BLASTX nr result

ID: Glycyrrhiza23_contig00011514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011514
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534406.1| PREDICTED: structural maintenance of chromos...   218   4e-59
ref|XP_003606501.1| Structural maintenance of chromosomes protei...   211   6e-56
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   189   4e-50
emb|CBI38567.3| unnamed protein product [Vitis vinifera]              189   4e-50
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-48

>ref|XP_003534406.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Glycine max]
          Length = 1057

 Score =  218 bits (554), Expect(2) = 4e-59
 Identities = 108/121 (89%), Positives = 114/121 (94%)
 Frame = +1

Query: 52  KKVFGRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 231
           +KV  RKADL EI+EHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND
Sbjct: 132 RKVVSRKADLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 191

Query: 232 LLESISNEITTAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIQVQELKKKLAWS 411
           LLESISNEIT+A  +VEELETAIRPIE ELNELQVKI+ MEHVEQISIQVQ+LKKKLAWS
Sbjct: 192 LLESISNEITSAQLVVEELETAIRPIENELNELQVKIRNMEHVEQISIQVQQLKKKLAWS 251

Query: 412 W 414
           W
Sbjct: 252 W 252



 Score = 35.4 bits (80), Expect(2) = 4e-59
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 3   RISESTSSTMLKDHQGKK 56
           RISESTSST LKDHQG+K
Sbjct: 116 RISESTSSTTLKDHQGRK 133


>ref|XP_003606501.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355507556|gb|AES88698.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 622

 Score =  211 bits (538), Expect(2) = 6e-56
 Identities = 104/121 (85%), Positives = 112/121 (92%)
 Frame = +1

Query: 52  KKVFGRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 231
           KKVF RKADLQEI+EHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVN+
Sbjct: 136 KKVFSRKADLQEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNE 195

Query: 232 LLESISNEITTAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIQVQELKKKLAWS 411
           LLESIS EIT A  IVE+LE AIRPIEKELNEL  KIK MEHVE+I+++VQ+LKKKLAWS
Sbjct: 196 LLESISAEITKARVIVEDLEAAIRPIEKELNELDAKIKMMEHVERIAVEVQQLKKKLAWS 255

Query: 412 W 414
           W
Sbjct: 256 W 256



 Score = 31.2 bits (69), Expect(2) = 6e-56
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 3   RISESTSSTMLKDHQGKKSF 62
           RISES+SS  LKD QGKK F
Sbjct: 120 RISESSSSITLKDQQGKKVF 139


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  189 bits (481), Expect(2) = 4e-50
 Identities = 92/121 (76%), Positives = 106/121 (87%)
 Frame = +1

Query: 52  KKVFGRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 231
           K+V  RK DL E++EHFNIDVENPCVIMSQDKSREFLHSGN+KDKFKFF+KATLLQQVND
Sbjct: 134 KRVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVND 193

Query: 232 LLESISNEITTAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIQVQELKKKLAWS 411
           LL +I   + +A+ +VEELE +I PI KELNELQVKI+ MEHVE+IS QVQ+LKKKLAWS
Sbjct: 194 LLVNIGTRLDSANTLVEELEKSIEPILKELNELQVKIRNMEHVEEISQQVQQLKKKLAWS 253

Query: 412 W 414
           W
Sbjct: 254 W 254



 Score = 33.5 bits (75), Expect(2) = 4e-50
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 3   RISESTSSTMLKDHQGKK 56
           RIS STSST+LKDHQGK+
Sbjct: 118 RISVSTSSTVLKDHQGKR 135


>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  189 bits (481), Expect(2) = 4e-50
 Identities = 92/121 (76%), Positives = 106/121 (87%)
 Frame = +1

Query: 52  KKVFGRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 231
           K+V  RK DL E++EHFNIDVENPCVIMSQDKSREFLHSGN+KDKFKFF+KATLLQQVND
Sbjct: 104 KRVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVND 163

Query: 232 LLESISNEITTAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIQVQELKKKLAWS 411
           LL +I   + +A+ +VEELE +I PI KELNELQVKI+ MEHVE+IS QVQ+LKKKLAWS
Sbjct: 164 LLVNIGTRLDSANTLVEELEKSIEPILKELNELQVKIRNMEHVEEISQQVQQLKKKLAWS 223

Query: 412 W 414
           W
Sbjct: 224 W 224



 Score = 33.5 bits (75), Expect(2) = 4e-50
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 3   RISESTSSTMLKDHQGKK 56
           RIS STSST+LKDHQGK+
Sbjct: 88  RISVSTSSTVLKDHQGKR 105


>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  187 bits (474), Expect(2) = 1e-48
 Identities = 89/121 (73%), Positives = 107/121 (88%)
 Frame = +1

Query: 52  KKVFGRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVND 231
           +KV  R+ DL+E+IEHFNIDVENPCVIMSQDKSREFLHSGN KDKFKFF+KATLLQQVND
Sbjct: 135 RKVASRREDLRELIEHFNIDVENPCVIMSQDKSREFLHSGNEKDKFKFFFKATLLQQVND 194

Query: 232 LLESISNEITTAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIQVQELKKKLAWS 411
           LL SI+ ++ +A+ +V+ELE +I+PIEKEL ELQ KIK MEH+E++S Q Q+LKKKLAWS
Sbjct: 195 LLLSINEQLKSANALVDELEASIKPIEKELTELQGKIKNMEHLEEMSQQAQQLKKKLAWS 254

Query: 412 W 414
           W
Sbjct: 255 W 255



 Score = 31.2 bits (69), Expect(2) = 1e-48
 Identities = 12/18 (66%), Positives = 18/18 (100%)
 Frame = +3

Query: 3   RISESTSSTMLKDHQGKK 56
           RI++S+S+T+LKDHQG+K
Sbjct: 119 RINQSSSTTVLKDHQGRK 136


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