BLASTX nr result

ID: Glycyrrhiza23_contig00011502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011502
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ...   373   e-101
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...   273   7e-71
gb|ACL53100.1| unknown [Zea mays]                                     181   4e-43
gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| T...   181   4e-43
ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea ma...   181   5e-43

>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498638|gb|AES79841.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  373 bits (957), Expect = e-101
 Identities = 198/280 (70%), Positives = 233/280 (83%)
 Frame = +2

Query: 2    GRVEEALEMLKGMKEEKNLIDLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPN 181
            GRV+EA+E+L  MK      ++G DVYSY+AVM+GLCKVGRSDEAMEL +EA+ +GL+P+
Sbjct: 230  GRVDEAVEILMDMKTG----NIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPD 285

Query: 182  VVTFNTLIQGYSREGRPMEGVSVLKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVY 361
            VVTFN LI+GYSREGR MEGV VLK+MK +HGCV D I+Y TVLHGLLKWNE +EA GVY
Sbjct: 286  VVTFNALIEGYSREGREMEGVGVLKMMK-EHGCVADLINYKTVLHGLLKWNETVEAFGVY 344

Query: 362  REMVRLGFEVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLEVM 541
            +EMVR+GFEVD RMMGTLVRRLCK SW+EKG LL+DA EVFE+MKERGLVV D+RT+EVM
Sbjct: 345  KEMVRIGFEVDSRMMGTLVRRLCKLSWREKG-LLEDACEVFEKMKERGLVV-DKRTVEVM 402

Query: 542  VQALCRGKKFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLLLH 721
            V+AL RG+KFDEAL NL+ MV  GYS  G    I F +VI+GLCG+GRV+EAVS LLLL 
Sbjct: 403  VEALFRGEKFDEALVNLNDMVRWGYSLEG----IAFEEVIEGLCGQGRVDEAVSTLLLLQ 458

Query: 722  ANRGIANRVSYRVLIRELNAQGRVFCASFLFGLALKQGVV 841
            AN G  +RVS+ VL+ ELNA GRVFCASFLFG+ALK GVV
Sbjct: 459  ANGGFLDRVSFGVLVNELNAHGRVFCASFLFGVALKHGVV 498


>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  273 bits (698), Expect = 7e-71
 Identities = 148/283 (52%), Positives = 198/283 (69%)
 Frame = +2

Query: 2    GRVEEALEMLKGMKEEKNLIDLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPN 181
            GR++EA E+++ +K+      + PD+Y+YTA+MDG CKVGRSDEAMELLNEA+EMGL PN
Sbjct: 260  GRIDEAFELMEDIKKTT----VEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPN 315

Query: 182  VVTFNTLIQGYSREGRPMEGVSVLKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVY 361
            VVTFNTL+ GY++EGRP++G  VLKLMK +  C+PD ISYST+LHGLL W + +  L ++
Sbjct: 316  VVTFNTLLDGYAKEGRPLKGFGVLKLMKQRK-CMPDYISYSTLLHGLLLWGKVLAGLRIF 374

Query: 362  REMVRLGFEVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLEVM 541
             EM   G E D R+M +LVR LC++S KE   L++ AYEVFE+MK+RG  VI+Q T  ++
Sbjct: 375  NEMEGSGLEADERLMNSLVRGLCRKSIKEND-LVEVAYEVFEKMKKRGF-VIEQSTYALV 432

Query: 542  VQALCRGKKFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLLLH 721
            +QAL   KK D+A  NL  MV LGY P      I    VIQ LC  G+V++A   L+L++
Sbjct: 433  IQALWVAKKVDDAFINLHQMVRLGYIP----RLITINNVIQALCVGGKVDKAFYVLVLMY 488

Query: 722  ANRGIANRVSYRVLIRELNAQGRVFCASFLFGLALKQGVVPQQ 850
             N  I +R+SY +LI ELN Q R   A  ++G AL +GVVP +
Sbjct: 489  ENSKIPSRMSYDLLIHELNRQERTLGACNVYGAALVRGVVPHK 531



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 55/247 (22%), Positives = 113/247 (45%)
 Frame = +2

Query: 74  DVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSVL 253
           ++  +  V+  L     SD  ++L +      L+PN  TF+ +++ + ++  P E   VL
Sbjct: 140 NISDFNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVL 199

Query: 254 KLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFEVDVRMMGTLVRRLCK 433
             M  K G  P+  + + +++   K  +      V+  M R+G + +++    L++ +C 
Sbjct: 200 DQMMQK-GFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCY 258

Query: 434 RSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLEVMVQALCRGKKFDEALANLSYMVELG 613
                    + +A+E+ E++K +  V  D  T   M+   C+  + DEA+  L+  +E+G
Sbjct: 259 VG------RIDEAFELMEDIK-KTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMG 311

Query: 614 YSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLLLHANRGIANRVSYRVLIRELNAQGRV 793
            +P    N + F  ++ G    GR  +    L L+   + + + +SY  L+  L   G+V
Sbjct: 312 LAP----NVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKV 367

Query: 794 FCASFLF 814
                +F
Sbjct: 368 LAGLRIF 374


>gb|ACL53100.1| unknown [Zea mays]
          Length = 437

 Score =  181 bits (459), Expect = 4e-43
 Identities = 112/283 (39%), Positives = 163/283 (57%), Gaps = 3/283 (1%)
 Frame = +2

Query: 2   GRVEEALEMLKGMKEEKNLIDLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPN 181
           GR+EEALE+LK +K+      L PD+Y++T V+DG CKVGR++EA  + ++AI MGL P 
Sbjct: 140 GRLEEALELLKKLKDSP----LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPT 195

Query: 182 VVTFNTLIQGYSREGRPMEGVSVLKLM--KNKHGCVPDCISYSTVLHGLLKWNEGMEALG 355
             T+N L+ G+ +EG P++  ++L  M   N   C+PD  S+  VL  LL+  E   A  
Sbjct: 196 TFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQ 255

Query: 356 VYREMVRLGFEVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLE 535
            Y+ M R GFEVD R + TL R LC+R   +    L DA EVF ++   G   +   T  
Sbjct: 256 TYKRMERAGFEVDGRALDTLARGLCRRCATD-ASALGDAEEVFAKVVASGHEPVSY-TYC 313

Query: 536 VMVQALCRGKKFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLL 715
           +M QAL RG + D A+A L  MV  GY    A+    +  V++ LC RGR  +A+  L+L
Sbjct: 314 LMAQALARGGEVDAAVALLEDMVRKGY----ALRKRAYTDVVRALCDRGRARDALQVLVL 369

Query: 716 LHANRG-IANRVSYRVLIRELNAQGRVFCASFLFGLALKQGVV 841
           +   R  +  R ++  L+ EL+ QGR   A  ++  A+K+GVV
Sbjct: 370 VMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYAAAVKRGVV 412


>gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| TPA: hypothetical
            protein ZEAMMB73_414823 [Zea mays]
          Length = 559

 Score =  181 bits (459), Expect = 4e-43
 Identities = 112/283 (39%), Positives = 163/283 (57%), Gaps = 3/283 (1%)
 Frame = +2

Query: 2    GRVEEALEMLKGMKEEKNLIDLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPN 181
            GR+EEALE+LK +K+      L PD+Y++T V+DG CKVGR++EA  + ++AI MGL P 
Sbjct: 262  GRLEEALELLKKLKDSP----LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPT 317

Query: 182  VVTFNTLIQGYSREGRPMEGVSVLKLM--KNKHGCVPDCISYSTVLHGLLKWNEGMEALG 355
              T+N L+ G+ +EG P++  ++L  M   N   C+PD  S+  VL  LL+  E   A  
Sbjct: 318  TFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQ 377

Query: 356  VYREMVRLGFEVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLE 535
             Y+ M R GFEVD R + TL R LC+R   +    L DA EVF ++   G   +   T  
Sbjct: 378  TYKRMERAGFEVDGRALDTLARGLCRRCATD-ASALGDAEEVFAKVVASGHEPVSY-TYC 435

Query: 536  VMVQALCRGKKFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLL 715
            +M QAL RG + D A+A L  MV  GY    A+    +  V++ LC RGR  +A+  L+L
Sbjct: 436  LMAQALARGGEVDAAVALLEDMVRKGY----ALRKRAYTDVVRALCDRGRARDALQVLVL 491

Query: 716  LHANRG-IANRVSYRVLIRELNAQGRVFCASFLFGLALKQGVV 841
            +   R  +  R ++  L+ EL+ QGR   A  ++  A+K+GVV
Sbjct: 492  VMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYAAAVKRGVV 534


>ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
            gi|194689480|gb|ACF78824.1| unknown [Zea mays]
          Length = 558

 Score =  181 bits (458), Expect = 5e-43
 Identities = 112/283 (39%), Positives = 163/283 (57%), Gaps = 3/283 (1%)
 Frame = +2

Query: 2    GRVEEALEMLKGMKEEKNLIDLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPN 181
            GR+EEALE+LK +K+      L PD+Y++T V+DG CKVGR++EA  + ++AI MGL P 
Sbjct: 261  GRLEEALELLKKLKDSP----LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPT 316

Query: 182  VVTFNTLIQGYSREGRPMEGVSVLKLM--KNKHGCVPDCISYSTVLHGLLKWNEGMEALG 355
              T+N L+ G+ +EG P++  ++L  M   N   C+PD  S+  VL  LL+  E   A  
Sbjct: 317  TFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQ 376

Query: 356  VYREMVRLGFEVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLE 535
             Y+ M R GFEVD R + TL R LC+R   +    L DA EVF ++   G   +   T  
Sbjct: 377  TYKRMERAGFEVDGRALDTLARGLCRRCATD-ASALGDAEEVFGKVVASGHEPVSY-TYC 434

Query: 536  VMVQALCRGKKFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEEAVSALLL 715
            +M QAL RG + D A+A L  MV  GY    A+    +  V++ LC RGR  +A+  L+L
Sbjct: 435  LMAQALARGGEVDAAVALLEDMVRKGY----ALRKRAYTDVVRALCDRGRARDALQVLVL 490

Query: 716  LHANRG-IANRVSYRVLIRELNAQGRVFCASFLFGLALKQGVV 841
            +   R  +  R ++  L+ EL+ QGR   A  ++  A+K+GVV
Sbjct: 491  VMIVRDFVPGRNAFEALLGELSRQGRWADAMTVYAAAVKRGVV 533


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