BLASTX nr result

ID: Glycyrrhiza23_contig00011484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011484
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   119   2e-25
gb|AFK47926.1| unknown [Medicago truncatula]                          116   2e-24
gb|ACJ84110.1| unknown [Medicago truncatula]                          116   2e-24
ref|NP_001235723.1| uncharacterized protein LOC100499766 [Glycin...   113   1e-23
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   113   1e-23

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  119 bits (299), Expect = 2e-25
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +2

Query: 47  PKQRAPRVTRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPQAPVEKPP 226
           PK R P+V RNP+L+RGIGKYSRSQMYHKRG+WAIKAKNGGVFP+HDPKPKP AP EKPP
Sbjct: 3   PKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEKPP 62

Query: 227 K 229
           K
Sbjct: 63  K 63


>gb|AFK47926.1| unknown [Medicago truncatula]
          Length = 234

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/60 (83%), Positives = 57/60 (95%)
 Frame = +2

Query: 50  KQRAPRVTRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPQAPVEKPPK 229
           K+RAPRV+RNP+LIRGIGK+S+SQMYHK+GIWAIKAKNGGVFPRHDPKPKP+   EKPPK
Sbjct: 5   KERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAEKPPK 64


>gb|ACJ84110.1| unknown [Medicago truncatula]
          Length = 234

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/60 (83%), Positives = 57/60 (95%)
 Frame = +2

Query: 50  KQRAPRVTRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPQAPVEKPPK 229
           K+RAPRV+RNP+LIRGIGK+S+SQMYHK+GIWAIKAKNGGVFPRHDPKPKP+   EKPPK
Sbjct: 5   KERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAEKPPK 64


>ref|NP_001235723.1| uncharacterized protein LOC100499766 [Glycine max]
           gi|255626411|gb|ACU13550.1| unknown [Glycine max]
          Length = 232

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +2

Query: 65  RVTRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPQAPVEKPPK 229
           +V+RNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGV PRHDPKPKP+AP EKPPK
Sbjct: 8   KVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPEAPAEKPPK 62


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  113 bits (283), Expect = 1e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +2

Query: 56  RAPRVTRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPQAPVEKPPK 229
           + PR++RNP L+RGIGKYSRSQMYHKRG+WAIKAKNGGVFP+HDPKPKP +P EKPPK
Sbjct: 4   KTPRISRNPNLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPASPAEKPPK 61


Top