BLASTX nr result

ID: Glycyrrhiza23_contig00011370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011370
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homo...   475   e-131
ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homo...   473   e-131
gb|AFK42249.1| unknown [Medicago truncatula]                          446   e-123
gb|AFK42963.1| unknown [Medicago truncatula]                          444   e-122
ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   432   e-119

>ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  475 bits (1222), Expect = e-131
 Identities = 244/314 (77%), Positives = 259/314 (82%)
 Frame = -1

Query: 1207 MLEIKTAKTRKGKRELEKRAPKLVESGKKTLLLHGTKTSAVLNAVLAQIYHLKKESAVKY 1028
            MLEIKTAKTRKGKRELEKRAPKLVESGKKTL+LHGTKTS VLNAVLAQIYHLKK+SAVKY
Sbjct: 1    MLEIKTAKTRKGKRELEKRAPKLVESGKKTLILHGTKTSGVLNAVLAQIYHLKKDSAVKY 60

Query: 1027 SRKNENIKPFESGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRMYDHHIYDLVEVG 848
            SRKNEN+KPFE+GGETSLEFFSLKTDCS+FVYGSHSKKRPDNLVIGR YDHHI+DLVEVG
Sbjct: 61   SRKNENVKPFEAGGETSLEFFSLKTDCSVFVYGSHSKKRPDNLVIGRTYDHHIFDLVEVG 120

Query: 847  VENFKPMESFTYDKKLAPREGSKPFIVFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNL 668
            VENFKPMESF+Y+KKLAP+EGSKPFIVFIGEGF             LDL RGEVVENLNL
Sbjct: 121  VENFKPMESFSYNKKLAPKEGSKPFIVFIGEGFEAVEELKHLKEVLLDLLRGEVVENLNL 180

Query: 667  AGVDRAYVCTALSPNRVFFTHCALRLKKSGSVVPRMKLVEVGPSMDLVVRRHRPPNESLR 488
            AGVDRAYVC ALSPNRVFFTHCALRLKKSG+VVPRM+L EVGPSMD VVRRHRPPNESLR
Sbjct: 181  AGVDRAYVCAALSPNRVFFTHCALRLKKSGTVVPRMELEEVGPSMDFVVRRHRPPNESLR 240

Query: 487  KEAMXXXXXXXXXXXXXXXKDALQGKIGNIYIPDQKIGEMALPNXXXXXXXXXXXXXXKN 308
            KEAM               +D LQGKIG+IYIPDQK+GE  LP               KN
Sbjct: 241  KEAMKTSREKPKKKEKNVKRDELQGKIGSIYIPDQKVGETPLPYKAKGVKRERQEAKRKN 300

Query: 307  EGDEHASKKKKEDS 266
            E D  ASK+KKEDS
Sbjct: 301  ESDGSASKRKKEDS 314


>ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  473 bits (1218), Expect = e-131
 Identities = 244/314 (77%), Positives = 258/314 (82%)
 Frame = -1

Query: 1207 MLEIKTAKTRKGKRELEKRAPKLVESGKKTLLLHGTKTSAVLNAVLAQIYHLKKESAVKY 1028
            MLEIKTAKTRKGKRELEKRAPKLVESGKKTL+LHGTKTS VLNAVLAQIYHLKK+ AVKY
Sbjct: 1    MLEIKTAKTRKGKRELEKRAPKLVESGKKTLILHGTKTSGVLNAVLAQIYHLKKDCAVKY 60

Query: 1027 SRKNENIKPFESGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRMYDHHIYDLVEVG 848
            SR+NEN+KPFE+GGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGR YDHHIYDLVEVG
Sbjct: 61   SRRNENVKPFEAGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRTYDHHIYDLVEVG 120

Query: 847  VENFKPMESFTYDKKLAPREGSKPFIVFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNL 668
            VENFKPMESF+YDKKLAP+EGSKPFIVFIGEGF             LDL RGEVVENLNL
Sbjct: 121  VENFKPMESFSYDKKLAPKEGSKPFIVFIGEGFEAVEELKHLKEVLLDLLRGEVVENLNL 180

Query: 667  AGVDRAYVCTALSPNRVFFTHCALRLKKSGSVVPRMKLVEVGPSMDLVVRRHRPPNESLR 488
            AGVDRAYVC ALSPNRVFFTHCALRLKKSG+VVPRM+L EVGPSMD V+RRHRPPNESLR
Sbjct: 181  AGVDRAYVCAALSPNRVFFTHCALRLKKSGTVVPRMELEEVGPSMDFVLRRHRPPNESLR 240

Query: 487  KEAMXXXXXXXXXXXXXXXKDALQGKIGNIYIPDQKIGEMALPNXXXXXXXXXXXXXXKN 308
            KEA+               KD LQGKIG+IYIPDQK+GE  LP               KN
Sbjct: 241  KEALKTSREKPKKKEKNVKKDELQGKIGSIYIPDQKVGETPLPYKAKGVKRERRESKRKN 300

Query: 307  EGDEHASKKKKEDS 266
            E D  ASK+KKEDS
Sbjct: 301  ESDGSASKRKKEDS 314


>gb|AFK42249.1| unknown [Medicago truncatula]
          Length = 341

 Score =  446 bits (1146), Expect = e-123
 Identities = 223/313 (71%), Positives = 253/313 (80%), Gaps = 1/313 (0%)
 Frame = -1

Query: 1201 EIKTAKTRKGKRELEKRAPKLVESGKKTLLLHGTKTSAVLNAVLAQIYHLKKESAVKYSR 1022
            E +TA T KGK  L+KRAPK+VE+GKKTLLLHGTKTSAVLNAVL QIYHLKKESA+KYSR
Sbjct: 28   EFRTATTHKGKLALKKRAPKIVETGKKTLLLHGTKTSAVLNAVLTQIYHLKKESAIKYSR 87

Query: 1021 KNENIKPFESGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRMYDHHIYDLVEVGVE 842
            KN+NIKPFE+GGETSLEFF+ KTDCS+F+YGSHSKKRP+NLV+GRMYD H+YDL+EVG+E
Sbjct: 88   KNDNIKPFEAGGETSLEFFAQKTDCSLFLYGSHSKKRPNNLVLGRMYDFHVYDLIEVGIE 147

Query: 841  NFKPMESFTYDKKLAPREGSKPFIVFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAG 662
            NF+ MESF YDKK+AP+EGSKPF+ FIGEGF             LDLFRGEVVENLNLAG
Sbjct: 148  NFRGMESFDYDKKIAPKEGSKPFMAFIGEGFESVNELKQLKEVLLDLFRGEVVENLNLAG 207

Query: 661  VDRAYVCTALSPNRVFFTHCALRLKKSGSVVPRMKLVEVGPSMDLVVRRHRPPNESLRKE 482
            VDRAYVCTALSP +VFFTHCALRLKKSG+VVPRM+LVEVGPSMD+V+RRHRPPNES+ KE
Sbjct: 208  VDRAYVCTALSPTKVFFTHCALRLKKSGTVVPRMELVEVGPSMDMVIRRHRPPNESVMKE 267

Query: 481  AMXXXXXXXXXXXXXXXKDALQGKIGNIYIPDQKIGEMALPNXXXXXXXXXXXXXXKNEG 302
            AM               KD LQGKIGN+YIPDQKIGEM LPN              +  G
Sbjct: 268  AMKTSRDKPKKKEKNVKKDPLQGKIGNVYIPDQKIGEMVLPNKSKGVKRERREAKQQKHG 327

Query: 301  -DEHASKKKKEDS 266
             DEHASKK+K++S
Sbjct: 328  SDEHASKKQKDES 340


>gb|AFK42963.1| unknown [Medicago truncatula]
          Length = 341

 Score =  444 bits (1143), Expect = e-122
 Identities = 223/312 (71%), Positives = 252/312 (80%), Gaps = 1/312 (0%)
 Frame = -1

Query: 1201 EIKTAKTRKGKRELEKRAPKLVESGKKTLLLHGTKTSAVLNAVLAQIYHLKKESAVKYSR 1022
            E +TA T KGK  L+KRAPK+VE+GKKTLLLHGTKTSAVLNAVL QIYHLKKESA+KYSR
Sbjct: 28   EFRTATTHKGKLALKKRAPKIVETGKKTLLLHGTKTSAVLNAVLTQIYHLKKESAIKYSR 87

Query: 1021 KNENIKPFESGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRMYDHHIYDLVEVGVE 842
            KN+NIKPFE+GGETSLEFF+ KTDCS+F+YGSHSKKRP+NLV+GRMYD H+YDLVEVG+E
Sbjct: 88   KNDNIKPFEAGGETSLEFFAQKTDCSLFLYGSHSKKRPNNLVLGRMYDFHVYDLVEVGIE 147

Query: 841  NFKPMESFTYDKKLAPREGSKPFIVFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAG 662
            NF+ MESF YDKK+AP+EGSKPF+ FIGEGF             LDLFRGEVVENLNLAG
Sbjct: 148  NFRGMESFDYDKKIAPKEGSKPFMAFIGEGFESVNELKQLKEVLLDLFRGEVVENLNLAG 207

Query: 661  VDRAYVCTALSPNRVFFTHCALRLKKSGSVVPRMKLVEVGPSMDLVVRRHRPPNESLRKE 482
            VDRAYVCTALSP +VFFTHCALRLKKSG+VVPRM+LVEVGPSMD+V+RRHRPPNES+ KE
Sbjct: 208  VDRAYVCTALSPTKVFFTHCALRLKKSGTVVPRMELVEVGPSMDMVIRRHRPPNESVMKE 267

Query: 481  AMXXXXXXXXXXXXXXXKDALQGKIGNIYIPDQKIGEMALPNXXXXXXXXXXXXXXKNEG 302
            AM               KD LQGKIGN+YIPDQKIGEM LPN              +  G
Sbjct: 268  AMKTSRDKPKKKEKNVKKDPLQGKIGNVYIPDQKIGEMVLPNKSKGVKRERREAKQQKHG 327

Query: 301  -DEHASKKKKED 269
             DEHASKK+K++
Sbjct: 328  SDEHASKKQKDE 339


>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
            gi|297740066|emb|CBI30248.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  432 bits (1112), Expect = e-119
 Identities = 218/314 (69%), Positives = 251/314 (79%)
 Frame = -1

Query: 1207 MLEIKTAKTRKGKRELEKRAPKLVESGKKTLLLHGTKTSAVLNAVLAQIYHLKKESAVKY 1028
            ML+IKT K+ K KRE+EKRAPKLVESGKKTL+L GTKTS VLNAVL +IYHLKK+SAV+Y
Sbjct: 1    MLKIKTPKSGKAKREIEKRAPKLVESGKKTLILQGTKTSNVLNAVLTEIYHLKKDSAVRY 60

Query: 1027 SRKNENIKPFESGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRMYDHHIYDLVEVG 848
            +RKNENI+PFESGGETSLEFFSLKTDCSIFV+GSHSKKRPDNLVIGR YDHHIYDLVEVG
Sbjct: 61   TRKNENIRPFESGGETSLEFFSLKTDCSIFVFGSHSKKRPDNLVIGRTYDHHIYDLVEVG 120

Query: 847  VENFKPMESFTYDKKLAPREGSKPFIVFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNL 668
            VENFK MESFTYDKKL+P+ GSKPFI FIGEGF             LDL RGEVVENLNL
Sbjct: 121  VENFKSMESFTYDKKLSPKVGSKPFIAFIGEGFESVDELKHLKEVLLDLLRGEVVENLNL 180

Query: 667  AGVDRAYVCTALSPNRVFFTHCALRLKKSGSVVPRMKLVEVGPSMDLVVRRHRPPNESLR 488
            AG+D AY+CTA+S NRVFFTHCA+RLKKSG++VPRM+LVEVGPSMDLVVRRHR PN+S+R
Sbjct: 181  AGLDHAYICTAVSSNRVFFTHCAMRLKKSGTIVPRMELVEVGPSMDLVVRRHRLPNDSVR 240

Query: 487  KEAMXXXXXXXXXXXXXXXKDALQGKIGNIYIPDQKIGEMALPNXXXXXXXXXXXXXXKN 308
            KEAM               +D +QGK+G IY+PDQ++G +ALP               K+
Sbjct: 241  KEAMKTAKEQPKKKVKNVSQDVIQGKVGKIYVPDQQVGSVALPYKAKGLKRERREAKMKH 300

Query: 307  EGDEHASKKKKEDS 266
            E ++ A KK+KE+S
Sbjct: 301  ETNDRAPKKQKENS 314


Top