BLASTX nr result

ID: Glycyrrhiza23_contig00011480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011480
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38352.1| unknown [Lotus japonicus]                               83   3e-14
ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro...    75   6e-12
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    75   7e-12
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    75   7e-12
ref|NP_001242193.1| uncharacterized protein LOC100805197 [Glycin...    72   5e-11

>gb|AFK38352.1| unknown [Lotus japonicus]
          Length = 121

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/43 (83%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   ARPRNKKKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 131
           ARP++KKKGRGPPRL+APP P+KKDKFEDNE+VKI+IDESLFS
Sbjct: 78  ARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVVKIDIDESLFS 120


>ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine
           max]
          Length = 121

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   ARPRNKKKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 131
           ARP++KKKGRGP R +APP PSKKD+ EDNE+VKIEIDESLFS
Sbjct: 78  ARPKDKKKGRGPLRPYAPPAPSKKDRLEDNEVVKIEIDESLFS 120


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   ARPRNKKKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 131
           ARPRNKKKGRGPPR   PP P KKD+FED+E+VKIEIDESLF+
Sbjct: 76  ARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 118


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   ARPRNKKKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 131
           ARPRNKKKGRGPPR   PP P KKD+FED+E+VKIEIDESLF+
Sbjct: 75  ARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 117


>ref|NP_001242193.1| uncharacterized protein LOC100805197 [Glycine max]
           gi|255640529|gb|ACU20550.1| unknown [Glycine max]
          Length = 158

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = -3

Query: 189 ISTTKS*KTQN*QCSTRIS*KRGIHQSQSSQSHYLRTCLSWKALVEQKALVVLYLSSCSL 10
           ISTTK  K    Q +T+I+ ++G  + QSS  HYLRTCLSWK  VE KALVVLY SSC L
Sbjct: 7   ISTTKPWKGSKLQFTTKINPRKGTRRFQSSPPHYLRTCLSWKVPVEHKALVVLYPSSCPL 66

Query: 9   ALH 1
           A H
Sbjct: 67  ASH 69


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