BLASTX nr result

ID: Glycyrrhiza23_contig00011603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011603
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556798.1| PREDICTED: F-box/kelch-repeat protein At5g26...   277   1e-72
emb|CBI24318.3| unnamed protein product [Vitis vinifera]              204   9e-51
ref|XP_002268943.1| PREDICTED: F-box/kelch-repeat protein At5g26...   204   9e-51
dbj|BAD43758.1| putative protein [Arabidopsis thaliana]               198   6e-49
gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis...   198   6e-49

>ref|XP_003556798.1| PREDICTED: F-box/kelch-repeat protein At5g26960-like [Glycine max]
          Length = 423

 Score =  277 bits (708), Expect = 1e-72
 Identities = 146/229 (63%), Positives = 167/229 (72%), Gaps = 12/229 (5%)
 Frame = -3

Query: 653 DIVLDFLSRVXXXXXXXXXLVCRRWSLLLHSPDFSDXXXXXXXXXXXXXXXXATDFGFSA 474
           DIVLD LSRV         LVCRRWS LL SPDFSD                 T+ G S+
Sbjct: 56  DIVLDCLSRVPTSSLPALSLVCRRWSRLLSSPDFSDLRRHRLLLRHTAVAIAGTNLGLSS 115

Query: 473 ATLIEGNWNPSLFLPCYDAVSLESFHSLLSHARVASIGPRIYVVGRNATVRYDTWTGTVT 294
           ATL++G W+PSLF+PCYDA SL++FHSLL+HAR  S+GPRIY+VGRN T+ YDTWT TV+
Sbjct: 116 ATLLDGAWHPSLFVPCYDAHSLDNFHSLLAHARACSVGPRIYLVGRNNTLLYDTWTATVS 175

Query: 293 PRSTMIFPRKKFALAAVAGKIYVAGGGSRTAAVEEYDPVIDTWSVVGHAPRRRYGCIGAS 114
            R++MIFPRKKFALAAV GKIYV+GG S T+AVEEYDP  DTWSVV +APR+RYGC+G S
Sbjct: 176 TRASMIFPRKKFALAAVGGKIYVSGGSSGTSAVEEYDPETDTWSVVCNAPRKRYGCLGTS 235

Query: 113 AVCVFYVIGGLRIGASEQN------------EAHAAAYASSMDLFDVEA 3
              VFYVIGGLRIGA+EQN            EAH AAYASSMDLFDVEA
Sbjct: 236 FQGVFYVIGGLRIGATEQNLPNLFPRASRGVEAH-AAYASSMDLFDVEA 283


>emb|CBI24318.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  204 bits (520), Expect = 9e-51
 Identities = 118/226 (52%), Positives = 140/226 (61%), Gaps = 9/226 (3%)
 Frame = -3

Query: 653 DIVLDFLSRVXXXXXXXXXLVCRRWSLLLHSPDFSDXXXXXXXXXXXXXXXXATDFGFSA 474
           D++L+ LSRV         LVCRRWS LL S    D                 TD G  A
Sbjct: 49  DLLLECLSRVSSSSLPSVSLVCRRWSRLLSSSALYDLRRRNASIYHTVFVFSVTDSGLFA 108

Query: 473 ATLIEGN---WNPSLFLPCYDAVSLESFHSLLSHARVASIGPRIYVVGRNATVRYDTWTG 303
           ATL  G+   W  S F+P  D    E F   LSH+R+++IG  IY++GR   VRYD WTG
Sbjct: 109 ATLRFGDAYSWRTS-FIPAGDGG--EGFRGPLSHSRISAIGRGIYIIGRREMVRYDAWTG 165

Query: 302 TVTPRSTMIFPRKKFALAAVAGKIYVAGGGSRTAAVEEYDPVIDTWSVVGHAPRRRYGCI 123
            +T ++ M+FPRKKFA A VAG+IYVAGG +RT+A+EEYDPV D WSVV  APRRRYGCI
Sbjct: 166 ALTAKAGMVFPRKKFAAAMVAGRIYVAGGAARTSALEEYDPVSDKWSVVAEAPRRRYGCI 225

Query: 122 GASAVCVFYVIGGLRIGASEQN------EAHAAAYASSMDLFDVEA 3
           GA+   V YVIGGL+IGASE         A A  YASSMDL+DVEA
Sbjct: 226 GAAVDGVVYVIGGLKIGASESEVVPLAAGAEAHVYASSMDLYDVEA 271


>ref|XP_002268943.1| PREDICTED: F-box/kelch-repeat protein At5g26960-like [Vitis
           vinifera]
          Length = 416

 Score =  204 bits (520), Expect = 9e-51
 Identities = 118/226 (52%), Positives = 140/226 (61%), Gaps = 9/226 (3%)
 Frame = -3

Query: 653 DIVLDFLSRVXXXXXXXXXLVCRRWSLLLHSPDFSDXXXXXXXXXXXXXXXXATDFGFSA 474
           D++L+ LSRV         LVCRRWS LL S    D                 TD G  A
Sbjct: 49  DLLLECLSRVSSSSLPSVSLVCRRWSRLLSSSALYDLRRRNASIYHTVFVFSVTDSGLFA 108

Query: 473 ATLIEGN---WNPSLFLPCYDAVSLESFHSLLSHARVASIGPRIYVVGRNATVRYDTWTG 303
           ATL  G+   W  S F+P  D    E F   LSH+R+++IG  IY++GR   VRYD WTG
Sbjct: 109 ATLRFGDAYSWRTS-FIPAGDGG--EGFRGPLSHSRISAIGRGIYIIGRREMVRYDAWTG 165

Query: 302 TVTPRSTMIFPRKKFALAAVAGKIYVAGGGSRTAAVEEYDPVIDTWSVVGHAPRRRYGCI 123
            +T ++ M+FPRKKFA A VAG+IYVAGG +RT+A+EEYDPV D WSVV  APRRRYGCI
Sbjct: 166 ALTAKAGMVFPRKKFAAAMVAGRIYVAGGAARTSALEEYDPVSDKWSVVAEAPRRRYGCI 225

Query: 122 GASAVCVFYVIGGLRIGASEQN------EAHAAAYASSMDLFDVEA 3
           GA+   V YVIGGL+IGASE         A A  YASSMDL+DVEA
Sbjct: 226 GAAVDGVVYVIGGLKIGASESEVVPLAAGAEAHVYASSMDLYDVEA 271


>dbj|BAD43758.1| putative protein [Arabidopsis thaliana]
          Length = 412

 Score =  198 bits (504), Expect = 6e-49
 Identities = 112/224 (50%), Positives = 138/224 (61%), Gaps = 7/224 (3%)
 Frame = -3

Query: 653 DIVLDFLSRVXXXXXXXXXLVCRRWSLLLHSPDFSDXXXXXXXXXXXXXXXXATDFGFSA 474
           D++L+ +SRV         +VCRRWS LLHSP F                    D G  A
Sbjct: 49  DLLLECISRVPSSSIPSLAVVCRRWSRLLHSPYFLHLRRRLGLLRHSLFAISTVDSGLFA 108

Query: 473 ATLIE----GNWNPSLFLPCYDAVSLESFHSLLSHARVASIGPRIYVVGRNATVRYDTWT 306
           A L       +W  SL +    +V ++  +  LSHAR A+IGPR+YVV RNA +RYD+W 
Sbjct: 109 ADLQFQSEIASWKVSLAVSSR-SVGVDGSYGSLSHARAAAIGPRVYVVSRNAVLRYDSWM 167

Query: 305 GTVTPRSTMIFPRKKFALAAVAGKIYVAGGGSRT---AAVEEYDPVIDTWSVVGHAPRRR 135
           GT+  RS MIFPRKKFA+A V+GKIYVAGGG  +   AAVEEYDP ++ W VV  + R+R
Sbjct: 168 GTLNLRSPMIFPRKKFAIAVVSGKIYVAGGGGGSEVAAAVEEYDPELNRWEVVTQSARKR 227

Query: 134 YGCIGASAVCVFYVIGGLRIGASEQNEAHAAAYASSMDLFDVEA 3
           YGCIGA+   VFYVIGGL+IG        A AYASSMDLFDVE+
Sbjct: 228 YGCIGAAVDGVFYVIGGLKIGNETSRAVAARAYASSMDLFDVES 271


>gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis thaliana]
          Length = 704

 Score =  198 bits (504), Expect = 6e-49
 Identities = 112/224 (50%), Positives = 138/224 (61%), Gaps = 7/224 (3%)
 Frame = -3

Query: 653 DIVLDFLSRVXXXXXXXXXLVCRRWSLLLHSPDFSDXXXXXXXXXXXXXXXXATDFGFSA 474
           D++L+ +SRV         +VCRRWS LLHSP F                    D G  A
Sbjct: 50  DLLLECISRVPSSSIPSLAVVCRRWSRLLHSPYFLHLRRRLGLLRHSLFAISTVDSGLFA 109

Query: 473 ATLIE----GNWNPSLFLPCYDAVSLESFHSLLSHARVASIGPRIYVVGRNATVRYDTWT 306
           A L       +W  SL +    +V ++  +  LSHAR A+IGPR+YVV RNA +RYD+W 
Sbjct: 110 ADLQFQSEIASWKVSLAVSSR-SVGVDGSYGSLSHARAAAIGPRVYVVSRNAVLRYDSWM 168

Query: 305 GTVTPRSTMIFPRKKFALAAVAGKIYVAGGGSRT---AAVEEYDPVIDTWSVVGHAPRRR 135
           GT+  RS MIFPRKKFA+A V+GKIYVAGGG  +   AAVEEYDP ++ W VV  + R+R
Sbjct: 169 GTLNLRSPMIFPRKKFAIAVVSGKIYVAGGGGGSEVAAAVEEYDPELNRWEVVTQSARKR 228

Query: 134 YGCIGASAVCVFYVIGGLRIGASEQNEAHAAAYASSMDLFDVEA 3
           YGCIGA+   VFYVIGGL+IG        A AYASSMDLFDVE+
Sbjct: 229 YGCIGAAVDGVFYVIGGLKIGNETSRAVAARAYASSMDLFDVES 272


Top