLKDNMSLAHYN+SGGE L+L LRERGGRKR
Sbjct: 762  PANKQKLSGKPGFLKDNMSLAHYNVSGGETLSLALRERGGRKR 804


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