BLASTX nr result

ID: Glycyrrhiza23_contig00011359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011359
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601289.1| Polygalacturonase-1 non-catalytic subunit be...   427   e-117
ref|XP_003522375.1| PREDICTED: polygalacturonase-1 non-catalytic...   396   e-108
ref|XP_003528153.1| PREDICTED: polygalacturonase-1 non-catalytic...   392   e-107
ref|XP_004138283.1| PREDICTED: probable polygalacturonase non-ca...   305   1e-80
ref|XP_004166494.1| PREDICTED: probable polygalacturonase non-ca...   301   2e-79

>ref|XP_003601289.1| Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula] gi|355490337|gb|AES71540.1|
           Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula]
          Length = 628

 Score =  427 bits (1097), Expect = e-117
 Identities = 208/283 (73%), Positives = 239/283 (84%)
 Frame = +1

Query: 85  HSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHKP 264
           +SKQ  NPF+PKASLIR+WNT+ SNKLPIPN  LSKASPLTP  YA LIN      K KP
Sbjct: 30  YSKQKTNPFTPKASLIRHWNTKTSNKLPIPNFFLSKASPLTPQHYANLINLF----KQKP 85

Query: 265 FFSSQFHQSLCSTPNLFCTFDHPNTPHQQQQTAVTKNDVDSNFAVYSNKRFSNYGSSRLG 444
             SS  H +LCSTP LFC+FDHPNT +Q  +T    N  DSNFAVYSNK+FSNYGS+RLG
Sbjct: 86  S-SSNLHNTLCSTPYLFCSFDHPNTLYQSTKT----NKSDSNFAVYSNKKFSNYGSARLG 140

Query: 445 GVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSYGAGAASVSGE 624
           GVDSFKNYSN LNTN+DSFK+YS+ STR GG FN+YAENGNVANTNFT+YG+G++S +G 
Sbjct: 141 GVDSFKNYSNGLNTNSDSFKKYSSGSTRRGGEFNSYAENGNVANTNFTNYGSGSSSGTGN 200

Query: 625 FKNYDKLVNVPNLGFTTYDSAASNHKLSFTSYGNETNSGAQSFTSYGKRIRGGNSDFTNY 804
           FK+YDKLVNVPNLGFTTYDS A+NHKLSF+SYGN+TNSG+QSF SYGKR+R GNSDF NY
Sbjct: 201 FKSYDKLVNVPNLGFTTYDSGANNHKLSFSSYGNDTNSGSQSFNSYGKRVRSGNSDFINY 260

Query: 805 AVGSNIMQSAFTGYGELGTGAANDTFRSYSFNGNNPRNSFKNY 933
           AV SNI+QS FTGYGELGTG AND+F++YSFNGNNP++SFK Y
Sbjct: 261 AVSSNILQSTFTGYGELGTGGANDSFKAYSFNGNNPKSSFKAY 303


>ref|XP_003522375.1| PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like
           [Glycine max]
          Length = 664

 Score =  396 bits (1017), Expect = e-108
 Identities = 197/284 (69%), Positives = 227/284 (79%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q + ++INPFSPKASLIRYWNTR+SN LPIP+ LLSKAS LTPH YAIL   LN     K
Sbjct: 67  QTTLELINPFSPKASLIRYWNTRVSNNLPIPHLLLSKASTLTPHHYAILSKLLN----QK 122

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQQQTAVTKNDVDSNFAVYSNKRFSNYGSSRL 441
           P  +   H SLCS+PNL C+FD  +TP  Q      KND D NFAVYSNKRF+NYGSSR+
Sbjct: 123 PKPNENLHHSLCSSPNLLCSFD--DTPFAQTH----KND-DGNFAVYSNKRFANYGSSRV 175

Query: 442 GGVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSYGAGAASVSG 621
           GGVDSFKNYSN LN NND+F+RYSA STR G  F NYA+NGNVANTNF+SYG+ A   S 
Sbjct: 176 GGVDSFKNYSNGLNANNDAFRRYSAASTRRGEQFKNYADNGNVANTNFSSYGSTANQASA 235

Query: 622 EFKNYDKLVNVPNLGFTTYDSAASNHKLSFTSYGNETNSGAQSFTSYGKRIRGGNSDFTN 801
           EF NYDK VNVPNLGFTTYDS ASNHKLSF+SYGNETNSG+Q+FTSYGKR+RGG S+F N
Sbjct: 236 EFSNYDKTVNVPNLGFTTYDSGASNHKLSFSSYGNETNSGSQTFTSYGKRVRGGTSEFAN 295

Query: 802 YAVGSNIMQSAFTGYGELGTGAANDTFRSYSFNGNNPRNSFKNY 933
           YA  +NI+QS F+ YG+L TGA+ND+F+ YSFNGNNPR+ FK+Y
Sbjct: 296 YADDANILQSEFSSYGDLTTGASNDSFKFYSFNGNNPRHVFKSY 339



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
 Frame = +1

Query: 415 FSNYGSSRLGGVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSY 594
           F +YG     GVDSF +Y N  N  +DSF+ Y+  S      F NY  + NV N +FT Y
Sbjct: 336 FKSYGDGSAAGVDSFISYRNRANVGDDSFQSYAVRSKSGAATFANYGMSFNVGNDSFTEY 395

Query: 595 GAGA-ASVSGEFKNYD-----KLVNVPNLGFTTY 678
           G GA    S  FK+Y      K+ N     F+ Y
Sbjct: 396 GKGAMGKTSFGFKSYGLGRAFKVYNKDGASFSEY 429


>ref|XP_003528153.1| PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like
           [Glycine max]
          Length = 629

 Score =  392 bits (1008), Expect = e-107
 Identities = 194/284 (68%), Positives = 231/284 (81%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q + ++INPFSPKASLIRYWNTR+SN   IP+ LLSKASPLTP  YA+L N L  + K +
Sbjct: 31  QTTHELINPFSPKASLIRYWNTRVSNNNQIPHFLLSKASPLTPQNYAVL-NKLLTNQKPR 89

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQQQTAVTKNDVDSNFAVYSNKRFSNYGSSRL 441
           P  +   H SLCS+PNL C+FD  +TP+ Q +    KND D+NFA+Y+NKRF+NYGSSR+
Sbjct: 90  P--NENLHHSLCSSPNLLCSFD--DTPNAQTR----KND-DANFALYNNKRFANYGSSRV 140

Query: 442 GGVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSYGAGAASVSG 621
           GGVDSFKNYSN LN NND+F+RYSA STR G  FNNYA+NGNVANTNF+SYG+ A   SG
Sbjct: 141 GGVDSFKNYSNGLNANNDAFRRYSAASTRRGEQFNNYADNGNVANTNFSSYGSAANQTSG 200

Query: 622 EFKNYDKLVNVPNLGFTTYDSAASNHKLSFTSYGNETNSGAQSFTSYGKRIRGGNSDFTN 801
           EF NYDK VNVPNLGFTTYDS ASNHKLSF+SYGNETNSG+QSFTSYGKR+RGG S+F +
Sbjct: 201 EFSNYDKTVNVPNLGFTTYDSGASNHKLSFSSYGNETNSGSQSFTSYGKRVRGGTSEFAS 260

Query: 802 YAVGSNIMQSAFTGYGELGTGAANDTFRSYSFNGNNPRNSFKNY 933
           YA  +NI+QS F  YG+L TGA+ND+F+ YSFNGNNPR+ FK+Y
Sbjct: 261 YADDANILQSEFNSYGDLSTGASNDSFKFYSFNGNNPRHVFKSY 304



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 15/142 (10%)
 Frame = +1

Query: 403 SNKRFS--------------NYGSSRLGGVDSFKNYSNELNTNNDSFKRYSATSTRHGGN 540
           SN  F               +Y +    GVD+F +Y N  N  +DSF+ Y+A S      
Sbjct: 283 SNDSFKFYSFNGNNPRHVFKSYAAGSASGVDNFISYRNRANVGDDSFQSYAARSKSGAAT 342

Query: 541 FNNYAENGNVANTNFTSYGAGA-ASVSGEFKNYDKLVNVPNLGFTTYDSAASNHKLSFTS 717
           F NY  + NV N +FT YG GA    S  FK+Y         GF  Y+   +    SF+ 
Sbjct: 343 FANYGMSFNVGNDSFTEYGKGATGKTSFGFKSYGL-----GRGFKVYNKDGA----SFSE 393

Query: 718 YGNETNSGAQSFTSYGKRIRGG 783
           Y    N  A S     KR+  G
Sbjct: 394 Y---RNFSAASGKVVNKRVEPG 412


>ref|XP_004138283.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Cucumis sativus]
          Length = 645

 Score =  305 bits (780), Expect = 1e-80
 Identities = 160/284 (56%), Positives = 193/284 (67%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q S    NPF+PKASL+RYW T +S  LP P+  LSKASPL+    A L  H        
Sbjct: 49  QISSASSNPFTPKASLVRYWKTHVSTDLPTPDFFLSKASPLSAVDAAALATHAA-----G 103

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQQQTAVTKNDVDSNFAVYSNKRFSNYGSSRL 441
              SS+  +S C + NLFC+FD       Q +T+V ++  D++F +Y NK F NYG SRL
Sbjct: 104 ASLSSRL-ESFCFSANLFCSFD------SQSETSVPRSK-DADFKLYGNKNFVNYGGSRL 155

Query: 442 GGVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSYGAGAASVSG 621
           GG DSFKNYS+ LNT   SFKRY   S+ H   F +YAE+GNVAN+NF SYGAG+ S SG
Sbjct: 156 GGTDSFKNYSDGLNTAEHSFKRYGGNSSNHKEGFTSYAEDGNVANSNFVSYGAGSKSGSG 215

Query: 622 EFKNYDKLVNVPNLGFTTYDSAASNHKLSFTSYGNETNSGAQSFTSYGKRIRGGNSDFTN 801
           EF NYDKLVNVPNL FT YD  + +HKLSFTSYGNETNSG+QSFTSYGK   G   DF++
Sbjct: 216 EFTNYDKLVNVPNLRFTAYDLNSRSHKLSFTSYGNETNSGSQSFTSYGKNGNGVPQDFSS 275

Query: 802 YAVGSNIMQSAFTGYGELGTGAANDTFRSYSFNGNNPRNSFKNY 933
           Y+ GSNI+ S FTGYGE G   AND+F+ Y  +GNNP  +FKNY
Sbjct: 276 YSDGSNILTSTFTGYGESGK-TANDSFKEYGISGNNPHTNFKNY 318


>ref|XP_004166494.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Cucumis sativus]
          Length = 688

 Score =  301 bits (770), Expect = 2e-79
 Identities = 158/284 (55%), Positives = 192/284 (67%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q S    NPF+PKASL+RYW T +S  LP P+  LSKASPL+    A L  H        
Sbjct: 92  QISSASSNPFTPKASLVRYWKTHVSTDLPTPDFFLSKASPLSAVDAAALATHAA-----G 146

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQQQTAVTKNDVDSNFAVYSNKRFSNYGSSRL 441
              SS+  +S C + NLFC+FD       Q +T+V ++  D++F +Y NK F NYG +RL
Sbjct: 147 ASLSSRL-ESFCYSANLFCSFD------SQSETSVPRSK-DADFKLYGNKNFVNYGGNRL 198

Query: 442 GGVDSFKNYSNELNTNNDSFKRYSATSTRHGGNFNNYAENGNVANTNFTSYGAGAASVSG 621
           GG DSFKNYS+ LNT   SFKRY   S+ H   F +YAE+GNVAN+NF SYGAG+ S SG
Sbjct: 199 GGTDSFKNYSDGLNTAEHSFKRYGGNSSNHKEGFTSYAEDGNVANSNFVSYGAGSKSGSG 258

Query: 622 EFKNYDKLVNVPNLGFTTYDSAASNHKLSFTSYGNETNSGAQSFTSYGKRIRGGNSDFTN 801
           EF NY KLVNVPNL FT YD  + +HKLSFTSYGNETNSG+QSFTSYGK   G   DF++
Sbjct: 259 EFTNYGKLVNVPNLRFTAYDLNSRSHKLSFTSYGNETNSGSQSFTSYGKNGNGVPQDFSS 318

Query: 802 YAVGSNIMQSAFTGYGELGTGAANDTFRSYSFNGNNPRNSFKNY 933
           Y+ GSNI+ S FTGYGE G   AND+F+ Y  +GNNP  +FKNY
Sbjct: 319 YSDGSNILTSTFTGYGESGK-TANDSFKEYGISGNNPHTNFKNY 361


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