BLASTX nr result

ID: Glycyrrhiza23_contig00011302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011302
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [G...   241   9e-62
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   170   2e-40
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   170   2e-40
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   162   4e-38
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   157   2e-36

>ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [Glycine max]
          Length = 276

 Score =  241 bits (614), Expect = 9e-62
 Identities = 120/138 (86%), Positives = 126/138 (91%), Gaps = 1/138 (0%)
 Frame = -3

Query: 600 VGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAAQSEKDALIDAVSILGEYLKEEP 421
           VGS KFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYA QSEKD LIDAVSILGEYLKEEP
Sbjct: 139 VGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEP 198

Query: 420 WLQLLCNHLKLNILEITGKAQVNAV-ESNSGLCNELQEKGDDKKAPTVKKGRQAKKLKLE 244
           WLQLLCNHLKLNILE+TGKAQ NA   +NS LCNELQE+ +DKK  T KKGRQAKK+KLE
Sbjct: 199 WLQLLCNHLKLNILEVTGKAQANAEGNNNSRLCNELQEQSNDKKGTTAKKGRQAKKVKLE 258

Query: 243 TESHNIKDMFSRASRKKN 190
           TESHNIKDMFSRASRKK+
Sbjct: 259 TESHNIKDMFSRASRKKS 276


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  170 bits (431), Expect = 2e-40
 Identities = 89/141 (63%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
 Frame = -3

Query: 600 VGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAAQSEKDALIDAVSILGEYLKEEP 421
           +GS KFFRLDDSKVL WLCYKV QLKQ LP LDKNYAA+ +KD L DA+SILGEYL++EP
Sbjct: 139 IGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEP 198

Query: 420 WLQLLCNHLKLNILEITGKAQV-----NAVESNSGLCNELQEK-GDDKKAPTVKKGRQAK 259
           WL+LLC+HLKLN+L+ T KA V      A +++ G  N+LQ K G+++K  T + G+Q K
Sbjct: 199 WLKLLCDHLKLNLLDATMKASVIEFHPTAPDNSLGSSNQLQGKSGNERK--TTRPGKQPK 256

Query: 258 KLKLETESHNIKDMFSRASRK 196
           K K+E +S NIKDMFSRASRK
Sbjct: 257 KAKVEKDSRNIKDMFSRASRK 277


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  170 bits (430), Expect = 2e-40
 Identities = 89/141 (63%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
 Frame = -3

Query: 600 VGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAAQSEKDALIDAVSILGEYLKEEP 421
           +GS KFFRLDDSKVL WLCYKV QLKQ LP LDKNYAA+ +KD L DA+SILGEYL++EP
Sbjct: 139 IGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEP 198

Query: 420 WLQLLCNHLKLNILEITGKAQV-----NAVESNSGLCNELQEK-GDDKKAPTVKKGRQAK 259
           WL+LLC+HLKLN+L+ T KA V      A +++ G  N+LQ K G+++K  T + G+Q K
Sbjct: 199 WLKLLCDHLKLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQGKSGNERK--TTRPGKQPK 256

Query: 258 KLKLETESHNIKDMFSRASRK 196
           K K+E +S NIKDMFSRASRK
Sbjct: 257 KAKVEKDSRNIKDMFSRASRK 277


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  162 bits (410), Expect = 4e-38
 Identities = 84/139 (60%), Positives = 104/139 (74%), Gaps = 3/139 (2%)
 Frame = -3

Query: 600 VGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAAQSEKDALIDAVSILGEYLKEEP 421
           +GS KFFRL+DSKV  WL  KV QLKQ +  LDKNYAAQ EK+ L DA+ ILGEYLK+EP
Sbjct: 162 IGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTLADAIMILGEYLKDEP 221

Query: 420 WLQLLCNHLKLNILEITGK---AQVNAVESNSGLCNELQEKGDDKKAPTVKKGRQAKKLK 250
           WL+LLCNHLKLN+LE T K   A+ +  E+N    N +QEKG +    T + G+QAKK K
Sbjct: 222 WLKLLCNHLKLNLLEATRKVPDAETSLTENNPASSNLMQEKGKN-DGKTKRTGKQAKKAK 280

Query: 249 LETESHNIKDMFSRASRKK 193
           +ETES NI++MFSRASR++
Sbjct: 281 VETESLNIREMFSRASRRR 299


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  157 bits (396), Expect = 2e-36
 Identities = 82/143 (57%), Positives = 103/143 (72%), Gaps = 7/143 (4%)
 Frame = -3

Query: 600 VGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAAQSEKDALIDAVSILGEYLKEEP 421
           VGS +FFRLDDSKVL WL +KVCQLK+TL  LDKNYAA+ EK+ L DAVSILGEYLK++P
Sbjct: 139 VGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQP 198

Query: 420 WLQLLCNHLKLNILEITGKAQVNAVESNSGLCNELQEKGDDKK-------APTVKKGRQA 262
           WL+LLC+HLKLN  E T KA  ++  + + + N       DK        A   + G+QA
Sbjct: 199 WLKLLCDHLKLNFAEATRKAS-DSERAPTSIENNFDSISQDKSGSRSGSGAKNTRNGKQA 257

Query: 261 KKLKLETESHNIKDMFSRASRKK 193
           KK K+ETES NIKDMFS+A+++K
Sbjct: 258 KKPKVETESRNIKDMFSKAAKRK 280


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