BLASTX nr result

ID: Glycyrrhiza23_contig00011861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011861
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47689.1| unknown [Lotus japonicus]                              216   4e-88
ref|NP_001240859.1| uncharacterized protein LOC100812152 [Glycin...   216   2e-87
dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]     211   1e-85
ref|XP_003554417.1| PREDICTED: histone deacetylase HDT1-like [Gl...   204   3e-82
gb|ABK93977.1| unknown [Populus trichocarpa]                          151   6e-55

>gb|AFK47689.1| unknown [Lotus japonicus]
          Length = 315

 Score =  216 bits (550), Expect(2) = 4e-88
 Identities = 118/192 (61%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
 Frame = +1

Query: 82  MEFWGVEVKSGEPLKVDPGDDKIVHLSMACLGEVNK--GSEPVSLYVKFGNQKLVLGTLS 255
           MEFWGVEVKSGE LKVDP DDKIVHLSMACLG+V+K  GSE VS+YVKFG+QKL LGTLS
Sbjct: 1   MEFWGVEVKSGESLKVDPEDDKIVHLSMACLGDVSKDKGSEAVSVYVKFGDQKLALGTLS 60

Query: 256 SEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLV-XXXXXXXXXXXXXXIPVNA 432
           ++K+PQISYDLIFEKEFELSHNWK+GSVFFTGFKAESQ V               IP++ 
Sbjct: 61  ADKYPQISYDLIFEKEFELSHNWKHGSVFFTGFKAESQAVSDGDDEDSDDSDGEDIPISV 120

Query: 433 ANGKPEFEVKNGIKPDANKAKQKEKIADPXXXXXXXXXXANGEGEKXXXXXXXXXXXXXX 612
           +NGKPE EVKN  KP+AN+AKQKEKI D           A  E E+              
Sbjct: 121 SNGKPEIEVKNSAKPNANEAKQKEKITDLKKNENNKGKAAIAEDEE-DSSGSDTDNTSED 179

Query: 613 XPMANGQIESSE 648
            PM NG ++SSE
Sbjct: 180 EPMPNGGVDSSE 191



 Score =  136 bits (342), Expect(2) = 4e-88
 Identities = 67/96 (69%), Positives = 71/96 (73%)
 Frame = +3

Query: 768  KKAEGSNKRVAESSKKTPVPVKKAKFITPEKTGGKNSGHVATPYPSXXXXXXXXXXXXPV 947
            KKAEGS KRV +S K TPVPVKKAKF+TP+KT  KN  HVATPYP             P 
Sbjct: 219  KKAEGSKKRVLDSPKNTPVPVKKAKFVTPQKTDSKNVAHVATPYPKQAGKASASTKQ-PA 277

Query: 948  TQQTPKSGGDYSCKPCNRSFKTEDALNSHNKAKHSA 1055
              QTPKSGG+YSCKPCNRSFKTEDAL SHNKAKHSA
Sbjct: 278  KPQTPKSGGEYSCKPCNRSFKTEDALGSHNKAKHSA 313


>ref|NP_001240859.1| uncharacterized protein LOC100812152 [Glycine max]
           gi|255638252|gb|ACU19439.1| unknown [Glycine max]
          Length = 288

 Score =  216 bits (551), Expect(2) = 2e-87
 Identities = 122/191 (63%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
 Frame = +1

Query: 82  MEFWGVEVKSGEPLKVDPGDDKIVHLSMACLGEVNKGSE--PVSLYVKFGNQKLVLGTLS 255
           MEFWGVEVKSGE LKVDPGDDKI+HLS ACLG+V K  E  PV+LYVKFGNQKLVLGTLS
Sbjct: 1   MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60

Query: 256 SEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLVXXXXXXXXXXXXXXIPVNAA 435
           SE FPQISYDL+FEKEFELSHNWK+GSVFFTGFKA+SQ                IPV+AA
Sbjct: 61  SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQ-SESDNDEDSDDFDEDIPVSAA 119

Query: 436 NGKPEFEVKNGIKPDANKAKQKEKIADPXXXXXXXXXXANGEGEKXXXXXXXXXXXXXXX 615
           NGKPE EVKNGIKPDAN+AKQK+               ANGE E                
Sbjct: 120 NGKPEIEVKNGIKPDANEAKQKK--------------IANGEDEDSSESESDDDSSEDQL 165

Query: 616 PMANGQIESSE 648
             ANG IESSE
Sbjct: 166 -TANGDIESSE 175



 Score =  133 bits (335), Expect(2) = 2e-87
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +3

Query: 768  KKAEGSNKRVAESSKKTPVPVKKAKFITPEKTGGKNSGHVATPYPSXXXXXXXXXXXXPV 947
            KK E SNKR  +SSKKTPVPVKK KF+TP+KT  KN  HVATP+PS              
Sbjct: 196  KKIEASNKRGIDSSKKTPVPVKKTKFVTPQKTDSKNVVHVATPHPSKQTGKATANNK--- 252

Query: 948  TQQTPKSGGDYSCKPCNRSFKTEDALNSHNKAKHSAK 1058
             QQTPKSGGDYSCKPCNRSFKTEDAL+SHNKAKHS K
Sbjct: 253  -QQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKHSTK 288


>dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]
          Length = 304

 Score =  211 bits (536), Expect(2) = 1e-85
 Identities = 113/191 (59%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
 Frame = +1

Query: 82  MEFWGVEVKSGEPLKVDPGDDKIVHLSMACLGEVNK--GSEPVSLYVKFGNQKLVLGTLS 255
           MEFWG EVKSGE LKV+P DDKI+HLS ACLGEV+K  G EPVSLYVK  NQKL LGTLS
Sbjct: 1   MEFWGTEVKSGESLKVEPEDDKIIHLSAACLGEVSKDKGGEPVSLYVKIDNQKLQLGTLS 60

Query: 256 SEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLVXXXXXXXXXXXXXXIPVNAA 435
           SEK PQIS+DL+FEKEFELSHNWK GS+FFTGFK ES LV               PVNAA
Sbjct: 61  SEKIPQISFDLVFEKEFELSHNWKYGSIFFTGFKMESLLVSDDDEDSDDSIEEDNPVNAA 120

Query: 436 NGKPEFEVKNGIKPDANKAKQKEKIADPXXXXXXXXXXANGEGEKXXXXXXXXXXXXXXX 615
           NGKPE EVKNG KP  N+A Q+ K +DP           + + E+               
Sbjct: 121 NGKPEVEVKNGAKPGVNEA-QQNKTSDPKKKQKDIENDVSADDEEDSSETDSDEDSSEDE 179

Query: 616 PMANGQIESSE 648
           P+ANGQIESS+
Sbjct: 180 PVANGQIESSD 190



 Score =  133 bits (335), Expect(2) = 1e-85
 Identities = 67/97 (69%), Positives = 71/97 (73%)
 Frame = +3

Query: 768  KKAEGSNKRVAESSKKTPVPVKKAKFITPEKTGGKNSGHVATPYPSXXXXXXXXXXXXPV 947
            KK EG  KRVAESSKKTPV VK+AKF TPEKTG KN  HV TPYP             P+
Sbjct: 209  KKTEGGTKRVAESSKKTPVAVKRAKFATPEKTGSKNGVHVDTPYPK-QTVKSGANNKPPM 267

Query: 948  TQQTPKSGGDYSCKPCNRSFKTEDALNSHNKAKHSAK 1058
             QQTP+S GDYSCKPC RSFKTEDAL SHN+AKHSAK
Sbjct: 268  KQQTPQSTGDYSCKPCKRSFKTEDALGSHNRAKHSAK 304


>ref|XP_003554417.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
          Length = 293

 Score =  204 bits (519), Expect(2) = 3e-82
 Identities = 117/191 (61%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
 Frame = +1

Query: 82  MEFWGVEVKSGEPLKVDPGDDKIVHLSMACLGEVNK--GSEPVSLYVKFGNQKLVLGTLS 255
           MEFWGVEVK+GE LKVDPGDDKI+HLS AC+G+V K  G  PV+LYVKFGNQK VLGTLS
Sbjct: 1   MEFWGVEVKNGESLKVDPGDDKIIHLSNACMGDVTKDIGGGPVALYVKFGNQKFVLGTLS 60

Query: 256 SEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLVXXXXXXXXXXXXXXIPVNAA 435
           S+KFPQISYDL+FEKEFELSHNWK GSVFFTGFKA+ Q                IPV+A 
Sbjct: 61  SDKFPQISYDLVFEKEFELSHNWKYGSVFFTGFKAQPQ-SESDDDEDSDDIDEDIPVSAV 119

Query: 436 NGKPEFEVKNGIKPDANKAKQKEKIADPXXXXXXXXXXANGEGEKXXXXXXXXXXXXXXX 615
           NGKPE     G+KPDAN+AKQK KIADP          ANGE +                
Sbjct: 120 NGKPEV----GVKPDANEAKQK-KIADP------RKRDANGE-DDDSSESDSDDDSSEDK 167

Query: 616 PMANGQIESSE 648
           P ANG IESSE
Sbjct: 168 PTANGDIESSE 178



 Score =  128 bits (322), Expect(2) = 3e-82
 Identities = 65/97 (67%), Positives = 70/97 (72%)
 Frame = +3

Query: 768  KKAEGSNKRVAESSKKTPVPVKKAKFITPEKTGGKNSGHVATPYPSXXXXXXXXXXXXPV 947
            KK E SNKR  ESSKKTPVPVKK KF+TP+KT  KN  H ATP+PS              
Sbjct: 201  KKIEASNKRGIESSKKTPVPVKKTKFVTPQKTDSKNVVHAATPHPSKQAGKATANNKL-- 258

Query: 948  TQQTPKSGGDYSCKPCNRSFKTEDALNSHNKAKHSAK 1058
              Q+PKSGGDYSCKPCNR FKTEDAL+SHNKAKHSAK
Sbjct: 259  --QSPKSGGDYSCKPCNRLFKTEDALSSHNKAKHSAK 293


>gb|ABK93977.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  151 bits (381), Expect(2) = 6e-55
 Identities = 91/196 (46%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
 Frame = +1

Query: 82  MEFWGVEVKSGEPLKVDPGDDKIVHLSMACLGEV--NKGSEPVSLYVKFGNQKLVLGTLS 255
           MEFWGVEVK GEPL+V+ GD  I+HLS ACLGE   +KG+E V L+V F +QKLVLGTLS
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 256 SEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLVXXXXXXXXXXXXXXIPVNAA 435
            EK PQI +DL+FEK+FELSHN KNGSVFF+G+K                    +PV+  
Sbjct: 61  HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQPESDSDEFISDGEEDLPVPVD-- 118

Query: 436 NGK-----PEFEVKNGIKPDANKAKQKEKIADPXXXXXXXXXXANGEGEKXXXXXXXXXX 600
           NGK     P+ E +N  KPD   +KQK KI +P           +   E+          
Sbjct: 119 NGKEEAKQPKPENENAAKPD---SKQKVKIVEPNKDGKPKPENDDSSDEEDDSSDDGESS 175

Query: 601 XXXXXPMANGQIESSE 648
                 MAN + ESSE
Sbjct: 176 DDQAMMMANDEDESSE 191



 Score = 90.9 bits (224), Expect(2) = 6e-55
 Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = +3

Query: 768  KKAEGSNKRVAESSKKTPVPVKKAKFITPEKTGGKNSG-HVATPYPSXXXXXXXXXXXXP 944
            KKAE   KR AES+ K PVP KKAKF+TP+KT  K +G H+ATP+PS             
Sbjct: 213  KKAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSAN---- 268

Query: 945  VTQQTPKSGGDYSCKPCNRSFKTEDALNSHNKAKHSA 1055
             +Q+  ++   +SC  CNRSF +E+AL SH+KAKHSA
Sbjct: 269  -SQRKEQAQKSFSCNSCNRSFGSENALQSHSKAKHSA 304


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