BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011373
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-a...   234   4e-59
ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-a...   233   1e-58
ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated p...   223   1e-55
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...   220   7e-55
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...   220   7e-55

>ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 282

 Score =  234 bits (597), Expect = 4e-59
 Identities = 125/163 (76%), Positives = 129/163 (79%), Gaps = 1/163 (0%)
 Frame = -2

Query: 1209 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 1030
            MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKP 
Sbjct: 1    MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPA 60

Query: 1029 D-ADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVNXXXXXXXXXXXXXXXXXXX 853
            + ADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAV                    
Sbjct: 61   EGADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPP 120

Query: 852  XPVIQAQPGLSXXXXXXXXXXXGMMQPQISRPPQLSAPPVSYP 724
             PV+QAQPGL+           GMMQPQISRPPQL+APPVSYP
Sbjct: 121  APVVQAQPGLAGPVRGVGGPAPGMMQPQISRPPQLNAPPVSYP 163


>ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 281

 Score =  233 bits (593), Expect = 1e-58
 Identities = 124/163 (76%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
 Frame = -2

Query: 1209 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 1030
            MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKP 
Sbjct: 1    MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPA 60

Query: 1029 D-ADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVNXXXXXXXXXXXXXXXXXXX 853
            +  DREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAV                    
Sbjct: 61   EGGDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPP 120

Query: 852  XPVIQAQPGLSXXXXXXXXXXXGMMQPQISRPPQLSAPPVSYP 724
             PV+QAQPGL+           GMMQPQISRPPQL+APPVSYP
Sbjct: 121  APVVQAQPGLAGPVRGMGGPAPGMMQPQISRPPQLNAPPVSYP 163


>ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
            truncatula] gi|355518812|gb|AET00436.1| Small nuclear
            ribonucleoprotein-associated protein B [Medicago
            truncatula]
          Length = 394

 Score =  223 bits (567), Expect = 1e-55
 Identities = 121/165 (73%), Positives = 123/165 (74%), Gaps = 2/165 (1%)
 Frame = -2

Query: 1209 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 1030
            MS+SKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK T
Sbjct: 1    MSLSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTT 60

Query: 1029 DADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVNXXXXXXXXXXXXXXXXXXXX 850
            D DREDRRTLGLVLLRGEEVISM VEGPPPPEESRSKAVN                    
Sbjct: 61   DGDREDRRTLGLVLLRGEEVISMAVEGPPPPEESRSKAVNAAAMAGPGIGRAAGRGIPPA 120

Query: 849  PVIQAQPGLSXXXXXXXXXXXGMMQPQISRPP--QLSAPPVSYPP 721
            PVIQAQPGL+           GMMQPQISRPP      PPV  PP
Sbjct: 121  PVIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVSYPGGPPVMRPP 165


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|30685110|ref|NP_849414.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
            protein [Arabidopsis thaliana] gi|7268840|emb|CAB79044.1|
            putative snRNP protein [Arabidopsis thaliana]
            gi|28393634|gb|AAO42236.1| putative snRNP protein
            [Arabidopsis thaliana] gi|28827492|gb|AAO50590.1|
            putative snRNP protein [Arabidopsis thaliana]
            gi|222423490|dbj|BAH19715.1| AT4G20440 [Arabidopsis
            thaliana] gi|332658930|gb|AEE84330.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658931|gb|AEE84331.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658932|gb|AEE84332.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658933|gb|AEE84333.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana]
          Length = 257

 Score =  220 bits (560), Expect = 7e-55
 Identities = 118/163 (72%), Positives = 126/163 (77%)
 Frame = -2

Query: 1209 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 1030
            MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK  
Sbjct: 1    MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-I 59

Query: 1029 DADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVNXXXXXXXXXXXXXXXXXXXX 850
            + +REDRRTLGLVLLRGEEVISMTVEGPPPPEESR+KA +                    
Sbjct: 60   NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTG 119

Query: 849  PVIQAQPGLSXXXXXXXXXXXGMMQPQISRPPQLSAPPVSYPP 721
            P++QAQPGLS           GMMQPQISRPPQLSAPP+  PP
Sbjct: 120  PLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
            lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
            ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  220 bits (560), Expect = 7e-55
 Identities = 118/163 (72%), Positives = 126/163 (77%)
 Frame = -2

Query: 1209 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 1030
            MSMSKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK  
Sbjct: 1    MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-I 59

Query: 1029 DADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVNXXXXXXXXXXXXXXXXXXXX 850
            + +REDRRTLGLVLLRGEEVISMTVEGPPPPEESR+KA +                    
Sbjct: 60   NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTG 119

Query: 849  PVIQAQPGLSXXXXXXXXXXXGMMQPQISRPPQLSAPPVSYPP 721
            P++QAQPGLS           GMMQPQISRPPQLSAPP+  PP
Sbjct: 120  PLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162