BLASTX nr result

ID: Glycyrrhiza23_contig00011311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011311
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606359.1| Chromatin remodeling complex subunit [Medica...    62   6e-08
ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813...    60   1e-07
ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792...    59   3e-07

>ref|XP_003606359.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355507414|gb|AES88556.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1283

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 22/106 (20%)
 Frame = +2

Query: 20  LERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPC------ 181
           L R   V  P TV +T+  +NA PLN  SS DQIS         LD V+SS PC      
Sbjct: 479 LIRDAAVGFPSTVRTTDYPENAAPLNS-SSTDQISDGG------LDGVVSSSPCIFSSPG 531

Query: 182 -------SPLNPPL-QQQIPD--------GDIPVTVPENSHAVADC 271
                  S LNPP  +QQ+PD        G IPVT+PENSH  A+C
Sbjct: 532 DGRPATSSLLNPPSSKQQVPDSVVPAITDGQIPVTMPENSHEEAEC 577


>ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813071 [Glycine max]
          Length = 2002

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 50/86 (58%)
 Frame = +2

Query: 14   SVLERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPCSPLN 193
            +VL+ +  V  P TVN T+  +N  PLN  SS+DQIS       P+LD  LSS PC+  +
Sbjct: 1248 NVLDGEEAVGRPATVNCTDYPENIIPLNS-SSMDQISNGG----PLLDGDLSSGPCAT-S 1301

Query: 194  PPLQQQIPDGDIPVTVPENSHAVADC 271
            P     +PD  IPV VPENS  VA C
Sbjct: 1302 PGNGLTLPDEQIPVLVPENSDKVARC 1327


>ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792516 [Glycine max]
          Length = 2010

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/102 (40%), Positives = 59/102 (57%)
 Frame = +2

Query: 14   SVLERQVPVQMPVTVNSTNCLQNATPLNPPSSVDQISGRSSLDIPVLDSVLSSRPCSPLN 193
            +VL+ +  V  P TVN T+  +N   LN  SS+DQIS       P+LD  LS  PC+  +
Sbjct: 1253 NVLDGEEAVGRPATVNCTDYPENVIALNS-SSMDQISNGG----PLLDGDLSPGPCTS-S 1306

Query: 194  PPLQQQIPDGDIPVTVPENSHAVADCHKDTEPSTNAVLVDKS 319
            P   + +PD  IPV  PENS+ VA+C       T++V+V+K+
Sbjct: 1307 PSNGRTLPDEQIPVLEPENSNKVAECQ-----LTDSVVVNKN 1343


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