BLASTX nr result

ID: Glycyrrhiza23_contig00011402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011402
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302393.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002320675.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_002510058.1| DNA binding protein, putative [Ricinus commu...   105   1e-20
ref|XP_004143031.1| PREDICTED: ocs element-binding factor 1-like...   102   6e-20
emb|CAN59722.1| hypothetical protein VITISV_032352 [Vitis vinifera]    99   9e-19

>ref|XP_002302393.1| predicted protein [Populus trichocarpa] gi|222844119|gb|EEE81666.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  118 bits (295), Expect = 1e-24
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
 Frame = -2

Query: 661 EAVRFSCPPVLE-FTQGEIEELFSLINQPLEPASPVSGSQGSNSNRPVYSTRERKLRRME 485
           EAV+F CP     FT  EI+EL SL+  P    SP   S  S SN+ +YS  ER+ RRM 
Sbjct: 6   EAVQFECPVQGPGFTDNEIQELLSLLRSP----SPGQNSGSSGSNQALYSLDERRRRRML 61

Query: 484 SNRESAKRSRWRKKRHLENVTHELNRLRIENRELKNRLGLTVHHHLLLSAENECLRTESM 305
           SNRESA+RSRWRKKRHLE++T +LNRL+I NRELKNRLG  ++   +L  EN+ L  ES+
Sbjct: 62  SNRESARRSRWRKKRHLEDLTQQLNRLKIVNRELKNRLGSILNQSHVLWRENDRLMLESI 121

Query: 304 A 302
           A
Sbjct: 122 A 122


>ref|XP_002320675.1| predicted protein [Populus trichocarpa] gi|222861448|gb|EEE98990.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  115 bits (288), Expect = 1e-23
 Identities = 70/127 (55%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
 Frame = -2

Query: 673 FNDDEAVRFSCPPVLE-FTQGEIEELFSLINQPLEPASP--VSGSQGSNSNRPVYSTRER 503
           F+  EAV+F  P     FT  EI+EL SL    L+P SP  +SGS+GSN  + VYS  ER
Sbjct: 2   FSAQEAVQFEHPVHGPGFTANEIQELLSL----LQPPSPTEISGSRGSN--QAVYSIDER 55

Query: 502 KLRRMESNRESAKRSRWRKKRHLENVTHELNRLRIENRELKNRLGLTVHHHLLLSAENEC 323
           K RRM SNRESA+RSRWRKK+HLE++T +LNRL+I+NREL+NRLG  ++   +L  EN  
Sbjct: 56  KRRRMVSNRESARRSRWRKKKHLEDLTQQLNRLKIQNRELQNRLGSIINQSHVLWRENGR 115

Query: 322 LRTESMA 302
           L +ES+A
Sbjct: 116 LMSESVA 122


>ref|XP_002510058.1| DNA binding protein, putative [Ricinus communis]
           gi|223550759|gb|EEF52245.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 161

 Score =  105 bits (262), Expect = 1e-20
 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
 Frame = -2

Query: 679 MFFNDDEAVRFSCPPVLE--FTQGEIEELFSLINQPL--EPASPVSGSQG-SNSNRPVYS 515
           MFF++ EAV+F   PV E   T  +I+++ S++  P    P+S +  S   SNSNR V+ 
Sbjct: 1   MFFSE-EAVQFE-KPVFEAGLTASDIQQILSVLESPTTDSPSSSLEESNSISNSNRVVHC 58

Query: 514 TRERKLRRMESNRESAKRSRWRKKRHLENVTHELNRLRIENRELKNRLGLTVHHHLLLSA 335
             ERK RRM SNRESA+RSRWRKKRHLE++T  LN+L  +NR+LK++LG  + H  +L  
Sbjct: 59  VDERKRRRMVSNRESARRSRWRKKRHLEDLTVRLNQLEFQNRDLKSQLGSVLEHCRVLWR 118

Query: 334 ENECLRTESMA 302
           EN+ L TE ++
Sbjct: 119 ENDRLTTEYLS 129


>ref|XP_004143031.1| PREDICTED: ocs element-binding factor 1-like [Cucumis sativus]
           gi|449519438|ref|XP_004166742.1| PREDICTED: ocs
           element-binding factor 1-like [Cucumis sativus]
          Length = 153

 Score =  102 bits (255), Expect = 6e-20
 Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
 Frame = -2

Query: 628 EFTQGEIEELFSLI----NQPLEPASPVSGSQGSNSNRPVYSTRERKLRRMESNRESAKR 461
           EFT  EIEEL SL     + P  P S   GS  ++      +  ERKLRRM SNRESA+R
Sbjct: 25  EFTASEIEELLSLFLANNDGPPSPGSDSQGSMRTSVTNCSTNDDERKLRRMISNRESARR 84

Query: 460 SRWRKKRHLENVTHELNRLRIENRELKNRLGLTVHHHLLLSAENECLRTESM 305
           SRWRKKRHLE++T E+NRL ++NRELK RLG  ++   ++  EN+ L  ESM
Sbjct: 85  SRWRKKRHLEDLTSEVNRLMMQNRELKERLGRVLNSRHMVMRENDWLWMESM 136


>emb|CAN59722.1| hypothetical protein VITISV_032352 [Vitis vinifera]
          Length = 131

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 59/112 (52%), Positives = 78/112 (69%)
 Frame = -2

Query: 637 PVLEFTQGEIEELFSLINQPLEPASPVSGSQGSNSNRPVYSTRERKLRRMESNRESAKRS 458
           PVL+ T  EI+EL SL     + AS  SGS+  ++N  V ST ERK +RM SNRESA+RS
Sbjct: 7   PVLDET--EIQELLSLFQTDHQVASQ-SGSE--DTNPAVCSTDERKRKRMISNRESARRS 61

Query: 457 RWRKKRHLENVTHELNRLRIENRELKNRLGLTVHHHLLLSAENECLRTESMA 302
           RWRKK+HLEN+++E+NRL ++NRE K+RLG   H   L+  +NE L  E +A
Sbjct: 62  RWRKKKHLENLSNEVNRLLVQNREYKHRLGSVTHQCHLVGRDNERLTYEYLA 113


Top