BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011683
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   279   3e-73
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   247   8e-64
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...   242   3e-62
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   231   8e-59

>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  279 bits (713), Expect = 3e-73
 Identities = 141/192 (73%), Positives = 146/192 (76%), Gaps = 4/192 (2%)
 Frame = -3

Query: 566 YFFYGHRKPSQNRPTVRGGLFSNRQTLXXXXXXXXXT-QPFEIHKWDXXXXXXXXXXXXX 390
           YFFYGHRKPSQNRPTVRGGLFSNR+TL             F+I KWD             
Sbjct: 13  YFFYGHRKPSQNRPTVRGGLFSNRKTLTPPKPKSTKPTNSFQIQKWDPHFLSQPNSPSPS 72

Query: 389 XXXXXXXXXL---RLSPIARFIIDAFRRNGYKWGPPVVTELNKLRRVPPNLVAEVLKVQT 219
                        RLSPIARFI+DAFR+N   WGPPVVTELNKLRRV P LVAEVLKVQT
Sbjct: 73  PSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVTPTLVAEVLKVQT 132

Query: 218 NPTLAFKFFHWVEKQKGYHHNFASYNAFAYCLNRSNHFRAADQLPELMDAQGKPPSEKQF 39
           NPTLAFKFFHWVEKQKGYHHNFASYNAF YCLNR+NHFRAADQLPELMDAQGKPPSEKQF
Sbjct: 133 NPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDAQGKPPSEKQF 192

Query: 38  EILIRMHSDAGR 3
           EILIRMHSDAGR
Sbjct: 193 EILIRMHSDAGR 204


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  247 bits (631), Expect = 8e-64
 Identities = 128/189 (67%), Positives = 136/189 (71%), Gaps = 1/189 (0%)
 Frame = -3

Query: 566 YFFYGHRKPSQNRPTVRGGLFSNRQTLXXXXXXXXXT-QPFEIHKWDXXXXXXXXXXXXX 390
           YFFYGHR PSQNRPTVRGGLFSNRQTL         T +PF I  WD             
Sbjct: 28  YFFYGHRNPSQNRPTVRGGLFSNRQTLNPNPSQPKPTTKPFNIKNWDPHFLSNPNSNPSP 87

Query: 389 XXXXXXXXXLRLSPIARFIIDAFRRNGYKWGPPVVTELNKLRRVPPNLVAEVLKVQTNPT 210
                     RLSPIARFI+DAFRRN  KW P V  EL+KLRR+ PNLVAEVLKVQTN T
Sbjct: 88  STLSSASL--RLSPIARFIVDAFRRNDNKWCPNVAAELSKLRRITPNLVAEVLKVQTNHT 145

Query: 209 LAFKFFHWVEKQKGYHHNFASYNAFAYCLNRSNHFRAADQLPELMDAQGKPPSEKQFEIL 30
           LA KFFHW   Q+GYHHNFASYNA AYCLNR + FRAADQLPELM++QGKPPSEKQFEIL
Sbjct: 146 LASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEIL 205

Query: 29  IRMHSDAGR 3
           IRMHSDA R
Sbjct: 206 IRMHSDANR 214


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  244 bits (623), Expect = 7e-63
 Identities = 128/194 (65%), Positives = 141/194 (72%), Gaps = 6/194 (3%)
 Frame = -3

Query: 566 YFFYGHRKPSQNRPTVRGGLFSNRQTLXXXXXXXXXT--QPFEIHKWDXXXXXXXXXXXX 393
           YFFYGHRKPSQNRP VRGGLF+NRQT+         T  +PF++HKWD            
Sbjct: 17  YFFYGHRKPSQNRPVVRGGLFTNRQTVKPQPPKNPITPFKPFDLHKWDPQQNLPHQPQPS 76

Query: 392 XXXXXXXXXXL----RLSPIARFIIDAFRRNGYKWGPPVVTELNKLRRVPPNLVAEVLKV 225
                     L    RLSPIARFI+DAFR+N  +WGP VVTEL KLRRV P+LVAEVLKV
Sbjct: 77  KPQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVAEVLKV 136

Query: 224 QTNPTLAFKFFHWVEKQKGYHHNFASYNAFAYCLNRSNHFRAADQLPELMDAQGKPPSEK 45
           + NP LA KFFHW  KQKG+ H FASYNAFAY LNRSN FRAADQLPELM+AQGKPP+EK
Sbjct: 137 ENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEK 196

Query: 44  QFEILIRMHSDAGR 3
           QFEILIRMHSDA R
Sbjct: 197 QFEILIRMHSDANR 210


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score =  242 bits (617), Expect = 3e-62
 Identities = 122/190 (64%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
 Frame = -3

Query: 566  YFFYGHRKPSQNRPTVRGGLFSNRQTLXXXXXXXXXTQ-PFEIHKWDXXXXXXXXXXXXX 390
            YFFYGHRKPSQNRP VRGGLFSNRQ +            PF++  WD             
Sbjct: 455  YFFYGHRKPSQNRPVVRGGLFSNRQIIKPQNSIKPKNPVPFDLQNWDPQNPCPSSKSPPL 514

Query: 389  XXXXXXXXXL-RLSPIARFIIDAFRRNGYKWGPPVVTELNKLRRVPPNLVAEVLKVQTNP 213
                       RLSPI+RFI DAFR+N  KWGPPVV EL KLRRV P+LV+EVLKV+ +P
Sbjct: 515  SQNHSLSTLSQRLSPISRFIRDAFRKNSNKWGPPVVAELRKLRRVTPDLVSEVLKVENDP 574

Query: 212  TLAFKFFHWVEKQKGYHHNFASYNAFAYCLNRSNHFRAADQLPELMDAQGKPPSEKQFEI 33
             LA +FFHW  KQKGY HNFASYNA+AYCLNRS+ FRAADQLPELMD+QGKPP+EKQFEI
Sbjct: 575  HLASQFFHWAGKQKGYRHNFASYNAYAYCLNRSSFFRAADQLPELMDSQGKPPTEKQFEI 634

Query: 32   LIRMHSDAGR 3
            LIRMHSDA R
Sbjct: 635  LIRMHSDANR 644


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  231 bits (588), Expect = 8e-59
 Identities = 120/190 (63%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
 Frame = -3

Query: 566  YFFYGHRKPSQNRPTVRGGLFSNRQTLXXXXXXXXXTQP-FEIHKWDXXXXXXXXXXXXX 390
            YFFYGHRKPSQNRPTV GGLFSNR TL             F +  WD             
Sbjct: 553  YFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNWDPDSPKALAIPPSK 612

Query: 389  XXXXXXXXXLR-LSPIARFIIDAFRRNGYKWGPPVVTELNKLRRVPPNLVAEVLKVQTNP 213
                      + LSPIAR+I D+FR++   WGPPVV +LNKLRRV P LVAEVLKVQT+P
Sbjct: 613  TPCERFFDIAKNLSPIARYICDSFRKHR-NWGPPVVADLNKLRRVTPVLVAEVLKVQTDP 671

Query: 212  TLAFKFFHWVEKQKGYHHNFASYNAFAYCLNRSNHFRAADQLPELMDAQGKPPSEKQFEI 33
             +  KFFHW  KQKGY HNFASYNAFAYCLNRSN FRAADQ+PELM+ QGKPPSEKQFEI
Sbjct: 672  VICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEI 731

Query: 32   LIRMHSDAGR 3
            LIRMH DA R
Sbjct: 732  LIRMHIDANR 741