BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011849
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   481   e-133
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   476   e-132
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca...   459   e-127
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   454   e-125
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   440   e-121

>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  481 bits (1237), Expect = e-133
 Identities = 241/271 (88%), Positives = 245/271 (90%), Gaps = 4/271 (1%)
 Frame = -1

Query: 1158 QKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGQFVNA 979
            QKGVCSQLWPDVDMPFSG TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL G+FV+A
Sbjct: 903  QKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962

Query: 978  TPFVDGTEKPG----SKSGSLVDDLGLELRKKGFNYHGLEVLYSGVYGTELMCEIFIGPV 811
            TPF     K      SKSGSLVDDLGL LR+KGFNYHGLEVLYSGVYGTEL CEIFIGPV
Sbjct: 963  TPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022

Query: 810  YYQRLRHMVSDKFQVRSTGTIDQVTRQPXXXXXXXXXXRFGEMERDSLLAHGAAYLLHDR 631
            YYQRLRHMVSDKFQVRSTGTIDQVTRQP          RFGEMERDSLLAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082

Query: 630  LHTCSDYHIADVCSLCGSMLTTTFIQPQKRPVREIGGLPPGRAPRKVTCHACQTSKGMET 451
            LHTCSDYHIADVCSLCGSML TTFIQPQKRPVREIGGLPPGRAP+KVTCHACQTSKGMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMET 1142

Query: 450  VAMPYVFRYLAAELAAMNIKMTLKLSDGAGV 358
            VAMPYVFRYLAAELAAMNIKMTLKLSDGAGV
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLKLSDGAGV 1173


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  476 bits (1225), Expect = e-132
 Identities = 238/270 (88%), Positives = 244/270 (90%), Gaps = 4/270 (1%)
 Frame = -1

Query: 1158 QKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGQFVNA 979
            QKGVCSQLWPDVDMPFSG TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL G+FV+A
Sbjct: 903  QKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962

Query: 978  TPFVDGTEKPG----SKSGSLVDDLGLELRKKGFNYHGLEVLYSGVYGTELMCEIFIGPV 811
            TPF    +K      S SGS+VDDLGL LR+KGFNYHGLEVLYSGVYGTEL CEIFIGPV
Sbjct: 963  TPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022

Query: 810  YYQRLRHMVSDKFQVRSTGTIDQVTRQPXXXXXXXXXXRFGEMERDSLLAHGAAYLLHDR 631
            YYQRLRHMVSDKFQVRSTGTIDQVTRQP          RFGEMERDSLLAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082

Query: 630  LHTCSDYHIADVCSLCGSMLTTTFIQPQKRPVREIGGLPPGRAPRKVTCHACQTSKGMET 451
            LHTCSDYHIADVCSLCGSMLTTTF QPQKRPVREIGGLPPGRAP+KVTCHACQTSKGMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMET 1142

Query: 450  VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 361
            VAMPYVFRYLAAELAAMNIKMTLKLSDGAG
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 1172


>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1341

 Score =  459 bits (1180), Expect = e-127
 Identities = 225/267 (84%), Positives = 241/267 (90%)
 Frame = -1

Query: 1158 QKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGQFVNA 979
            QKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHG+F +A
Sbjct: 1071 QKGVCSQLWPDIDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDA 1130

Query: 978  TPFVDGTEKPGSKSGSLVDDLGLELRKKGFNYHGLEVLYSGVYGTELMCEIFIGPVYYQR 799
            TPF    E PGSKS SLVD+LG  L++KGFNYHG EVLYSGVYGTEL CEIFIGPVYYQR
Sbjct: 1131 TPFRSSVE-PGSKSASLVDELGDMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQR 1189

Query: 798  LRHMVSDKFQVRSTGTIDQVTRQPXXXXXXXXXXRFGEMERDSLLAHGAAYLLHDRLHTC 619
            LRHMVSDK+QVRSTGT+DQ+TRQP          RFGEMERDSLLAHGAAYLLHDRLHTC
Sbjct: 1190 LRHMVSDKYQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1249

Query: 618  SDYHIADVCSLCGSMLTTTFIQPQKRPVREIGGLPPGRAPRKVTCHACQTSKGMETVAMP 439
            SDYHIADVCS+CGSML+TTFI+PQKRPVR+I G+P  RAPRKVTCHACQTSKGMETVAMP
Sbjct: 1250 SDYHIADVCSICGSMLSTTFIEPQKRPVRDIPGIPVRRAPRKVTCHACQTSKGMETVAMP 1309

Query: 438  YVFRYLAAELAAMNIKMTLKLSDGAGV 358
            Y+FRYLAAELAAMNIKMTLKLS+GA V
Sbjct: 1310 YIFRYLAAELAAMNIKMTLKLSNGANV 1336


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  454 bits (1169), Expect = e-125
 Identities = 223/270 (82%), Positives = 240/270 (88%), Gaps = 4/270 (1%)
 Frame = -1

Query: 1158 QKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGQFVNA 979
            QKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHG+FV+A
Sbjct: 872  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDA 931

Query: 978  TPFVDGTEKP----GSKSGSLVDDLGLELRKKGFNYHGLEVLYSGVYGTELMCEIFIGPV 811
            TPF D   K     GS+S SLVD+LG  L   GFNYHG+EVLYSG YGTEL CEIFIGPV
Sbjct: 932  TPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPV 991

Query: 810  YYQRLRHMVSDKFQVRSTGTIDQVTRQPXXXXXXXXXXRFGEMERDSLLAHGAAYLLHDR 631
            YYQRLRHMVSDKFQVRSTGT+DQVTRQP          RFGEMERDS+LAHGAAYLLHDR
Sbjct: 992  YYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDR 1051

Query: 630  LHTCSDYHIADVCSLCGSMLTTTFIQPQKRPVREIGGLPPGRAPRKVTCHACQTSKGMET 451
            LHTCSD+HIADVCSLCGS+LTT+ IQPQKR VREIGGLPPGRAP+KVTCHACQTSKGMET
Sbjct: 1052 LHTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMET 1111

Query: 450  VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 361
            V+MPY+FR+LAAELAAMNIKMTL+LS+GAG
Sbjct: 1112 VSMPYIFRFLAAELAAMNIKMTLQLSNGAG 1141


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 719

 Score =  440 bits (1131), Expect = e-121
 Identities = 215/270 (79%), Positives = 236/270 (87%), Gaps = 5/270 (1%)
 Frame = -1

Query: 1158 QKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGQFVNA 979
            QKGVCSQLWPDVDMPF GATGMRPDLIINPHAFPSRMTIAML+ESVAAKGG L+G+FVNA
Sbjct: 449  QKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNA 508

Query: 978  TPFVDGTEKPGS-----KSGSLVDDLGLELRKKGFNYHGLEVLYSGVYGTELMCEIFIGP 814
            TPF     K  +        +LVD+LG  L KKGFNYHGLEVLYSGVYGTEL CEIFIGP
Sbjct: 509  TPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGP 568

Query: 813  VYYQRLRHMVSDKFQVRSTGTIDQVTRQPXXXXXXXXXXRFGEMERDSLLAHGAAYLLHD 634
            VYYQRLRHMVSDK+QVRSTGT+DQVTRQP          RFGEMERDS+LAHGA+YLLHD
Sbjct: 569  VYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHD 628

Query: 633  RLHTCSDYHIADVCSLCGSMLTTTFIQPQKRPVREIGGLPPGRAPRKVTCHACQTSKGME 454
            RLHTCSD+HIADVCSLCGS+LT++F+QP KR VREIGGLPPG+AP++VTCHAC+TSKGME
Sbjct: 629  RLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGME 688

Query: 453  TVAMPYVFRYLAAELAAMNIKMTLKLSDGA 364
            TVAMPYVF+YLAAELAAMNIKMTL+LS GA
Sbjct: 689  TVAMPYVFKYLAAELAAMNIKMTLQLSSGA 718