BLASTX nr result

ID: Glycyrrhiza23_contig00011469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011469
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43440.1| unknown [Medicago truncatula]                          180   9e-44
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   174   5e-42
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   174   5e-42
ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis p...   173   1e-41
ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   173   1e-41

>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/103 (85%), Positives = 92/103 (89%)
 Frame = -3

Query: 493 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 314
           GNFHLTVQ        AKHKVWLKPQSEMSFLYGNHVLKSALGRITEN+  GDGVVVFSM
Sbjct: 85  GNFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKSALGRITENIVSGDGVVVFSM 144

Query: 313 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLRIEDEL 185
           +DVPLGFG+AAKSTQDCRK+DPNGIVVLHQ DIGEYLRIEDEL
Sbjct: 145 SDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLRIEDEL 187


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = -3

Query: 493 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 314
           G+FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+ PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 313 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLRIEDEL 185
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQ+DIGEYLR+EDEL
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLRMEDEL 187


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = -3

Query: 493 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 314
           G+FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+ PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 313 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLRIEDEL 185
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQ+DIGEYLR+EDEL
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLRMEDEL 187


>ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Glycine max]
          Length = 187

 Score =  173 bits (439), Expect = 1e-41
 Identities = 83/103 (80%), Positives = 92/103 (89%)
 Frame = -3

Query: 493 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 314
           G+FHLTVQ        AKHKVWLKPQSEMSFLYGNHVLK ALG+++EN+A GDGVVVFSM
Sbjct: 85  GSFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKGALGKLSENIAAGDGVVVFSM 144

Query: 313 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLRIEDEL 185
           ADVPLGFG+AAKST DCRK+DPNGIVVLHQAD+GEYLR+EDEL
Sbjct: 145 ADVPLGFGVAAKSTLDCRKLDPNGIVVLHQADVGEYLRMEDEL 187


>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/103 (81%), Positives = 89/103 (86%)
 Frame = -3

Query: 493 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 314
           G FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+  GDG+VVFSM
Sbjct: 85  GKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVAGDGIVVFSM 144

Query: 313 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLRIEDEL 185
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQADIGEYLR+EDEL
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEYLRMEDEL 187


Top