BLASTX nr result

ID: Glycyrrhiza23_contig00011523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011523
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   183   1e-44
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   182   3e-44
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   178   4e-43
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   172   3e-41
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   169   2e-40

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/138 (64%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   FMNSHALKSSSEIAIQVKASEYAWETS-QNNKKVTIQVSETLKINKGQKVAICGLVGSGK 185
           F+N H+ K S+ +AI++K  EY WET+ Q +K  TIQ++  L I KGQKVAICG VGSGK
Sbjct: 577 FINRHSSKISA-VAIEIKPGEYVWETNDQTHKNPTIQITGKLVIKKGQKVAICGSVGSGK 635

Query: 186 SSLLCCMLGELSRISGKGIKIKGSRSYVPQSPWIQSGTVRENILFGKDVNRDLYEKVLEG 365
           SSL+CC+LGE+  +SG   K+ G+RSYVPQSPWIQSGTVRENILFGK + +D YE VL+G
Sbjct: 636 SSLICCLLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMKKDFYEDVLDG 695

Query: 366 CALHQDMNMWVDGDLTLV 419
           CALHQD+NMW DGDL  V
Sbjct: 696 CALHQDINMWGDGDLNPV 713


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/128 (67%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
 Frame = +3

Query: 39  SEIAIQVKASEYAWETS-QNNKKVTIQVSETLKINKGQKVAICGLVGSGKSSLLCCMLGE 215
           SE+AI++K  EYAWET+ Q + K  IQ++  L I KGQKVA+CG VGSGKSSLLCC+LGE
Sbjct: 584 SEVAIEIKPGEYAWETNDQTHTKPAIQITGKLVIKKGQKVAVCGSVGSGKSSLLCCLLGE 643

Query: 216 LSRISGKGIKIKGSRSYVPQSPWIQSGTVRENILFGKDVNRDLYEKVLEGCALHQDMNMW 395
           +  +SG   K+ G+RSYVPQSPWIQSGTVRENILFGK + ++ YE VL+GCALHQD+NMW
Sbjct: 644 IPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMKKEFYEDVLDGCALHQDINMW 703

Query: 396 VDGDLTLV 419
            DGDL LV
Sbjct: 704 GDGDLNLV 711


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score =  178 bits (452), Expect = 4e-43
 Identities = 80/130 (61%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
 Frame = +3

Query: 36  SSEIAIQVKASEYAWET-SQNNKKVTIQVSETLKINKGQKVAICGLVGSGKSSLLCCMLG 212
           +S+I I++K  EYAWET  QN+ K TI++++ +KI KG KVA+CG VGSGKSSLLC +LG
Sbjct: 471 ASDITIEMKCGEYAWETIDQNSTKPTIKITKNMKIMKGYKVAVCGSVGSGKSSLLCSILG 530

Query: 213 ELSRISGKGIKIKGSRSYVPQSPWIQSGTVRENILFGKDVNRDLYEKVLEGCALHQDMNM 392
           E+  ISG G+K+ G+++YVPQS WIQ+GTVR+N+LFGKD+++++YE VLEGCAL+QD+ +
Sbjct: 531 EIPMISGAGVKVHGTKAYVPQSAWIQTGTVRDNVLFGKDMSKEIYEDVLEGCALNQDIEI 590

Query: 393 WVDGDLTLVG 422
           W DGDLT+VG
Sbjct: 591 WADGDLTVVG 600


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/130 (61%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
 Frame = +3

Query: 36  SSEIAIQVKASEYAWETS-QNNKKVTIQVSETLKINKGQKVAICGLVGSGKSSLLCCMLG 212
           +S+IAI++K+ EYAWET  Q + K TI++++ +KI K  KVA+CG VGSGKSSLLC ++G
Sbjct: 210 ASDIAIEMKSGEYAWETKDQISTKTTIKITKNMKIMKLYKVAVCGSVGSGKSSLLCSIIG 269

Query: 213 ELSRISGKGIKIKGSRSYVPQSPWIQSGTVRENILFGKDVNRDLYEKVLEGCALHQDMNM 392
           E+ RISG GIK+ G+++YVPQ  WIQ+ TVR+N+LFGKD+NRD YE VL+GCAL QD+  
Sbjct: 270 EIPRISGAGIKVHGTKAYVPQRAWIQTRTVRDNVLFGKDMNRDFYEDVLKGCALKQDIEQ 329

Query: 393 WVDGDLTLVG 422
           W DGDLT+VG
Sbjct: 330 WADGDLTVVG 339


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1444

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/129 (59%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
 Frame = +3

Query: 39  SEIAIQVKASEYAWETS-QNNKKVTIQVSETLKINKGQKVAICGLVGSGKSSLLCCMLGE 215
           S++AI+++  EY+WE S QN KK TI+V+E ++I KG KVA+CG VGSGKSSLLC +LGE
Sbjct: 562 SDVAIEMEVGEYSWEASDQNFKKPTIKVAEKMQIPKGYKVAVCGSVGSGKSSLLCSILGE 621

Query: 216 LSRISGKGIKIKGSRSYVPQSPWIQSGTVRENILFGKDVNRDLYEKVLEGCALHQDMNMW 395
           + ++SG  +K+ GS++YVPQS WIQSGTVREN+LFGK++++  YE VLE CAL+QD+ +W
Sbjct: 622 IPQVSGTQMKVHGSKAYVPQSAWIQSGTVRENVLFGKEIDKHFYEDVLEACALNQDIKLW 681

Query: 396 VDGDLTLVG 422
           +DGD +L+G
Sbjct: 682 LDGDCSLLG 690


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