BLASTX nr result

ID: Glycyrrhiza23_contig00011554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011554
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517844.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...    74   2e-16
ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...    59   2e-14
ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-...    80   8e-13
ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-...    80   8e-13
ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-...    76   1e-11

>ref|XP_003517844.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           13-like [Glycine max]
          Length = 302

 Score = 74.3 bits (181), Expect(2) = 2e-16
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = -1

Query: 351 FYQMAKKNKKKYVLEMEAYK*KKDEETANLMKEEEEHMKLQKQEALQI 208
           + +MAKKNK++Y LEMEAYK KKDEE  + MKEEE+HMK+QKQEALQ+
Sbjct: 170 YEEMAKKNKEQYALEMEAYKQKKDEEAGHFMKEEEDHMKVQKQEALQL 217



 Score = 38.1 bits (87), Expect(2) = 2e-16
 Identities = 26/43 (60%), Positives = 29/43 (67%), Gaps = 7/43 (16%)
 Frame = -2

Query: 209 LQLLK--EKTGNMIK*----TNLNRQKKKQSKE-MNSDPNRPK 102
           LQLLK  EK  N+IK     T  N QKKKQ+K+  NSDPNRPK
Sbjct: 215 LQLLKKKEKIENIIKFFSSKTKXNLQKKKQNKDDKNSDPNRPK 257


>ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           6-like [Vitis vinifera]
          Length = 502

 Score = 58.9 bits (141), Expect(2) = 2e-14
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -1

Query: 351 FYQMAKKNKKKYVLEMEAYK*KKDEETANLMKEEEEHMKLQKQEALQI 208
           + ++AKKNK KY  EM+ YK +KDE   NL K +EEHMK+QK EALQ+
Sbjct: 395 YEEIAKKNKAKYQEEMKLYKQQKDEAAENLKKGKEEHMKIQKHEALQL 442



 Score = 46.6 bits (109), Expect(2) = 2e-14
 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
 Frame = -2

Query: 209 LQLLK--EKTGNMIK*TNLNRQKKKQSKE-MNSDPNRPKR 99
           LQLLK  EKT N+IK T  NRQKKK+ KE  NSDPN+PK+
Sbjct: 440 LQLLKNKEKTENIIKKTKENRQKKKKXKEKANSDPNKPKK 479


>ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
           max]
          Length = 467

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = -1

Query: 351 FYQMAKKNKKKYVLEMEAYK*KKDEETANLMKEEEEHMKLQKQEALQI--ATAEGENWKY 178
           + +MAKKNK++Y LEMEAYK KKDEE A+ MKEEEE MKLQKQEALQ+     + EN   
Sbjct: 314 YEEMAKKNKEQYALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKKKEKTENIIK 373

Query: 177 DQVNKSESPEEETKQGNEF--*SKQAQET 97
           ++ +K+  P    K  + F   SK+A++T
Sbjct: 374 NKDDKNSDPNRPKKPASSFILFSKEARKT 402


>ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
          Length = 473

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 12/97 (12%)
 Frame = -1

Query: 351 FYQMAKKNKKKYVLEMEAYK*KKDEETANLMKEEEEHMKLQKQEALQ----------IAT 202
           + +MAKKNK+KY LEME YK KKDEE A+ MKEEEEHMKLQKQEALQ          I  
Sbjct: 312 YEEMAKKNKEKYALEMEVYKQKKDEEAAHFMKEEEEHMKLQKQEALQLLKKKEKTENIIK 371

Query: 201 AEGENWKYDQVNKSESPEEETKQGNEF--*SKQAQET 97
              +  K ++ +K+  P    K  + F   SK+A++T
Sbjct: 372 KTKQKKKQNKDDKNSDPNRPKKPASSFILFSKEAKKT 408


>ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
           max]
          Length = 478

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 41/76 (53%), Positives = 53/76 (69%)
 Frame = -1

Query: 351 FYQMAKKNKKKYVLEMEAYK*KKDEETANLMKEEEEHMKLQKQEALQIATAEGENWKYDQ 172
           + +MAKKNK++Y LEMEAYK KKDEE A+ MKEEEE MKLQKQEALQ+   +        
Sbjct: 314 YEEMAKKNKEQYALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKKK-------- 365

Query: 171 VNKSESPEEETKQGNE 124
             K+E+  ++TKQ  +
Sbjct: 366 -EKTENIIKKTKQNRQ 380


Top