BLASTX nr result

ID: Glycyrrhiza23_contig00011273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011273
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG50071.1| transcription factor C2C2-Dof [Lotus japonicus]       126   2e-27
ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [G...   105   3e-21
ref|XP_003556422.1| PREDICTED: dof zinc finger protein DOF4.6-li...   105   5e-21
ref|XP_003556421.1| PREDICTED: dof zinc finger protein DOF4.6-li...   105   5e-21
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...    99   5e-19

>dbj|BAG50071.1| transcription factor C2C2-Dof [Lotus japonicus]
          Length = 275

 Score =  126 bits (317), Expect = 2e-27
 Identities = 72/119 (60%), Positives = 85/119 (71%), Gaps = 4/119 (3%)
 Frame = -1

Query: 347 LELLTGMTPSSTG--GLQYSFMPVP--ADPNSTHVYSTCGFPLHDFKPALNFSLDHGIGG 180
           L LLTG+T SS+   GLQYSFMPVP  ADPN+  VY+TCGFP+HDFKP LNF+LD   G 
Sbjct: 158 LGLLTGITSSSSSSRGLQYSFMPVPVSADPNT--VYTTCGFPMHDFKPTLNFTLD---GN 212

Query: 179 GSGYASLHQGVNHQETTSGRLLFPFEDLKQVPSNGTNPAMDQNNNKEQHGNSTTGYWTG 3
           GS YAS    V  Q+T++GR+LFPFEDLKQV S  T   MD NN+KE     + GYW+G
Sbjct: 213 GSDYASFQGHV--QDTSTGRVLFPFEDLKQVSS--TTARMDHNNDKEVQQGDSAGYWSG 267


>ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [Glycine max]
          Length = 269

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/116 (56%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
 Frame = -1

Query: 347 LELLTGMTPSSTGGLQYSFMPVPADPNSTHVYSTCGFPLHDFKP-ALNFSLDHGIGGGSG 171
           LELLTG+T SS+ GL  SFMP+P   N   +Y TCGFPL DFKP  LNFSLD   G G G
Sbjct: 165 LELLTGITSSSSTGLSTSFMPIPVPSNPNSIY-TCGFPLQDFKPGTLNFSLD---GIGKG 220

Query: 170 YASLHQGVNHQETTSGRLLFPFEDLKQVPSNGTNPAMDQNNNKEQHGNSTTGYWTG 3
           Y SL      Q    GRLLFPFEDLKQV S  T        N+ Q G+S TGYWTG
Sbjct: 221 YTSL------QNVHGGRLLFPFEDLKQVSSTTT-------MNQTQQGDS-TGYWTG 262


>ref|XP_003556422.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform 2 [Glycine
           max]
          Length = 293

 Score =  105 bits (261), Expect = 5e-21
 Identities = 69/117 (58%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
 Frame = -1

Query: 347 LELLTGMTPSSTGGLQYSFMPVP--ADPNSTHVYSTCGFPLHDFKPALNFSLDHGIGGGS 174
           LELLTG+T SS+ GL  SFMPVP  +DPNS +   TCGFPL DFKP LNFSLD   G G+
Sbjct: 189 LELLTGITSSSSAGLT-SFMPVPVPSDPNSIY---TCGFPLQDFKPTLNFSLD---GIGN 241

Query: 173 GYASLHQGVNHQETTSGRLLFPFEDLKQVPSNGTNPAMDQNNNKEQHGNSTTGYWTG 3
           GY SL      Q   SGRLLFP +DL+QV S+ T   MDQ    +Q G+S TGYWTG
Sbjct: 242 GYTSL------QNVQSGRLLFPSDDLRQV-SSSTITTMDQ----KQQGDS-TGYWTG 286


>ref|XP_003556421.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform 1 [Glycine
           max]
          Length = 302

 Score =  105 bits (261), Expect = 5e-21
 Identities = 69/117 (58%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
 Frame = -1

Query: 347 LELLTGMTPSSTGGLQYSFMPVP--ADPNSTHVYSTCGFPLHDFKPALNFSLDHGIGGGS 174
           LELLTG+T SS+ GL  SFMPVP  +DPNS +   TCGFPL DFKP LNFSLD   G G+
Sbjct: 198 LELLTGITSSSSAGLT-SFMPVPVPSDPNSIY---TCGFPLQDFKPTLNFSLD---GIGN 250

Query: 173 GYASLHQGVNHQETTSGRLLFPFEDLKQVPSNGTNPAMDQNNNKEQHGNSTTGYWTG 3
           GY SL      Q   SGRLLFP +DL+QV S+ T   MDQ    +Q G+S TGYWTG
Sbjct: 251 GYTSL------QNVQSGRLLFPSDDLRQV-SSSTITTMDQ----KQQGDS-TGYWTG 295


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 68/116 (58%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
 Frame = -1

Query: 347 LELLTGMTPSSTGGLQYSFMPVPA-DPNSTHVYSTCGFPLHDFKPALNFSLDHGIGGGSG 171
           LELLTG+   S+ GL  SFMP+P  DPNS +   T GFPL DFKP LNFSLD   G GSG
Sbjct: 202 LELLTGI---SSRGLN-SFMPMPVQDPNSVY---TSGFPLQDFKPTLNFSLD---GLGSG 251

Query: 170 YASLHQGVNHQETTSGRLLFPFEDLKQVPSNGTNPAMDQNNNKEQHGNSTTGYWTG 3
           Y SL QGV   + T GRLLFPFEDLKQV S  T    D   N+EQ    + GYWTG
Sbjct: 252 YGSL-QGV---QETGGRLLFPFEDLKQVSSTST----DIEQNREQ--GDSAGYWTG 297


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