BLASTX nr result

ID: Glycyrrhiza23_contig00011599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011599
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...   159   2e-36
ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like...   156   1e-35
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...   155   3e-35
emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]   155   3e-35
ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein A...   153   1e-34

>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
            gi|223525847|gb|EEF28281.1| ring finger protein, putative
            [Ricinus communis]
          Length = 344

 Score =  159 bits (403), Expect = 2e-36
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = -3

Query: 1081 HPIWFIRTVGLQQSVIDSITVFKYRKNEGLIDGTECSVCLGEFQQEESLRLLPKCSHAFH 902
            HPIW+I TVGLQQSVIDSI VFKY+K+EGLI+GTECSVCL EFQ++ESLRLLPKCSHAFH
Sbjct: 56   HPIWYINTVGLQQSVIDSIAVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFH 115

Query: 901  IPCIDTWLRSHTNCPLCRAP 842
            IPCIDTWLRSH NCPLCRAP
Sbjct: 116  IPCIDTWLRSHKNCPLCRAP 135


>ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
            gi|449496527|ref|XP_004160157.1| PREDICTED: RING-H2
            finger protein ATL54-like [Cucumis sativus]
          Length = 397

 Score =  156 bits (395), Expect = 1e-35
 Identities = 80/155 (51%), Positives = 96/155 (61%)
 Frame = -3

Query: 1306 LLQIALIITACMVSMVMLLCTFSIILRSYYSXXXXXXXXXXXXXXXXNTPILFXXXXXXX 1127
            LL ++LI TA +V+ + LLC      R Y +                  P+LF       
Sbjct: 72   LLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRL------------PVLFDVQAENL 119

Query: 1126 XXXXXXXXXXXXXXDHPIWFIRTVGLQQSVIDSITVFKYRKNEGLIDGTECSVCLGEFQQ 947
                           H +W+I TVGLQQS IDSIT+FKYRK+E LIDG++CS+CLGEFQ 
Sbjct: 120  PDNDEEEPVID----HHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQD 175

Query: 946  EESLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAP 842
            +ESLRLLPKCSHAFH+PCIDTWLRSH NCPLCRAP
Sbjct: 176  DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAP 210


>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score =  155 bits (392), Expect = 3e-35
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = -3

Query: 1081 HPIWFIRTVGLQQSVIDSITVFKYRKNEGLIDGTECSVCLGEFQQEESLRLLPKCSHAFH 902
            HPIW I TVGLQQSVID ITV KY K EGLI+GTECSVCLGEF+++ESLRLLPKCSHAFH
Sbjct: 94   HPIWLINTVGLQQSVIDLITVIKYNKEEGLIEGTECSVCLGEFEEDESLRLLPKCSHAFH 153

Query: 901  IPCIDTWLRSHTNCPLCRAP 842
            +PCIDTWLRSH NCPLCRAP
Sbjct: 154  VPCIDTWLRSHKNCPLCRAP 173


>emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]
          Length = 371

 Score =  155 bits (392), Expect = 3e-35
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = -3

Query: 1081 HPIWFIRTVGLQQSVIDSITVFKYRKNEGLIDGTECSVCLGEFQQEESLRLLPKCSHAFH 902
            HPIW I TVGLQQSVID ITV KY K EGLI+GTECSVCLGEF+++ESLRLLPKCSHAFH
Sbjct: 93   HPIWLINTVGLQQSVIDLITVIKYNKEEGLIEGTECSVCLGEFEEDESLRLLPKCSHAFH 152

Query: 901  IPCIDTWLRSHTNCPLCRAP 842
            +PCIDTWLRSH NCPLCRAP
Sbjct: 153  VPCIDTWLRSHKNCPLCRAP 172


>ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein ATL53-like [Glycine max]
          Length = 352

 Score =  153 bits (387), Expect = 1e-34
 Identities = 65/80 (81%), Positives = 76/80 (95%)
 Frame = -3

Query: 1081 HPIWFIRTVGLQQSVIDSITVFKYRKNEGLIDGTECSVCLGEFQQEESLRLLPKCSHAFH 902
            HPIW+IRT GLQQ+VI +ITV KYRK+EGLI+GT+CSVCL EFQ++ESLRLLPKC+HAFH
Sbjct: 121  HPIWYIRTTGLQQAVITAITVCKYRKDEGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFH 180

Query: 901  IPCIDTWLRSHTNCPLCRAP 842
            +PCIDTWLRSHTNCP+CRAP
Sbjct: 181  LPCIDTWLRSHTNCPMCRAP 200


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