BLASTX nr result

ID: Glycyrrhiza23_contig00011495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011495
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   226   8e-57
ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi...   212   9e-53
ref|XP_003555262.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   194   3e-47
ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   160   3e-37
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   157   5e-36

>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  226 bits (575), Expect = 8e-57
 Identities = 114/168 (67%), Positives = 127/168 (75%), Gaps = 4/168 (2%)
 Frame = +1

Query: 94  MGLQNQLNDVSSGSIPLLVLAQIATCVNYXXXXXXXXXXXXXXXXXHTDQIVDDHFFAAV 273
           MGLQNQLNDVSSGSIPLLVLAQIATCVNY                 H+DQIVD+ F AAV
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHSDQIVDERFLAAV 60

Query: 274 GSGLAGLIMLSDQLTLNNQFFYTYXXXXXXXXXXXX---CVVCQSTFQGGDHLRMLPCRH 444
           GSGLAGLIMLSDQLTL++QFF+ +               CVVCQ+TF+ GD +RMLPCRH
Sbjct: 61  GSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPCRH 120

Query: 445 VFHRRCVDGWLHH-KFSCPLCRFPLFSDEHVALTERRVGRQLVSWFSL 585
           VFHRRC DGWLHH KF+CPLCR PLFSDE VALTERR+G+QL+SWFSL
Sbjct: 121 VFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSL 168


>ref|XP_003638419.1| RING finger protein [Medicago truncatula]
           gi|355504354|gb|AES85557.1| RING finger protein
           [Medicago truncatula] gi|388513305|gb|AFK44714.1|
           unknown [Medicago truncatula]
          Length = 164

 Score =  212 bits (540), Expect = 9e-53
 Identities = 108/166 (65%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = +1

Query: 94  MGLQNQLNDVSSGSIPLLVLAQIATCVNYXXXXXXXXXXXXXXXXXHTDQIVDDHFFAAV 273
           MGLQ+QLNDVSS SIPLLVL  IATCVNY                  TDQIVDDHF AAV
Sbjct: 1   MGLQSQLNDVSSDSIPLLVLMHIATCVNYIRSMLLNFLQSIGLSRLQTDQIVDDHFIAAV 60

Query: 274 GSGLAGLIMLSDQLTLNNQFFYTYXXXXXXXXXXXXCVVCQSTFQGGDHLRMLPCRHVFH 453
           GSGLAGLIMLSDQL+LNNQFFY Y            CV CQS F+ GDH+R LPCRHVFH
Sbjct: 61  GSGLAGLIMLSDQLSLNNQFFYKY--EDAASADNHRCVFCQSNFENGDHVRKLPCRHVFH 118

Query: 454 RRCVDGWLHH-KFSCPLCRFPLFSDEHVALTERRVGRQLVSWFSLR 588
           R C++GW H   F+CPLCR  L SDE VALTERRVG QL+SWF+LR
Sbjct: 119 RHCLNGWFHRFNFNCPLCRCSLHSDERVALTERRVGSQLISWFTLR 164


>ref|XP_003555262.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 153

 Score =  194 bits (493), Expect = 3e-47
 Identities = 102/165 (61%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
 Frame = +1

Query: 94  MGLQNQLNDVSSGSIPLLVLAQIATCVNYXXXXXXXXXXXXXXXXXHTDQIVDDHFFAAV 273
           MGLQNQLNDVSSGSIPLLVLAQIATCVNY                  +D           
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLSLTSASSPPSDP---------- 50

Query: 274 GSGLAGLIMLSDQLTLNNQFFYTYXXXXXXXXXXXXCVVCQSTFQGGDHLRMLPCRHVFH 453
             GLAGLIMLSDQLTL++QFF+ +            CVVCQ+TF+ GD +RMLPCRHVFH
Sbjct: 51  --GLAGLIMLSDQLTLSSQFFH-HHHAGAGGHDHHPCVVCQATFEDGDQVRMLPCRHVFH 107

Query: 454 RRCVDGWLHH-KFSCPLCRFPLFSDEHVALTERRVGRQLVSWFSL 585
           RRC DGWLHH KF+CPLCR PLFSDE VA+TERR+G+QL+SWFSL
Sbjct: 108 RRCFDGWLHHYKFNCPLCRSPLFSDERVAVTERRLGQQLISWFSL 152


>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  160 bits (406), Expect = 3e-37
 Identities = 88/166 (53%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = +1

Query: 94  MGLQNQLNDVSSGSIPLLVLAQIATCVNYXXXXXXXXXXXXXXXXXHTDQIVDDHFFAAV 273
           MGLQ+QLNDVSS SIPLL++A IA CV Y                   D+ V+D    AV
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRFDADE-VEDGLLGAV 59

Query: 274 GSGLAGLIMLSDQLTLNNQFFYTYXXXXXXXXXXXXCVVCQSTFQGGDHLRMLPCRHVFH 453
           GSGLA LI+L++QL LN  F Y Y            CVVC    + GD +R L CRHVFH
Sbjct: 60  GSGLASLIVLAEQLNLNRVFSYRYGEDGGAASD---CVVCLCRLRDGDQVRRLACRHVFH 116

Query: 454 RRCVDGWLHH-KFSCPLCRFPLFSDEHVALTERRVGRQLVSWFSLR 588
           + C DGWL H  F+CPLCR PL SDE VALT+RRVG  LV+WFSLR
Sbjct: 117 KECFDGWLDHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  157 bits (396), Expect = 5e-36
 Identities = 84/168 (50%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
 Frame = +1

Query: 94  MGLQNQLNDVSSGSIPLLVLAQIATCVNYXXXXXXXXXXXXXXXXXHTDQIVDDHFFAAV 273
           MGLQNQLNDVSS SIPLL++A IA CV                       ++DD    ++
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAHVMDDRLMGSM 60

Query: 274 GSGLAGLIMLSDQLTLNNQFFYTYXXXXXXXXXXXX--CVVCQSTFQGGDHLRMLPCRHV 447
           GSGLAGLI+L++Q  LN  F Y Y              CVVC  T + GD +R L CRHV
Sbjct: 61  GSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSDCVVCLCTLRDGDQVRKLDCRHV 120

Query: 448 FHRRCVDGWLHH-KFSCPLCRFPLFSDEHVALTERRVGRQLVSWFSLR 588
           FH+ C DGWL H  F+CPLCR+PL SDE V  T RRVG  LV WFSLR
Sbjct: 121 FHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168


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