BLASTX nr result

ID: Glycyrrhiza23_contig00011700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011700
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU17684.1| unknown [Glycine max]                                  273   7e-71
ref|XP_003552083.1| PREDICTED: ethylene-responsive transcription...   257   5e-66
gb|AFO38387.1| putative ethylene-responsive transcription factor...   250   8e-64
ref|XP_002307098.1| AP2/ERF domain-containing transcription fact...   242   2e-61
ref|XP_002533146.1| DNA binding protein, putative [Ricinus commu...   240   7e-61

>gb|ACU17684.1| unknown [Glycine max]
          Length = 318

 Score =  273 bits (699), Expect = 7e-71
 Identities = 178/337 (52%), Positives = 203/337 (60%), Gaps = 26/337 (7%)
 Frame = +3

Query: 228  MAAAIDIYNNNCSDMKPDFVDPCSE-ELMKALEPFMKSDS--------TYYPLVSFPPSF 380
            M   +D+YN   S M PDF+D CS+ ELMKALEPFMKSDS        T YP  S   S 
Sbjct: 1    MTTFMDMYNTTSSIMTPDFLDQCSDQELMKALEPFMKSDSSSTTSSSITTYPSFSSFSSS 60

Query: 381  PNLLKPSTSTQI----FPQKGNQIMQFSSIRLNQLTPSXXXXXXXXXXXXXXXXXXXXHA 548
            PNL   + STQ     + QKG    Q SS +LNQLTPS                      
Sbjct: 61   PNLSSTTWSTQFCSSSYHQKGPTPTQASSFKLNQLTPSQIFQIQAQIQVPRA-------- 112

Query: 549  HSFLSPR----KHIPMKKASS--TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXX 710
              FLSP+    +H+    ++S  TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+T  
Sbjct: 113  -QFLSPKPITMEHVRASCSNSKATKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAE 171

Query: 711  XXXXXXXXXXFKLRGENARLNFPHLRHH------EFGDYKVLPPSVDAKLQAICQSLFNS 872
                      FKLRGENARLNFPHLRHH      EFG+YK LP +VDAKLQAICQSL   
Sbjct: 172  EAALAYDNAAFKLRGENARLNFPHLRHHGARVYGEFGNYKPLPSAVDAKLQAICQSL--- 228

Query: 873  QKQQGKTEMPCFEMDTKPKVHAAPDQKAKLEFEDYKEENLTSSTLS-SDESYAGSSSPQS 1049
                  T++   + D  P V A    K   EFED+K EN TSS+ + SDE  + SSSP+S
Sbjct: 229  -----GTKLQKLKTDQNPVVDA--KVKKTSEFEDFKIENQTSSSSALSDEYSSSSSSPES 281

Query: 1050 DVTFLDFFSGSDETDNNLGLELDLEKYPSVEIDWEAI 1160
            D+TFLD FS S ET  NLG  LDLEKYPSVEIDW A+
Sbjct: 282  DITFLD-FSDSCETTCNLG--LDLEKYPSVEIDWAAL 315


>ref|XP_003552083.1| PREDICTED: ethylene-responsive transcription factor ERF060-like
            [Glycine max]
          Length = 309

 Score =  257 bits (657), Expect = 5e-66
 Identities = 179/332 (53%), Positives = 207/332 (62%), Gaps = 21/332 (6%)
 Frame = +3

Query: 228  MAAAIDIYNNNCSDMKPDFVDPCSE-ELMKALEPFMKSDSTY--YPLVSFPPSFPNLLKP 398
            MA  +D+YN + S M PDF+D CS+ ELMKALEPFMKSDS+   YP  S   S PN    
Sbjct: 1    MATVMDMYNTS-SIMIPDFLDQCSDQELMKALEPFMKSDSSSITYPSFSSFSSSPNF--- 56

Query: 399  STSTQIFPQKGNQIMQF-SSIRLNQLTPSXXXXXXXXXXXXXXXXXXXXHAHSFLSPRKH 575
             +ST  + QK +      SSI+LNQLTPS                        FLSP K 
Sbjct: 57   -SSTTSYEQKVSITPNHASSIKLNQLTPSQMFQIQARIQVPRG---------QFLSP-KP 105

Query: 576  IPMK------KASSTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXX 737
            IPMK       +  TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT           
Sbjct: 106  IPMKHVRASPSSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNA 165

Query: 738  XFKLRGENARLNFPHLRHH------EFGDYKVLPPSVDAKLQAICQSLFNSQKQQGKTEM 899
             FKLRGENARLNFPHLRHH      EFG+YK LP +VDAKLQAICQSL  +  Q+ KT+ 
Sbjct: 166  AFKLRGENARLNFPHLRHHGARAYGEFGNYKPLPSAVDAKLQAICQSL-GTNSQKLKTQN 224

Query: 900  PCFEMDTKPKVHAAPDQKAKLEFEDY-KEEN--LTSSTLSSDE--SYAGSSSPQSDVTFL 1064
            P   +DT    H A  + +  EF+D+ K EN   +SS+  SDE  S + SSSP+SD+T L
Sbjct: 225  P-IVLDT----HKAETETS--EFQDFNKVENYQTSSSSAFSDEYSSSSSSSSPESDITLL 277

Query: 1065 DFFSGSDETDNNLGLELDLEKYPSVEIDWEAI 1160
            D FS S ET +NLG  LDLEKYPSVEIDW A+
Sbjct: 278  D-FSDSCETMDNLG--LDLEKYPSVEIDWAAL 306


>gb|AFO38387.1| putative ethylene-responsive transcription factor ERF060-like
            [Glycine max]
          Length = 290

 Score =  250 bits (638), Expect = 8e-64
 Identities = 165/309 (53%), Positives = 185/309 (59%), Gaps = 25/309 (8%)
 Frame = +3

Query: 309  MKALEPFMKSDS--------TYYPLVSFPPSFPNLLKPSTSTQI----FPQKGNQIMQFS 452
            MKALEPFMKSDS        T YP  S   S PNL   + STQ     + QKG    Q S
Sbjct: 1    MKALEPFMKSDSSSTTSSSITTYPSFSSFSSSPNLSSTTWSTQFCSSSYHQKGPTPTQAS 60

Query: 453  SIRLNQLTPSXXXXXXXXXXXXXXXXXXXXHAHSFLSPR----KHIPMKKASS--TKLYR 614
            S +LNQLTPS                        FLSP+    KH+    ++S  TKLYR
Sbjct: 61   SFKLNQLTPSQIFQIQAQIQVPRA---------QFLSPKPITMKHVRASCSNSKATKLYR 111

Query: 615  GVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXFKLRGENARLNFPHLRHH 794
            GVRQRHWGKWVAEIRLPKNRTRLWLGTF+T            FKLRGENARLNFPHLRHH
Sbjct: 112  GVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGENARLNFPHLRHH 171

Query: 795  ------EFGDYKVLPPSVDAKLQAICQSLFNSQKQQGKTEMPCFEMDTKPKVHAAPDQKA 956
                  EFG+YK LP +VDAKLQAICQSL         T++   + D  P V A    K 
Sbjct: 172  GARVYGEFGNYKPLPSAVDAKLQAICQSL--------GTKLQKLKTDQNPVVDA--KVKK 221

Query: 957  KLEFEDYKEENLTSSTLS-SDESYAGSSSPQSDVTFLDFFSGSDETDNNLGLELDLEKYP 1133
              EFED+K EN TSS+ + SDE  + SSSP+SD+TFLD FS S ET  NLG  LDLEKYP
Sbjct: 222  TSEFEDFKIENQTSSSSALSDEYSSSSSSPESDITFLD-FSDSCETTCNLG--LDLEKYP 278

Query: 1134 SVEIDWEAI 1160
            SVEIDW A+
Sbjct: 279  SVEIDWAAL 287


>ref|XP_002307098.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222856547|gb|EEE94094.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 372

 Score =  242 bits (618), Expect = 2e-61
 Identities = 183/387 (47%), Positives = 208/387 (53%), Gaps = 76/387 (19%)
 Frame = +3

Query: 228  MAAAIDIYNNNCSDMKPDFVDPCSEELMKALEPFMKS-----DSTYY---PLVSFPP--- 374
            MAAAIDIYN       P F DPC EELMKALEPFMKS      STY    P  S PP   
Sbjct: 1    MAAAIDIYNTTV----PVFSDPCREELMKALEPFMKSASPSPTSTYSSPSPSTSSPPFSS 56

Query: 375  -------------SFPNL---LKPSTSTQIFPQ---KGNQI--MQFSSIRLNQLTPSXXX 491
                         S+PNL       TSTQ+F       NQ+   Q   I LN LTPS   
Sbjct: 57   HPSCFYNNNSLISSYPNLDLSFCSPTSTQMFSNGFLDYNQMGFEQTGPIGLNHLTPSQIL 116

Query: 492  XXXXXXXXXXXXXXXXXH-------------AHSFLSPRKHIPMKKASS-----TKLYRG 617
                             +             A +FL+P K +PMK++++     TKLYRG
Sbjct: 117  QIQAKIHFQQQQQQKMENLATTTSQFVHNQRASNFLAP-KPVPMKQSAASPQKPTKLYRG 175

Query: 618  VRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXFKLRGENARLNFPHLRHH- 794
            VRQRHWGKWVAEIRLPKNRTRLWLGT+DT            +KLRGE ARLNFPHLRH  
Sbjct: 176  VRQRHWGKWVAEIRLPKNRTRLWLGTYDTAEEAALAYDNAAYKLRGEYARLNFPHLRHQG 235

Query: 795  -----EFGDYKVLPPSVDAKLQAICQSLFNSQKQQGKTEMPCFEMDTKPKVHAAPDQKAK 959
                 EFGDYK L  SVDAKLQAICQSL    ++QGKT  P    ++K K   AP Q AK
Sbjct: 236  AHVSGEFGDYKPLHSSVDAKLQAICQSL--GLQKQGKTREPSSVANSK-KTATAPLQ-AK 291

Query: 960  LE-----------------FEDYKEENLTSSTLSSDESYAGSSSPQSDVTFLDFFSGS-- 1082
            +E                  EDYK E  + S  SSDES AGSSSP+S+++FLD FSGS  
Sbjct: 292  IEDDCSLRGELKTEYENFGVEDYKVEIPSPSPASSDESLAGSSSPESEISFLD-FSGSLQ 350

Query: 1083 -DETDNNLGLELDLEKYPSVEIDWEAI 1160
             DE +N       LEKYPSVEIDW +I
Sbjct: 351  WDEFEN-----FGLEKYPSVEIDWSSI 372


>ref|XP_002533146.1| DNA binding protein, putative [Ricinus communis]
            gi|223527057|gb|EEF29242.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 374

 Score =  240 bits (613), Expect = 7e-61
 Identities = 170/379 (44%), Positives = 201/379 (53%), Gaps = 68/379 (17%)
 Frame = +3

Query: 228  MAAAIDIYNNNCSDMKPDFVDPCSEELMKALEPFMKSDST-------------------- 347
            MAAAID Y+++ +     F+DP  EEL+KALEPFMKS S+                    
Sbjct: 1    MAAAIDFYSSSTTPSVFSFIDPGREELLKALEPFMKSASSPTSTSYNSSSSSVSHSTSSD 60

Query: 348  -------YYPLV-----SFPPSFPNLLKPSTSTQIFPQ---KGNQI--MQFSSIRLNQLT 476
                   Y+P       S P  +P+   P  ST +F Q     NQ+   Q  SI LN LT
Sbjct: 61   SLSPSPFYFPSYPSYDSSIPTMYPDFCSP-LSTHLFSQGFSGYNQLGFEQTGSIGLNHLT 119

Query: 477  PSXXXXXXXXXXXXXXXXXXXXHAHS----------FLSPRKHIPMKKASS----TKLYR 614
            PS                      +S           L+P K +PMK+++S    TKLYR
Sbjct: 120  PSQILQIQAQIHLQQQQQIANLATNSNLIHNDKKLKHLAP-KPVPMKQSASPPKPTKLYR 178

Query: 615  GVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXFKLRGENARLNFPHLRHH 794
            GVRQRHWGKWVAEIRLPKNRTRLWLGTFDT            +KLRGE ARLNFPHLRH 
Sbjct: 179  GVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLRHQ 238

Query: 795  ------EFGDYKVLPPSVDAKLQAICQSLFNSQKQQGKTEMPCFEMDTKPKVHA------ 938
                  EFGDYK L  SVDAKLQAICQSL NSQK QGK+       D+K    A      
Sbjct: 239  GAHVSGEFGDYKPLHSSVDAKLQAICQSLANSQK-QGKSGESSSVADSKANTSAYLQAKK 297

Query: 939  APDQKAKLEFEDYKEENLTSST-----LSSDESYAGSSSPQSDVTFLDFFSGSDETDNNL 1103
              D   K E EDYK E + + +      SSDES AGSSSPQS+++FLDF   S + D + 
Sbjct: 298  EQDCSMKREIEDYKVEAIPTGSPVAPASSSDESSAGSSSPQSEISFLDFSDSSSQWDES- 356

Query: 1104 GLELDLEKYPSVEIDWEAI 1160
                 LEKYPSVEIDW ++
Sbjct: 357  -ENFCLEKYPSVEIDWASL 374


Top