BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011868
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619770.1| Pentatricopeptide repeat-containing protein ...   219   2e-55
ref|XP_003619805.1| Pentatricopeptide repeat-containing protein ...   218   3e-55
ref|XP_003620177.1| Pentatricopeptide repeat-containing protein ...   216   1e-54
ref|XP_003594869.1| Pentatricopeptide repeat-containing protein ...   215   3e-54
ref|XP_003620129.1| Pentatricopeptide repeat-containing protein ...   209   2e-52

>ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494785|gb|AES75988.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  219 bits (558), Expect = 2e-55
 Identities = 101/138 (73%), Positives = 121/138 (87%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EMHDRGQP +I+TYNS+L  LCKN H+DKAIAL+  +KDQGI+PD+YTY +LI GLC+ G
Sbjct: 410 EMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSG 469

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           +L++AQ+VF+DLL+KGYNL+VYTYT +IQG C KGLFD ALALLSKMEDNGCIPN  TYE
Sbjct: 470 KLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYE 529

Query: 362 IIILALFEKGENDKAEKL 415
           I+IL+LFEK END AEKL
Sbjct: 530 IVILSLFEKDENDMAEKL 547



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/137 (32%), Positives = 86/137 (62%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           M  RG   ++ +Y ++++ LCK + +D+A+ L ++++ + I P++ TYN LIDGL K G+
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
           +    ++  ++  +G   N+ TY +++  LC     DKA+ALL+ ++D G  P++ TY +
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460

Query: 365 IILALFEKGENDKAEKL 415
           +I  L + G+ + A+K+
Sbjct: 461 LIKGLCQSGKLEDAQKV 477



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/134 (27%), Positives = 77/134 (57%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   D V+Y +L++ LCK   +  A+ L+K++  + +QP+   YN++ID +CK   + +
Sbjct: 169 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVND 228

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIIL 373
           A +++  ++ K  + + +T  ++I G C  G   +A+ LL KM      P + T+ I++ 
Sbjct: 229 AFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVD 288

Query: 374 ALFEKGENDKAEKL 415
           A  ++G+  +A+ +
Sbjct: 289 AFCKEGKVKEAKMM 302



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/119 (32%), Positives = 64/119 (53%)
 Frame = +2

Query: 38  TYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFKDL 217
           T++ L+   CK   + +A  ++     + I  D+ TYN L+DG C    +  A+++F  +
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341

Query: 218 LIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEKGE 394
             +G   NV +YT +I GLC   + D+A+ L  +M     IPNVVTY  +I  L + G+
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/137 (30%), Positives = 73/137 (53%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           +H +     I+ +N +L +L K +H   A++L ++++  GI  D +T+NILI+   + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
              +  VF  +L KG++ N  T+  +I+GLC KG   +AL    K+   G   + V+Y  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 365 IILALFEKGENDKAEKL 415
           +I  L + G    A +L
Sbjct: 181 LINGLCKVGRITAALQL 197



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/123 (30%), Positives = 62/123 (50%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           +M   G  +D  T+N L++   +      + ++  KI  +G  P+  T+N LI GLC  G
Sbjct: 95  QMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKG 154

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
            +  A      ++ +G++L+  +Y  +I GLC  G    AL LL +++     PN V Y 
Sbjct: 155 HIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 214

Query: 362 III 370
           +II
Sbjct: 215 MII 217



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/131 (29%), Positives = 62/131 (47%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   + +T+N+L+  LC   H+ +A+    K+  QG   D  +Y  LI+GLCK GR+  
Sbjct: 134 KGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 193

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIIL 373
           A ++ K +  K    N   Y  +I  +C   L + A  L S+M      P+  T   +I 
Sbjct: 194 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIY 253

Query: 374 ALFEKGENDKA 406
                G+  +A
Sbjct: 254 GFCIMGQLKEA 264



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/112 (27%), Positives = 59/112 (52%)
 Frame = +2

Query: 35  VTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFKD 214
           V YN ++  +CK + ++ A  L  ++  + I PD +T N LI G C  G+L+ A  +   
Sbjct: 211 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHK 270

Query: 215 LLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
           ++++  N  +YT++ ++   C +G   +A  +L        I +VVTY  ++
Sbjct: 271 MILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322


>ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494820|gb|AES76023.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  218 bits (556), Expect = 3e-55
 Identities = 101/138 (73%), Positives = 120/138 (86%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EMHDRGQP +IVTY+S+L  LCKN H+DKAIAL+  +KDQGI+PD+YTY ILI GLC+ G
Sbjct: 401 EMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSG 460

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           RL++AQ VF+DLL+KGYNL+VY YT +IQG C+KG FDKALALLSKMEDNGCIPN  TYE
Sbjct: 461 RLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYE 520

Query: 362 IIILALFEKGENDKAEKL 415
           ++IL+LFEK END AEKL
Sbjct: 521 LVILSLFEKDENDTAEKL 538



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/137 (32%), Positives = 84/137 (61%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           M   G   ++  Y ++++  CK + +D+AI L ++++ + I P++ TY+ LIDGLCK GR
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
           +  A ++  ++  +G   N+ TY++++  LC     DKA+ALL+ ++D G  P++ TY I
Sbjct: 392 IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI 451

Query: 365 IILALFEKGENDKAEKL 415
           +I  L + G  + A+ +
Sbjct: 452 LIKGLCQSGRLEDAQNV 468



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/129 (32%), Positives = 68/129 (52%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           ++ T+N L+   CK   ++ A  ++  +    I+PD+ TYN L+DG C   ++  A+++F
Sbjct: 270 NVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEK 388
             +   G   NV  YT ++ G C   + D+A+ L  +M     IPNVVTY  +I  L + 
Sbjct: 330 DSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKL 389

Query: 389 GENDKAEKL 415
           G    A KL
Sbjct: 390 GRIFYALKL 398



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/132 (28%), Positives = 76/132 (57%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   D V+Y +L++ LCK   +  A+ L+K++  + +QP+   YN++ID +CK   + +
Sbjct: 160 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVND 219

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIIL 373
           A +++  ++ K    +V+TY A+I G       + A+ L +KM+     PNV T+ I++ 
Sbjct: 220 AFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279

Query: 374 ALFEKGENDKAE 409
              ++G+ + A+
Sbjct: 280 GFCKEGKVNDAK 291



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/112 (31%), Positives = 62/112 (55%)
 Frame = +2

Query: 35  VTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFKD 214
           V YN ++  +CK + ++ A  L  ++  + I PD++TYN LI G     +L  A ++F  
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261

Query: 215 LLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
           +  +  N NVYT+  ++ G C +G  + A  +L+ M  +   P+VVTY  ++
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/119 (31%), Positives = 59/119 (49%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G     +T+N+L+  LC   H+ +A+    K+  QG   D  +Y  LI+GLCK GR+  
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 184

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
           A ++ K +  K    N   Y  +I  +C   L + A  L S+M      P+V TY  +I
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/123 (30%), Positives = 61/123 (49%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           +M   G  +D  T+N L++   +      + ++  KI  +G  P   T+N LI GLC  G
Sbjct: 86  QMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKG 145

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
            +  A      ++ +G++L+  +Y  +I GLC  G    AL LL +++     PN V Y 
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205

Query: 362 III 370
           +II
Sbjct: 206 MII 208



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/125 (31%), Positives = 68/125 (54%)
 Frame = +2

Query: 41  YNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFKDLL 220
           +N +L +L K +H   A++L ++++  GI+ D +T+NILI+   + G    +  +F  +L
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 221 IKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEKGEND 400
            KGY+    T+  +I+GLC KG   +AL    K+   G   + V+Y  +I  L + G   
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 401 KAEKL 415
            A +L
Sbjct: 184 AALQL 188


>ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495192|gb|AES76395.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/138 (73%), Positives = 118/138 (85%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EMHDRG P D +TYNS+L  LCKN  +DKAIAL+ K+KD+GIQPD+YTY ILIDGLCK G
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           RL++AQ +F+DLL+KGYN+ VYTYT +IQG C+  LFDKALALLSKMEDNGCIPN  TYE
Sbjct: 456 RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYE 515

Query: 362 IIILALFEKGENDKAEKL 415
           IIIL+LFEK END AEKL
Sbjct: 516 IIILSLFEKDENDMAEKL 533



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/138 (34%), Positives = 78/138 (56%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EM  +G   D+VTY++L+   C    L+ AI L  K+  + I PD+YT++IL+DG CK G
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEG 280

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           R++ A+ V   ++ +G   +V TY +++ G C     +KA ++ + M   G   NV +Y 
Sbjct: 281 RVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYN 340

Query: 362 IIILALFEKGENDKAEKL 415
           I+I    +  + D+A  L
Sbjct: 341 IMINGFCKIKKVDEAMNL 358



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/134 (33%), Positives = 75/134 (55%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           M  +G   D+VTY SL+   C  + ++KA ++   +   G+  ++ +YNI+I+G CK  +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
           +  A  +FK++  K    +V TY ++I GLC  G    AL L+ +M D G   + +TY  
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411

Query: 365 IILALFEKGENDKA 406
           I+ AL +  + DKA
Sbjct: 412 ILDALCKNHQVDKA 425



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/110 (33%), Positives = 69/110 (62%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           ++V YN+++ ++CK + +++A  L  ++  +GI PD+ TY+ LI G C  G+L +A  +F
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTY 358
             ++ +  N +VYT++ ++ G C +G   +A  +L+ M   G  P+VVTY
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTY 304



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/127 (29%), Positives = 74/127 (58%)
 Frame = +2

Query: 35  VTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFKD 214
           V Y +L++ LCK      A+ L++++  + +QP++  YN +ID +CK   +  A +++ +
Sbjct: 162 VCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 221

Query: 215 LLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEKGE 394
           ++ KG + +V TY+A+I G C  G  + A+ L +KM      P+V T+ I++    ++G 
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281

Query: 395 NDKAEKL 415
             +A+ +
Sbjct: 282 VKEAKNV 288



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/129 (32%), Positives = 68/129 (52%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           D+ T++ L+   CK   + +A  ++  +  QGI+PD+ TY  L+DG C   ++  A+ +F
Sbjct: 265 DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEK 388
             +   G   NV +Y  +I G C     D+A+ L  +M     IP+VVTY  +I  L + 
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384

Query: 389 GENDKAEKL 415
           G+   A KL
Sbjct: 385 GKISYALKL 393



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/123 (32%), Positives = 62/123 (50%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EM   G  +D+VT+N L++   +  H   + ++   I  +G +P+  T   LI GLC  G
Sbjct: 81  EMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKG 140

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           ++  A      ++  G++LN   Y  +I GLC  G    AL LL +++     PNVV Y 
Sbjct: 141 QIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 200

Query: 362 III 370
            II
Sbjct: 201 TII 203



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/128 (34%), Positives = 66/128 (51%)
 Frame = +2

Query: 32  IVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVFK 211
           I  +  +L +L K      AI+L ++++  GI  DL T+NILI+   + G    +  VF 
Sbjct: 56  IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFA 115

Query: 212 DLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEKG 391
           ++L KGY  N  T T +I+GLC KG   +AL    K+   G   N V Y  +I  L + G
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 392 ENDKAEKL 415
           +   A +L
Sbjct: 176 QTSAALQL 183



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/119 (29%), Positives = 58/119 (48%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   + +T  +L+  LC    + +A+    K+   G   +   Y  LI+GLCK G+   
Sbjct: 120 KGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSA 179

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
           A ++ + +  K    NV  Y  +I  +C   L ++A  L S+M   G  P+VVTY  +I
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238


>ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483917|gb|AES65120.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  215 bits (548), Expect = 3e-54
 Identities = 95/138 (68%), Positives = 122/138 (88%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EMHDRGQP++I+TYNS+L  +CKN H+DKAI L+ KIK++GIQPD++TY +LI+GLCK G
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVG 457

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           RL +AQ+VF+DLL+KGY+ N+YTYT++I G CNKG FD+ LA+LSKM+DNGCIPN +TYE
Sbjct: 458 RLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYE 517

Query: 362 IIILALFEKGENDKAEKL 415
           I+I +LFEK ENDKAEKL
Sbjct: 518 ILIHSLFEKDENDKAEKL 535



 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/137 (33%), Positives = 84/137 (61%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           M  RG   D+ +Y+ +++  CK + +D+A+ L +++  + I P++ TYN L+DGLCK GR
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
              A E+  ++  +G   N+ TY +++  +C     DKA+ LL+K+++ G  P++ TY +
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448

Query: 365 IILALFEKGENDKAEKL 415
           +I  L + G  D A+K+
Sbjct: 449 LINGLCKVGRLDDAQKV 465



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/126 (35%), Positives = 76/126 (60%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           D+VTYNSL+   C  + ++KA +L   +  +G+ PD+++Y+I+I+G CK   +  A ++F
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEK 388
           +++  K    NV TY +++ GLC  G    AL L+ +M D G   N++TY  I+ A+ + 
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421

Query: 389 GENDKA 406
              DKA
Sbjct: 422 NHVDKA 427



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/138 (34%), Positives = 76/138 (55%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EM  +    D+VTY+SL+   C    L  A+ L  ++    I P++YT++ILIDG CK G
Sbjct: 223 EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG 282

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           +++ A+ V   ++ K   L+V TY +++ G C     +KA +L + M   G  P+V +Y 
Sbjct: 283 KVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYS 342

Query: 362 IIILALFEKGENDKAEKL 415
           I+I    +    D+A KL
Sbjct: 343 IMINGFCKIKMVDEAMKL 360



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/114 (30%), Positives = 68/114 (59%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           ++V Y++++ ++CK++ ++ A  L  ++  + I PD+ TY+ LI G C  G+L+ A ++F
Sbjct: 197 NVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLF 256

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
             ++    N NVYT++ +I G C +G   +A  +L+ M       +VVTY  ++
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLM 310



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/134 (26%), Positives = 79/134 (58%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   D V+Y +L++ LC+      A+ L++++  + ++P++  Y+ +ID +CK   + +
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVND 216

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIIL 373
           A +++ +++ K  + +V TY+++I G C  G    A+ L ++M  +   PNV T+ I+I 
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276

Query: 374 ALFEKGENDKAEKL 415
              ++G+  +A+ +
Sbjct: 277 GFCKEGKVREAKNV 290



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/137 (29%), Positives = 72/137 (52%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           +H        + +  +L +L K +    A++L ++++  GI+PD  T N+L++   + G 
Sbjct: 49  LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
           ++ +  VF  +L KGY+ +  T+T +I+GLC KG   KAL    K+   G   + V+Y  
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 365 IILALFEKGENDKAEKL 415
           +I  L   GE   A +L
Sbjct: 169 LINGLCRVGETKAAVQL 185



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/123 (31%), Positives = 62/123 (50%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           +M   G   D +T N L++   +  H+  + ++  KI  +G  PD  T+ ILI GLC  G
Sbjct: 83  QMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKG 142

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
            +  A      ++ +G+ L+  +Y  +I GLC  G    A+ LL +++     PNVV Y 
Sbjct: 143 EVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYS 202

Query: 362 III 370
            II
Sbjct: 203 TII 205



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/129 (27%), Positives = 69/129 (53%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           ++ T++ L+   CK   + +A  ++  +  + ++ D+ TYN L+DG C   ++  A+ +F
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILALFEK 388
             +  +G   +V++Y+ +I G C   + D+A+ L  +M      PNVVTY  ++  L + 
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386

Query: 389 GENDKAEKL 415
           G    A +L
Sbjct: 387 GRTSCALEL 395



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/119 (31%), Positives = 59/119 (49%)
 Frame = +2

Query: 14  RGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQN 193
           +G   D VT+  L+  LC    + KA+    K+  QG Q D  +Y  LI+GLC+ G  + 
Sbjct: 122 KGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKA 181

Query: 194 AQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIII 370
           A ++ + +  K    NV  Y+ +I  +C   L + A  L  +M      P+VVTY  +I
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240


>ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495144|gb|AES76347.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  209 bits (532), Expect = 2e-52
 Identities = 97/138 (70%), Positives = 118/138 (85%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EMHDRG P DI+TY+S+L  LCKN  +DKAIAL+ K+KDQGI+P++YTY ILIDGLCK G
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           RL++A  +F+DLL+KGYN+ V TYT +I G CNKGLFD+ALALLSKM+DN CIP+ VTYE
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYE 516

Query: 362 IIILALFEKGENDKAEKL 415
           III +LF+K ENDKAEKL
Sbjct: 517 IIIRSLFDKDENDKAEKL 534



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/134 (36%), Positives = 80/134 (59%)
 Frame = +2

Query: 5   MHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGR 184
           M  +G   ++VTY SL+   C  + ++KA +++  +  +G+ PD+ +YNILIDG CK  +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352

Query: 185 LQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEI 364
           +  A  +FK++  K    +V TY ++I GLC  G    AL L+ +M D G  P+++TY  
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412

Query: 365 IILALFEKGENDKA 406
           I+ AL +  + DKA
Sbjct: 413 ILDALCKNHQVDKA 426



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/138 (33%), Positives = 78/138 (56%)
 Frame = +2

Query: 2   EMHDRGQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCG 181
           EM  +G   ++VTY++L+        L  AI L  K+  + I+PD+YT+NIL+DG CK G
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 281

Query: 182 RLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYE 361
           +++  + VF  ++ +G   NV TY +++ G C     +KA ++L  M   G  P++ +Y 
Sbjct: 282 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYN 341

Query: 362 IIILALFEKGENDKAEKL 415
           I+I    +  + D+A  L
Sbjct: 342 ILIDGFCKIKKVDEAMNL 359



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/110 (30%), Positives = 66/110 (60%)
 Frame = +2

Query: 29  DIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNAQEVF 208
           ++V Y++++  +CK++H++ A  L  ++  +GI P++ TY+ LI G    G+L++A ++F
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255

Query: 209 KDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTY 358
             ++++    +VYT+  ++ G C  G   +   + + M   G  PNVVTY
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/126 (30%), Positives = 71/126 (56%)
 Frame = +2

Query: 17  GQPTDIVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLYTYNILIDGLCKCGRLQNA 196
           G   D V Y +L+H LCK      A+ L++++    +QP++  Y+ +IDG+CK   + +A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 197 QEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKMEDNGCIPNVVTYEIIILA 376
            +++ +++ KG + NV TY+A+I G    G    A+ L +KM      P+V T+ I++  
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 377 LFEKGE 394
             + G+
Sbjct: 277 FCKDGK 282



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
 Frame = +2

Query: 14  RGQPTD-IVTYNSLLHTLCKNRHLDKAIALVKKIKDQGIQPDLY---------------- 142
           R  PT   + +N +L +L K++H    ++L ++++ +GI P L+                
Sbjct: 69  RQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTI 128

Query: 143 TYNILIDGLCKCGRLQNAQEVFKDLLIKGYNLNVYTYTAVIQGLCNKGLFDKALALLSKM 322
           T+  LI GLC  G++  A     +++  G+ L+   Y  +I GLC  G    AL LL ++
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 323 EDNGCIPNVVTYEIII 370
           + N   PNVV Y  II
Sbjct: 189 DGNLVQPNVVMYSTII 204