BLASTX nr result
ID: Glycyrrhiza23_contig00011494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00011494
(1453 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin... 293 e-146
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 204 4e-98
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 204 2e-96
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 200 2e-91
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 200 2e-91
>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
Length = 393
Score = 293 bits (751), Expect(2) = e-146
Identities = 148/198 (74%), Positives = 164/198 (82%), Gaps = 6/198 (3%)
Frame = +2
Query: 674 EEEMYYWEDAVYRNGLFFAVSKEGVIAVCDVGGGS--PRVSIIQTTAPAGFSGDIHYAAF 847
EEEM WED V NGLFFAVSK G IAVCD G G PRVSIIQTT P GF+GDIHYA F
Sbjct: 198 EEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRVSIIQTTTPFGFAGDIHYAVF 257
Query: 848 SGEDLLLVTRVLEQEFSD----ESNLVYWTVGFEVFKMDWGVLAWQKVETLGDRVLFVGG 1015
S D+LL+ RVL+Q+FSD ES+LVY TVGFEVFKM+WG+L WQ+VETLG+RVLFVGG
Sbjct: 258 SAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGG 317
Query: 1016 NSSLSFSAADFEGCCADCIYFTDDYSESNHDDDAYGKHDLGIFRLWDQSIEPLPCFTRSS 1195
NSSLSF A+DF GC ADCIYFTDDYSESN DDDA GKHDLG+FRL D+SIEPLPCF ++S
Sbjct: 318 NSSLSFCASDFVGCSADCIYFTDDYSESN-DDDACGKHDLGVFRLRDKSIEPLPCFNQNS 376
Query: 1196 SYSRLGWPLPIWVTPNPC 1249
SRL WPLPIWV+PNPC
Sbjct: 377 C-SRLRWPLPIWVSPNPC 393
Score = 251 bits (642), Expect(2) = e-146
Identities = 126/207 (60%), Positives = 152/207 (73%)
Frame = +1
Query: 19 MGVDWGKLPPEIVETISRKLTLYGDYLRFRCVCRRWRSSVPETXXXXXXXXXXXXXXXXX 198
MGV+WG+LPPE++E+IS+ LT+Y DYLRFR VCR WRSSVP+
Sbjct: 1 MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSRRA 60
Query: 199 XXXXXFNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 378
F+LS NKTHLL N +RICGSSHGWLV LD++P +RLLNP+TRA+ PLPPL
Sbjct: 61 F----FDLSLNKTHLL-NPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPL 115
Query: 379 HTFPNVVDFDYSNIGREYLVRNPYXXXXXXFDAFSLRQMCNSFLRKVVLSSSPSRGDDFA 558
H FPNVV FD++N+GREYL++NPY AF+LRQMCNSFL KVVLS+SP+ DDFA
Sbjct: 116 HAFPNVVAFDHANVGREYLIQNPYGGLY----AFNLRQMCNSFLGKVVLSASPTLNDDFA 171
Query: 559 AFAVVGQHNLAFCRKGYDSWVFLIEEE 639
A A+VGQ+NLAFCR GYDSW+FL EE
Sbjct: 172 ALAIVGQNNLAFCRNGYDSWIFLNGEE 198
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 204 bits (519), Expect(2) = 4e-98
Identities = 98/197 (49%), Positives = 136/197 (69%), Gaps = 5/197 (2%)
Frame = +2
Query: 674 EEEMYYWEDAVYRNGLFFAVSKEGVIAVCDVGGGSPRVSIIQTTAPAGFSGDIHYAAFSG 853
E + ED ++ NG+F+AV+K G I +CD+ SPRVS ++T AG GD+ Y SG
Sbjct: 206 ENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAG--GDMQYLVNSG 263
Query: 854 EDLLLVTRVLEQEFSD-----ESNLVYWTVGFEVFKMDWGVLAWQKVETLGDRVLFVGGN 1018
++LLLVTR L+ E+ E +L+Y T+ FEVF++DW W ++ TLGD+ LF+G N
Sbjct: 264 DELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGEN 323
Query: 1019 SSLSFSAADFEGCCADCIYFTDDYSESNHDDDAYGKHDLGIFRLWDQSIEPLPCFTRSSS 1198
SSLS SA DF GC +CIY+TDDY ++N+D +G HDLGIF+L D++IEPLPC+ R+ +
Sbjct: 324 SSLSLSATDFSGCMGNCIYYTDDYLDANYDGH-FGDHDLGIFKLCDETIEPLPCYPRNFT 382
Query: 1199 YSRLGWPLPIWVTPNPC 1249
S L W P+WV+PNPC
Sbjct: 383 -SPLQWSPPLWVSPNPC 398
Score = 182 bits (461), Expect(2) = 4e-98
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 6/206 (2%)
Frame = +1
Query: 19 MGVDWGKLPPEIVETISRKLTLYGDYLRFRCVCRRWRSSVPETXXXXXXXXXXXXXXXXX 198
M +DW +LPPE++E IS+ LT+Y DYL R VC WR S+P+T
Sbjct: 1 MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQ 60
Query: 199 XXXXX-----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASL 363
F+LSTNK H L + + R CGSSHGWL+ LDD+P + L+NP+TRA L
Sbjct: 61 SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120
Query: 364 PLPPLHTFPNVVDFDYSNIGREYLVRNPYXXXXXXFDAFSLRQMCNSFLRKVVLSSSPSR 543
LPPL +FPNV+ F+YS+IGREY +RN SLRQM +SF+RKVVLSSSP +
Sbjct: 121 SLPPLSSFPNVISFNYSDIGREYALRNLLGERV----TVSLRQMRDSFIRKVVLSSSPLK 176
Query: 544 GDDFAAFAVVGQ-HNLAFCRKGYDSW 618
++F A++ Q +LA+CR G SW
Sbjct: 177 DNNFVVIAILNQTDDLAYCRNGDKSW 202
>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 204 bits (519), Expect(2) = 2e-96
Identities = 102/192 (53%), Positives = 132/192 (68%)
Frame = +2
Query: 674 EEEMYYWEDAVYRNGLFFAVSKEGVIAVCDVGGGSPRVSIIQTTAPAGFSGDIHYAAFSG 853
E + ED +Y NGLF+AV+K G I VCDV G SP+VS I+T P GD+ Y SG
Sbjct: 207 ENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIET--PRQIGGDMQYLVSSG 264
Query: 854 EDLLLVTRVLEQEFSDESNLVYWTVGFEVFKMDWGVLAWQKVETLGDRVLFVGGNSSLSF 1033
+ LLLVTR L+ + + +Y T FEVFK+D W++V +LGD +LF+G NSSL+
Sbjct: 265 DGLLLVTRYLDLDVEFDI-FIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLAL 323
Query: 1034 SAADFEGCCADCIYFTDDYSESNHDDDAYGKHDLGIFRLWDQSIEPLPCFTRSSSYSRLG 1213
SA+ GC DCIY+TDDYS +N+D G+HDLGIF+L D SIEPLPC+ R +SYSRL
Sbjct: 324 SASGLSGCMGDCIYYTDDYSANNYDGH-IGEHDLGIFKLSDGSIEPLPCYPR-NSYSRLQ 381
Query: 1214 WPLPIWVTPNPC 1249
WP P+W++PNPC
Sbjct: 382 WPPPLWISPNPC 393
Score = 176 bits (446), Expect(2) = 2e-96
Identities = 91/207 (43%), Positives = 125/207 (60%), Gaps = 7/207 (3%)
Frame = +1
Query: 19 MGVDWGKLPPEIVETISRKLTLYGDYLRFRCVCRRWRSSVPETXXXXXXXXXXXXXXXXX 198
M VDW +LPPE++E IS+K+T+Y DYL F+ VC W+SS+P+T
Sbjct: 1 MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60
Query: 199 XXXXX----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLP 366
FNLST K H L + CGSSHGWL+ LDDSP + ++NP+TR +
Sbjct: 61 SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIH 120
Query: 367 LPPLHTFPNVVDFDYSNIGREYLVRNPYXXXXXXFDAFSLRQMCNSFLRKVVLSSSP--S 540
LP + +FPNVV FDY+N+GREYL+ NP + SLRQM + F++KVV+SSSP
Sbjct: 121 LPAISSFPNVVSFDYANVGREYLLVNPQGER----NTASLRQMRDGFIKKVVMSSSPLEK 176
Query: 541 RGDDFAAFAVV-GQHNLAFCRKGYDSW 618
+GD F A A++ +LA+C+ G + W
Sbjct: 177 KGDFFVAMAILCSTGDLAYCKNGDECW 203
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 200 bits (509), Expect(2) = 2e-91
Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Frame = +2
Query: 674 EEEMYYWEDAVYRNGLFFAVSKEGVIAVCDVGGGSPRVSIIQTTAPAGFSGDIHYAAFSG 853
E+ Y ED ++ GLF+AV+K G IAVCDV G SPRVSII+ P F GD+ Y SG
Sbjct: 203 EDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM--PQQFGGDLQYLVESG 260
Query: 854 EDLLLVTRVLEQEFS---DESNLVYWTVGFEVFKMDWGVLAWQKVETLGDRVLFVGGNSS 1024
E+LLLVTR L+ + D+++L+Y T F+V ++D W+ V +LGDR LF+G N S
Sbjct: 261 EELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLS 320
Query: 1025 LSFSAADFEGCCADCIYFTDDYSESNHDDDAYGKHDLGIFRLWDQSIEPLPCFTRSSSYS 1204
LS S+ DF GC +CIY+TDDYSE N+D G+ DLGIF L D SIEPLPC S+
Sbjct: 321 LSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG-GEQDLGIFNLEDGSIEPLPC-----SHF 374
Query: 1205 RLGWPLPIWVTPNPC 1249
R+ WP P+WVTPNPC
Sbjct: 375 RIRWPPPLWVTPNPC 389
Score = 164 bits (414), Expect(2) = 2e-91
Identities = 87/204 (42%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Frame = +1
Query: 28 DWGKLPPEIVETISRKLTLYGDYLRFRCVCRRWRSSVPETXXXXXXXXXXXXXXXXXXXX 207
DW +L PE+++ I++K +Y DY+RFR VC WR+SVP+T
Sbjct: 3 DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHH 62
Query: 208 XX---FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 378
F+LS NK H L R GSSHGWL+ LD++P + LLNP+TR+ + LPPL
Sbjct: 63 THRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPL 122
Query: 379 HTFPNVVDFDYSNIGREYLVRNPYXXXXXXFDAFSLRQMCNSFLRKVVLSSSPSRGDDFA 558
TFPNVV F+++++GREY +R SL++M +SF++K +LSSSP+ G DF
Sbjct: 123 STFPNVVRFNFADVGREYALRTSSGDVYTR----SLKKMRDSFIKKTILSSSPANGSDFI 178
Query: 559 AFAVVGQ-HNLAFCRKGYDSWVFL 627
A ++ Q +LA CRK DSW FL
Sbjct: 179 AVVILNQTGDLALCRKSDDSWTFL 202
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 200 bits (508), Expect(2) = 2e-91
Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Frame = +2
Query: 674 EEEMYYWEDAVYRNGLFFAVSKEGVIAVCDVGGGSPRVSIIQTTAPAGFSGDIHYAAFSG 853
E+ Y ED ++ GLF+AV+K G IAVCDV G SPRVSII+ P F GD+ Y SG
Sbjct: 203 EDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM--PQQFGGDLQYLVESG 260
Query: 854 EDLLLVTRVLEQEFS---DESNLVYWTVGFEVFKMDWGVLAWQKVETLGDRVLFVGGNSS 1024
E+LLLVTR L+ + D+++L+Y T F+V ++D W+ V +LGDR LF+G N S
Sbjct: 261 EELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLS 320
Query: 1025 LSFSAADFEGCCADCIYFTDDYSESNHDDDAYGKHDLGIFRLWDQSIEPLPCFTRSSSYS 1204
LS S+ DF GC +CIY+TDDYSE N+D G+ DLGIF L D SIEPLPC S+
Sbjct: 321 LSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG-GEQDLGIFNLEDGSIEPLPC-----SHF 374
Query: 1205 RLGWPLPIWVTPNPC 1249
R+ WP P+WVTPNPC
Sbjct: 375 RIRWPPPLWVTPNPC 389
Score = 164 bits (414), Expect(2) = 2e-91
Identities = 87/204 (42%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Frame = +1
Query: 28 DWGKLPPEIVETISRKLTLYGDYLRFRCVCRRWRSSVPETXXXXXXXXXXXXXXXXXXXX 207
DW +L PE+++ I++K +Y DY+RFR VC WR+SVP+T
Sbjct: 3 DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHH 62
Query: 208 XX---FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 378
F+LS NK H L R GSSHGWL+ LD++P + LLNP+TR+ + LPPL
Sbjct: 63 THRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPL 122
Query: 379 HTFPNVVDFDYSNIGREYLVRNPYXXXXXXFDAFSLRQMCNSFLRKVVLSSSPSRGDDFA 558
TFPNVV F+++++GREY +R SL++M +SF++K +LSSSP+ G DF
Sbjct: 123 STFPNVVRFNFADVGREYALRTSSGDVYTR----SLKKMRDSFIKKTILSSSPANGSDFI 178
Query: 559 AFAVVGQ-HNLAFCRKGYDSWVFL 627
A ++ Q +LA CRK DSW FL
Sbjct: 179 AVVILNQTGDLALCRKSDDSWTFL 202