BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011821
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   277   6e-73
gb|AFN88216.1| pentatricopeptide repeat-containing protein [Phas...   255   3e-66
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   234   5e-60
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   233   9e-60
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   222   2e-56

>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  277 bits (709), Expect = 6e-73
 Identities = 133/150 (88%), Positives = 145/150 (96%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           NAVTLASILPACS+MGSMG ARQLHGFSIR FLE+NVYVGT+L DTYSK GAISYAENVF
Sbjct: 527 NAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVF 586

Query: 183 MRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLVD 362
           +RTPEKNSVTYTTMMM YGQHGMGK+ALTLYDSMLRSG++PDA+TFVAILSAC+Y+GLVD
Sbjct: 587 LRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVD 646

Query: 363 EGLQIFESMKKVHKIKPSIEHYCCVADILG 452
           EGLQIFESM+KVHKIKPSIEHYCCVAD+LG
Sbjct: 647 EGLQIFESMEKVHKIKPSIEHYCCVADMLG 676



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           ++VT  ++L A S + ++   +Q H + IR  ++    + + LID Y+KSG+I  AE +F
Sbjct: 425 DSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEG-MESYLIDMYAKSGSIRTAELLF 483

Query: 183 MR--TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 353
            +  + +++  T+  ++  Y Q+G+ +KA+ L   ML   V P+A+T  +IL ACS  G
Sbjct: 484 EQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
 Frame = +3

Query: 9   VTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVFMR 188
           VTL S+L A S +  +  A Q H F I+      + +  A++  YS+   +  +  VF +
Sbjct: 326 VTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDK 385

Query: 189 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS-----YTG 353
             E+++V++ T++ ++ Q+G  ++AL L   M +     D++T  A+LSA S     Y G
Sbjct: 386 MLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVG 445

Query: 354 ------LVDEGLQIFESMK 392
                 L+  G+Q FE M+
Sbjct: 446 KQTHAYLIRRGIQ-FEGME 463


>gb|AFN88216.1| pentatricopeptide repeat-containing protein [Phaseolus vulgaris]
          Length = 499

 Score =  255 bits (651), Expect = 3e-66
 Identities = 122/150 (81%), Positives = 136/150 (90%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           NAVTLASILP+CS+MGS   ARQLHGFSIR  L+ NVYVGTAL+D YSK GAISYAENVF
Sbjct: 198 NAVTLASILPSCSSMGSTAIARQLHGFSIRQLLDENVYVGTALVDAYSKLGAISYAENVF 257

Query: 183 MRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLVD 362
           +RT  KNSVTYTTM+MSYGQHGMGK+AL LYDSMLRSG+KPDA+TF+AILSACSY+GLV+
Sbjct: 258 IRTLAKNSVTYTTMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSACSYSGLVE 317

Query: 363 EGLQIFESMKKVHKIKPSIEHYCCVADILG 452
           EGL IFESM K+HKIKPS EHYCCVAD+LG
Sbjct: 318 EGLHIFESMDKIHKIKPSTEHYCCVADMLG 347



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           ++VT+ ++L A S M      RQ H + IRH ++    + + LID Y+KSG I+ +E +F
Sbjct: 96  DSVTVTALLSAASNMRDSYIGRQTHAYLIRHGIQFEG-MESYLIDMYAKSGLITTSELLF 154

Query: 183 MRT--PEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 353
            +    +++  ++  M+  Y Q+G+  KA+ +    L   V P+A+T  +IL +CS  G
Sbjct: 155 EQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREALVRKVTPNAVTLASILPSCSSMG 213


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  234 bits (597), Expect = 5e-60
 Identities = 110/150 (73%), Positives = 135/150 (90%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           NAVTLASILPAC+ MG++G  +Q+HGF+IR FL RNV+VGTAL+D YSKSGAI+YAENVF
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVF 583

Query: 183 MRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLVD 362
             T EKNSVTYTTM+ SYGQHGMG++AL+L+ +ML SG+KPD++TFVAILSACSY GLVD
Sbjct: 584 AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643

Query: 363 EGLQIFESMKKVHKIKPSIEHYCCVADILG 452
           EGL+IF+SM++ +KI+PS EHYCCVAD+LG
Sbjct: 644 EGLRIFQSMEREYKIQPSAEHYCCVADMLG 673



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           ++VTL ++L   S + S    +Q H + IRH ++    + + LID Y+KSG I+ A+ +F
Sbjct: 422 DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLF 480

Query: 183 MRTPE--KNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGL 356
            +  +  ++  T+  M+  Y Q+G+ ++   ++  M+   V+P+A+T  +IL AC+  G 
Sbjct: 481 EKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGT 540

Query: 357 VDEGLQI 377
           +  G QI
Sbjct: 541 IGLGKQI 547



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/112 (32%), Positives = 60/112 (53%)
 Frame = +3

Query: 9   VTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVFMR 188
           VT  S L A S +  +   RQLH + ++      V +  A+I  YS+ G+I  +  VF  
Sbjct: 323 VTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSN 382

Query: 189 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS 344
             E++ VT+ TM+ ++ Q+G+  + L L  +M + G   D++T  A+LS  S
Sbjct: 383 MLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLAS 434


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  233 bits (595), Expect = 9e-60
 Identities = 109/150 (72%), Positives = 136/150 (90%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           NAVTLASILPAC+ MG++G  +Q+HGF+IR FL +NV+VGTAL+D YSKSGAI+YAENVF
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVF 583

Query: 183 MRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLVD 362
             T EKNSVTYTTM++SYGQHGMG++AL+L+ +ML SG+KPD++TFVAILSACSY GLVD
Sbjct: 584 AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643

Query: 363 EGLQIFESMKKVHKIKPSIEHYCCVADILG 452
           EGL+IF+SM++ +KI+PS EHYCCVAD+LG
Sbjct: 644 EGLRIFQSMEREYKIQPSSEHYCCVADMLG 673



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           ++VTL ++L   S + S    +Q H + IRH ++     G  LID Y+KSG I+ A+ +F
Sbjct: 422 DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLF 480

Query: 183 MRTP--EKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGL 356
            +    +++  T+  M+  Y Q+G+ ++   ++  M+   V+P+A+T  +IL AC+  G 
Sbjct: 481 EKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGT 540

Query: 357 VDEGLQI 377
           +  G QI
Sbjct: 541 IGLGKQI 547



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/112 (32%), Positives = 59/112 (52%)
 Frame = +3

Query: 9   VTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVFMR 188
           VT  S L A S +  +   RQLH + ++      V +  A+I  YS+ G+I  +  VF  
Sbjct: 323 VTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSN 382

Query: 189 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS 344
             E++ VT+ TM+ ++ Q+G+  + L L   M + G   D++T  A+LS  S
Sbjct: 383 MLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLAS 434


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/150 (69%), Positives = 132/150 (88%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           NAVTLASILPACS++GS+   +QLHG SIR+ L++N++V TAL+D YSKSGAI+YAE+VF
Sbjct: 406 NAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVF 465

Query: 183 MRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLVD 362
            ++ E+NSVTYTTM++ YGQHGMG+ AL+L+ SM +SG++PDAITFVA+LSACSY GLVD
Sbjct: 466 TQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVD 525

Query: 363 EGLQIFESMKKVHKIKPSIEHYCCVADILG 452
           EGL+IFESMK+  KI+PS  HYCCVAD+LG
Sbjct: 526 EGLRIFESMKRDFKIQPSTAHYCCVADMLG 555



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   NAVTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVF 182
           ++VT+ S+L A S + +    +Q H + IRH ++ +  + + LID Y+KSG I  ++ VF
Sbjct: 304 DSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMYAKSGLIRISQRVF 362

Query: 183 MRTPEKN--SVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGL 356
                +N    T+  ++  Y Q+G+ ++A   +  ML   ++P+A+T  +IL ACS  G 
Sbjct: 363 ENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGS 422

Query: 357 VDEGLQI 377
           ++ G Q+
Sbjct: 423 INLGKQL 429



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/112 (31%), Positives = 65/112 (58%)
 Frame = +3

Query: 9   VTLASILPACSTMGSMGFARQLHGFSIRHFLERNVYVGTALIDTYSKSGAISYAENVFMR 188
           VT  S L A S +  +G  +Q+H F++++    +V V  A++  YS+  ++  +  VF +
Sbjct: 205 VTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEK 264

Query: 189 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS 344
            PEK+ V++ TM+  + Q+G+ ++ L L   M + G   D++T  ++LSA S
Sbjct: 265 MPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAAS 316