BLASTX nr result

ID: Glycyrrhiza23_contig00011840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011840
         (1559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi...   385   e-104
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   377   e-102
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   374   e-101
ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi...   306   7e-81
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   303   6e-80

>ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1|
            RING finger protein [Medicago truncatula]
          Length = 369

 Score =  385 bits (988), Expect = e-104
 Identities = 202/287 (70%), Positives = 213/287 (74%), Gaps = 7/287 (2%)
 Frame = -1

Query: 1559 EEIHADPSPQHRLSPFPDDPIXXXXXXXXXXXXXXXXXSPFNPVIVLRXXXXXXXXXXXX 1380
            EEI A  SP HRLSPFP D +                 SPFNPVIVLR            
Sbjct: 40   EEIAAGESPHHRLSPFPADTVSSRRQGFRRRRRDAGSRSPFNPVIVLRGAGDDGVGEDGA 99

Query: 1379 XA----FELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASK 1212
             A    FELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIE+NGFGRPENPPASK
Sbjct: 100  GAGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASK 159

Query: 1211 AAIESMPTVEIGEAQVGADEHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCP 1032
            AAIESMPTVEI E  V  + HCAVCKE FE+  EARELPCKH+YHSDCILPWL+VRNSCP
Sbjct: 160  AAIESMPTVEICEEHVSCELHCAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCP 219

Query: 1031 VCRHELPSD-HSPLENRVSGQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYT 855
            VCRHELPSD ++PLE RVSGQIDEEAIGLTIWRLP               GESHFPVVYT
Sbjct: 220  VCRHELPSDLNNPLETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYT 279

Query: 854  EMDGGLNA--NGAPRRITRTVRSHRVRESRGFGRVFRNVLSFFGRLG 720
            EMDGGLNA    APRRI+RTVR+HRVRES G GRVFRN  SFFGR+G
Sbjct: 280  EMDGGLNAAQGSAPRRISRTVRAHRVRESHGIGRVFRNFFSFFGRIG 326


>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  377 bits (967), Expect = e-102
 Identities = 198/286 (69%), Positives = 213/286 (74%), Gaps = 6/286 (2%)
 Frame = -1

Query: 1559 EEIHA--DPSPQHRLSPFPDDPIXXXXXXXXXXXXXXXXXS-PFNPVIVLRXXXXXXXXX 1389
            EEI A  + SP+HRLSPFPDDP+                   PFNPVIVLR         
Sbjct: 40   EEIRAGAEASPRHRLSPFPDDPLSFRRQGFRRRRREGAGNRSPFNPVIVLRGPGDDSAAA 99

Query: 1388 XXXXA--FELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPAS 1215
                A  FELFYDDGDG+GLRPLPPT+SEFLLGSGFDRLLEQF+Q+E+NGFGRPENPP S
Sbjct: 100  DHDGASTFELFYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFAQMEMNGFGRPENPPTS 159

Query: 1214 KAAIESMPTVEIGEAQVGADEHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSC 1035
            KAAIESMPTVEIGE  V  D HCAVCKE FE+  EARELPCKHIYHS+CILPWLS+RNSC
Sbjct: 160  KAAIESMPTVEIGETHVETDAHCAVCKEVFELHAEARELPCKHIYHSECILPWLSMRNSC 219

Query: 1034 PVCRHELPSDHSPLENRVSGQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYT 855
            PVCRHELPSD   LE RV  QIDEEAIGLTIWRLP               GESH PVVYT
Sbjct: 220  PVCRHELPSD---LETRVPSQIDEEAIGLTIWRLPGGGFAVGRFSGGRRTGESHLPVVYT 276

Query: 854  EMDGGLNAN-GAPRRITRTVRSHRVRESRGFGRVFRNVLSFFGRLG 720
            EMDGGLN N GAPRRI+R+VRS+RVRESRGFGRVFRN  SFFGR+G
Sbjct: 277  EMDGGLNTNGGAPRRISRSVRSNRVRESRGFGRVFRNFFSFFGRIG 322


>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  374 bits (961), Expect = e-101
 Identities = 194/280 (69%), Positives = 208/280 (74%), Gaps = 4/280 (1%)
 Frame = -1

Query: 1547 ADPSPQHRLSPFPDDPIXXXXXXXXXXXXXXXXXS-PFNPVIVLRXXXXXXXXXXXXXA- 1374
            A+ SP+HRLSPFPDDP+                   PFNPVIVLR               
Sbjct: 48   AEASPRHRLSPFPDDPLLLRRQGFRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVS 107

Query: 1373 -FELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIES 1197
             FELFYDDGDG+GLRPLPPT+SE LLGSGFDRLLEQF+QIE+NGFGRPENPPASKAAIES
Sbjct: 108  TFELFYDDGDGTGLRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIES 167

Query: 1196 MPTVEIGEAQVGADEHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHE 1017
            MPTVEIGE  V  + HCAVCKEAFE+  EARELPCKHIYHSDCILPWLS+RNSCPVCRHE
Sbjct: 168  MPTVEIGETHVETEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHE 227

Query: 1016 LPSDHSPLENRVSGQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGL 837
            LPSD   LE RV  QIDEE IGLTIWRLP               GESHFPVVYTEMDGGL
Sbjct: 228  LPSD---LETRVPSQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMDGGL 284

Query: 836  NAN-GAPRRITRTVRSHRVRESRGFGRVFRNVLSFFGRLG 720
            N N GAPRRI+R+VRS+RVRESRGFGRV  N  SFFGR+G
Sbjct: 285  NTNGGAPRRISRSVRSNRVRESRGFGRVISNFFSFFGRIG 324


>ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi|87241270|gb|ABD33128.1|
            Zinc finger, RING-type; Thioredoxin-related [Medicago
            truncatula] gi|355486438|gb|AES67641.1| RING finger
            protein [Medicago truncatula] gi|388498558|gb|AFK37345.1|
            unknown [Medicago truncatula]
          Length = 355

 Score =  306 bits (785), Expect = 7e-81
 Identities = 155/251 (61%), Positives = 184/251 (73%), Gaps = 11/251 (4%)
 Frame = -1

Query: 1442 PFNPVIVLRXXXXXXXXXXXXXA-----------FELFYDDGDGSGLRPLPPTVSEFLLG 1296
            PFNPVIVLR             A           FEL+Y+D +G+ LRPLPP++SE LLG
Sbjct: 80   PFNPVIVLRGPREDTTAGVGADAGGGDSEGNTSSFELYYEDSNGTDLRPLPPSMSELLLG 139

Query: 1295 SGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGADEHCAVCKEAFEMG 1116
            SGFDRLLEQFSQIE+NGFGR ENPPASKAAIES+PTVEI ++++ ++ HCAVCKE FE+G
Sbjct: 140  SGFDRLLEQFSQIEINGFGRSENPPASKAAIESIPTVEITDSEMESEIHCAVCKEQFELG 199

Query: 1115 VEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDHSPLENRVSGQIDEEAIGLTIWR 936
             EAR++PC H+YHSDCILPWLS+RNSCPVCRHELPSD +  E+R+SGQIDEEA+GLTIWR
Sbjct: 200  SEARKMPCNHLYHSDCILPWLSMRNSCPVCRHELPSDQNASESRISGQIDEEAVGLTIWR 259

Query: 935  LPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNANGAPRRITRTVRSHRVRESRGFGRV 756
            LP               GE   P+VYTEMDG  N+N   RRI+ TV S+RVRE RG  R+
Sbjct: 260  LPGGGFAVGRFAGGRRAGEIQLPIVYTEMDGN-NSNEDSRRISLTVGSNRVRERRGIRRI 318

Query: 755  FRNVLSFFGRL 723
            FRN LSFFG +
Sbjct: 319  FRNFLSFFGNV 329


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449527992|ref|XP_004170991.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score =  303 bits (777), Expect = 6e-80
 Identities = 148/241 (61%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
 Frame = -1

Query: 1439 FNPVIVLRXXXXXXXXXXXXXA--FELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQF 1266
            FNPV+VLR                F+++YDDG GSGLRP+P T+SEFL+G+GFDRLLEQ 
Sbjct: 86   FNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQL 145

Query: 1265 SQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGADEHCAVCKEAFEMGVEARELPCKH 1086
            +Q+E+NGFGR ENPPASKAA+ESMPT+EI E+ V +D HCAVCKEAFE+G EARE+PCKH
Sbjct: 146  AQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKH 205

Query: 1085 IYHSDCILPWLSVRNSCPVCRHELPSDH-SPLENRVSGQIDEEAIGLTIWRLPXXXXXXX 909
            IYHS+CI+PWLS+RNSCPVCRHELPS+  SP        +DEE +GLTIWRLP       
Sbjct: 206  IYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVG 265

Query: 908  XXXXXXXXGESHFPVVYTEMDGGLNANGAPRRITRTVRSHRVRESRGFGRVFRNVLSFFG 729
                    GE   P VYTEMDGG N NG PRR++   R  R RESRG GR FRN+ SFFG
Sbjct: 266  RFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSWASRRSRGRESRGIGRTFRNIFSFFG 325

Query: 728  R 726
            R
Sbjct: 326  R 326


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