BLASTX nr result
ID: Glycyrrhiza23_contig00011311
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00011311 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003606359.1| Chromatin remodeling complex subunit [Medica... 62 6e-08 ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813... 60 1e-07 ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792... 59 3e-07 >ref|XP_003606359.1| Chromatin remodeling complex subunit [Medicago truncatula] gi|355507414|gb|AES88556.1| Chromatin remodeling complex subunit [Medicago truncatula] Length = 1283 Score = 61.6 bits (148), Expect = 6e-08 Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 22/106 (20%) Frame = +2 Query: 20 LERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPC------ 181 L R V P TV +T+ +NA PLN SS DQIS LD V+SS PC Sbjct: 479 LIRDAAVGFPSTVRTTDYPENAAPLNS-SSTDQISDGG------LDGVVSSSPCIFSSPG 531 Query: 182 -------SPLNPPL-QQQIPD--------GDIPVTVPENSHAVADC 271 S LNPP +QQ+PD G IPVT+PENSH A+C Sbjct: 532 DGRPATSSLLNPPSSKQQVPDSVVPAITDGQIPVTMPENSHEEAEC 577 >ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813071 [Glycine max] Length = 2002 Score = 60.5 bits (145), Expect = 1e-07 Identities = 40/86 (46%), Positives = 50/86 (58%) Frame = +2 Query: 14 SVLERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPCSPLN 193 +VL+ + V P TVN T+ +N PLN SS+DQIS P+LD LSS PC+ + Sbjct: 1248 NVLDGEEAVGRPATVNCTDYPENIIPLNS-SSMDQISNGG----PLLDGDLSSGPCAT-S 1301 Query: 194 PPLQQQIPDGDIPVTVPENSHAVADC 271 P +PD IPV VPENS VA C Sbjct: 1302 PGNGLTLPDEQIPVLVPENSDKVARC 1327 >ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792516 [Glycine max] Length = 2010 Score = 59.3 bits (142), Expect = 3e-07 Identities = 41/102 (40%), Positives = 59/102 (57%) Frame = +2 Query: 14 SVLERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPCSPLN 193 +VL+ + V P TVN T+ +N LN SS+DQIS P+LD LS PC+ + Sbjct: 1253 NVLDGEEAVGRPATVNCTDYPENVIALNS-SSMDQISNGG----PLLDGDLSPGPCTS-S 1306 Query: 194 PPLQQQIPDGDIPVTVPENSHAVADCHKDTEPSTNAVLVDKS 319 P + +PD IPV PENS+ VA+C T++V+V+K+ Sbjct: 1307 PSNGRTLPDEQIPVLEPENSNKVAECQ-----LTDSVVVNKN 1343