BLASTX nr result

ID: Glycyrrhiza23_contig00011274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011274
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527285.1| PREDICTED: uncharacterized protein LOC100818...    82   1e-13
gb|ADL36671.1| COL domain class transcription factor [Malus x do...    69   9e-11
gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]       71   3e-10
ref|XP_002869569.1| hypothetical protein ARALYDRAFT_913814 [Arab...    70   5e-10
ref|XP_002317533.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-10

>ref|XP_003527285.1| PREDICTED: uncharacterized protein LOC100818267 [Glycine max]
          Length = 216

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 732 EHNQNQCALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTCH 574
           E +   C LCE +A M CDS+QAKLC  CDE+VH+ANFLVAKHSRVLLC  CH
Sbjct: 2   EESSTTCVLCEKRAMMLCDSDQAKLCWECDEKVHSANFLVAKHSRVLLCRLCH 54


>gb|ADL36671.1| COL domain class transcription factor [Malus x domestica]
          Length = 144

 Score = 68.6 bits (166), Expect(2) = 9e-11
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = -3

Query: 717 QCALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTC 577
           +C LC+  A + CDS+QA LC +CD +VH ANFLVAKHSR LLC  C
Sbjct: 3   KCDLCDSAAKVYCDSDQASLCWDCDVKVHGANFLVAKHSRTLLCHVC 49



 Score = 24.3 bits (51), Expect(2) = 9e-11
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 503 TCVRDDRLHHHHDYVEDDGEYSSDHG 426
           +CV ++  +HH D  EDD +     G
Sbjct: 71  SCVNNNEGNHHQDEDEDDDDEEGQDG 96


>gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 714 CALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTCH-PSLHGIEGSSSV 538
           C LC G A M C+S+QA LC +CDE+VH+ANFLVAKH R LLC  C  P+     GS   
Sbjct: 4   CELCGGSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQVCQSPTPWKSSGSKLA 63

Query: 537 TVAS 526
            + S
Sbjct: 64  PIVS 67


>ref|XP_002869569.1| hypothetical protein ARALYDRAFT_913814 [Arabidopsis lyrata subsp.
           lyrata] gi|297315405|gb|EFH45828.1| hypothetical protein
           ARALYDRAFT_913814 [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -3

Query: 717 QCALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTC 577
           +C LC G A M C+S+QA LC +CD +VH ANFLVAKH+R LLCS C
Sbjct: 4   KCDLCSGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSAC 50


>ref|XP_002317533.1| predicted protein [Populus trichocarpa] gi|222860598|gb|EEE98145.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -3

Query: 732 EHNQNQCALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTCH-PSLHGI 556
           E     C LC   A M C+S+QA LC +CDE+VH ANFLVAKH R LLC  C  P+    
Sbjct: 83  EERMKGCELCGSSARMYCESDQASLCWDCDEKVHTANFLVAKHCRTLLCQVCQSPTPWKA 142

Query: 555 EGSSSVTVASQIDAPG 508
            GS      S +   G
Sbjct: 143 SGSKFAPTVSVVPWSG 158



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -3

Query: 714 CALCEGKATMQCDSNQAKLC*NCDERVHNANFLVAKHSRVLLCSTC 577
           C LC   A M C+S++A LC +CDE+VH+ANFLVAKH R LLC  C
Sbjct: 4   CELCGSSARMFCESDEASLCWDCDEKVHSANFLVAKHCRTLLCQVC 49


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