BLASTX nr result

ID: Glycyrrhiza23_contig00011269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011269
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525380.1| PREDICTED: zinc finger CCCH domain-containin...   511   e-142
ref|XP_003521790.1| PREDICTED: zinc finger CCCH domain-containin...   503   e-140
ref|XP_003625944.1| Zinc finger CCCH domain-containing protein [...   488   e-135
ref|XP_003532007.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   478   e-132
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   440   e-121

>ref|XP_003525380.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Glycine
            max]
          Length = 329

 Score =  511 bits (1315), Expect = e-142
 Identities = 253/328 (77%), Positives = 264/328 (80%)
 Frame = +2

Query: 26   MEDSDQLAKSAENQQTEQVCSFFRKPVNKKNIRKRTIXXXXXXXXXXXXXXXIHIQKKTL 205
            MEDSDQ AKSAENQQTEQVCSFFRKPVNKKNIRKRTI               +HIQKKTL
Sbjct: 1    MEDSDQPAKSAENQQTEQVCSFFRKPVNKKNIRKRTIVNEDNEEDSNNETSLLHIQKKTL 60

Query: 206  KPDNKLFFSTXXXXXXXXXXXXXXXXXXVFHFESSKEIQVQHDNKATATLETETEFSKDA 385
            KPDNKL+FST                  VF FESSKEIQVQHD+KATATLETETEFSKDA
Sbjct: 61   KPDNKLYFSTGSSKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLETETEFSKDA 120

Query: 386  RAIRERALKQAAQSLKGKDTSSEDGKLYKGMNSYKDHKAGFRREQTIASEKAGGAHGPLR 565
            RAIRERALKQA +SLKGK  SS++ KLYKGMNSYKD+KAGFRREQTIASEKAGG+HGPLR
Sbjct: 121  RAIRERALKQAEESLKGKSPSSKNEKLYKGMNSYKDYKAGFRREQTIASEKAGGSHGPLR 180

Query: 566  ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLXXXXXXXXXXXX 745
            ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQ+            
Sbjct: 181  ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARK 240

Query: 746  MRLXXXXXXXXXXXNLTDEDDDDSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHAKN 925
            MRL           NLTDEDD+DSLPFACFICR  FVDPVVTKCKHYFCEHCALKHHAKN
Sbjct: 241  MRLAAGEDADEEGANLTDEDDEDSLPFACFICRNTFVDPVVTKCKHYFCEHCALKHHAKN 300

Query: 926  KKCYVCNQPTLGIFNVAHEIRRKMAEDK 1009
            KKC+VCNQPTLGIFNVAHEIRRKMAEDK
Sbjct: 301  KKCFVCNQPTLGIFNVAHEIRRKMAEDK 328


>ref|XP_003521790.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Glycine
            max]
          Length = 330

 Score =  503 bits (1294), Expect = e-140
 Identities = 251/329 (76%), Positives = 262/329 (79%), Gaps = 1/329 (0%)
 Frame = +2

Query: 26   MEDSDQLAKSAENQQTEQVCSFFRKPVNKKNIRKRTIXXXXXXXXXXXXXXXIHIQKKTL 205
            MEDSDQ AKSAENQQTEQVCSFFRKPVNKKN+RKRTI               +HIQKKTL
Sbjct: 1    MEDSDQPAKSAENQQTEQVCSFFRKPVNKKNLRKRTIEIEDNEEDSNNETSLLHIQKKTL 60

Query: 206  KPDNKLFFSTXXXXXXXXXXXXXXXXXXVFHFESSKEIQVQHDNKATATLETETEFSKDA 385
            K DNKL+FST                  VF FESSKEIQVQHD+KATA LETETEFSKDA
Sbjct: 61   KADNKLYFSTGSSKSSASAEPSEESGKTVFQFESSKEIQVQHDSKATAILETETEFSKDA 120

Query: 386  RAIRERALKQAAQSLKGKDTSSEDGKLYKGMNSYKDHKAGFRREQTIASEKAGGAHGPLR 565
            RAIRERALKQA +SLKGK  SSED KLYKGMNSYKD+KAGFRREQTIASEKAGG+HGPLR
Sbjct: 121  RAIRERALKQAEESLKGKSASSEDKKLYKGMNSYKDYKAGFRREQTIASEKAGGSHGPLR 180

Query: 566  ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLXXXXXXXXXXXX 745
            ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQ+            
Sbjct: 181  ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKQRK 240

Query: 746  MRL-XXXXXXXXXXXNLTDEDDDDSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHAK 922
            MRL            NLTDEDD+DSLPFACFICR  FVDPVVTKCKHYFCEHCALKHH+K
Sbjct: 241  MRLAAGEDADEEEGANLTDEDDEDSLPFACFICRNSFVDPVVTKCKHYFCEHCALKHHSK 300

Query: 923  NKKCYVCNQPTLGIFNVAHEIRRKMAEDK 1009
            NKKC+VCNQPTLGIFNVAHEIRRKMAEDK
Sbjct: 301  NKKCFVCNQPTLGIFNVAHEIRRKMAEDK 329


>ref|XP_003625944.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355500959|gb|AES82162.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 387

 Score =  488 bits (1257), Expect = e-135
 Identities = 241/336 (71%), Positives = 263/336 (78%), Gaps = 1/336 (0%)
 Frame = +2

Query: 5    YINQILSMEDSDQLAKSAENQQTEQVCSFFRKPVNKKNIRKRTIXXXXXXXXXXXXXXXI 184
            ++ ++ +MEDS+  AKS ENQQTEQVCSFFRKPVN+KN+RKRTI               +
Sbjct: 54   FLFKLFTMEDSE--AKSTENQQTEQVCSFFRKPVNRKNMRKRTIENEDNENDSNNEESLM 111

Query: 185  HIQKKTLKPDNKLFFSTXXXXXXXXXXXXXXXXXXVFHFESSKEIQVQHDNKATATLETE 364
            H+QKK  K DNKLFFST                   FHFESSKEIQVQHD+KATATLETE
Sbjct: 112  HVQKKNTKADNKLFFSTGSSKSSASAKPNEESEKPSFHFESSKEIQVQHDSKATATLETE 171

Query: 365  TEFSKDARAIRERALKQAAQSLKGKDTSSEDGKLYKGMNSYKDHKAGFRREQTIASEKAG 544
            T+FS+DARAIRERALKQA +SLKGK TSSED KLYKG+N+Y DHKAGFRREQTIASEKAG
Sbjct: 172  TDFSRDARAIRERALKQATESLKGKSTSSEDVKLYKGINNYTDHKAGFRREQTIASEKAG 231

Query: 545  GAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLXXXXX 724
            G+HGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQ+     
Sbjct: 232  GSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWD 291

Query: 725  XXXXXXXMRLXXXXXXXXXXXNLTDEDDD-DSLPFACFICRKPFVDPVVTKCKHYFCEHC 901
                   MRL           +L DEDDD D+LPFACFICR PFVDPV TKCKHYFCEHC
Sbjct: 292  EAEKARKMRLATGEDAEEEGASLNDEDDDEDALPFACFICRNPFVDPVSTKCKHYFCEHC 351

Query: 902  ALKHHAKNKKCYVCNQPTLGIFNVAHEIRRKMAEDK 1009
            ALKHHAKNKKC+VCNQPTLGIFNVAHEIR+KMAEDK
Sbjct: 352  ALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDK 387


>ref|XP_003532007.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 1-like [Glycine max]
          Length = 329

 Score =  478 bits (1230), Expect = e-132
 Identities = 241/329 (73%), Positives = 257/329 (78%), Gaps = 1/329 (0%)
 Frame = +2

Query: 26   MEDSDQLAKSAENQQTEQVCSFFRKPVNKKNIRKRTIXXXXXXXXXXXXXXXIHIQKKTL 205
            M DSDQL+KSA+NQ+TEQV SFFRKPVNKKNIRK+TI               +HIQKKTL
Sbjct: 1    MGDSDQLSKSAKNQKTEQVFSFFRKPVNKKNIRKQTIDNEDNEEDSNKESSLLHIQKKTL 60

Query: 206  KPDNKLFFSTXXXXXXXXXXXXXXXXXXVFHFESSKEIQVQHDNKATATLETETEFSKDA 385
            KPDNKL+FST                  VF FESSKEIQVQH +KATATLETETEFSKDA
Sbjct: 61   KPDNKLYFSTGSSKSSASAEPIEESGKPVFQFESSKEIQVQHGSKATATLETETEFSKDA 120

Query: 386  RAIRERALKQAAQSLKGKDTSSEDGKLYKGMNSYKDHKAGFRREQTIASEKAGGAHGPLR 565
            RAIRERALKQAA SLKGK  SSED KLYKG+N+YKD+KAGFRREQ IASEKAGG+HGPL 
Sbjct: 121  RAIRERALKQAAGSLKGKSASSEDEKLYKGINNYKDYKAGFRREQAIASEKAGGSHGPLW 180

Query: 566  ASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLXXXXXXXXXXXX 745
            ASAHIRVSARFDYQPDICKDYKETG CGY DSCKFMHD+GDYKSGWQ+            
Sbjct: 181  ASAHIRVSARFDYQPDICKDYKETGCCGYHDSCKFMHDQGDYKSGWQMEKEWEEVEKARK 240

Query: 746  MRL-XXXXXXXXXXXNLTDEDDDDSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHAK 922
            M+L            NLTDED+D SLPFACFICR PFVDPVVTKCK YFCEHCALKHHAK
Sbjct: 241  MKLAAGEDADEEEGANLTDEDEDGSLPFACFICRNPFVDPVVTKCKRYFCEHCALKHHAK 300

Query: 923  NKKCYVCNQPTLGIFNVAHEIRRKMAEDK 1009
            NKKC+VCNQPTLGIFNVAHEIRRKMAEDK
Sbjct: 301  NKKCFVCNQPTLGIFNVAHEIRRKMAEDK 329


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
            gi|223538607|gb|EEF40210.1| RING finger protein 113A,
            putative [Ricinus communis]
          Length = 325

 Score =  440 bits (1131), Expect = e-121
 Identities = 218/323 (67%), Positives = 240/323 (74%), Gaps = 2/323 (0%)
 Frame = +2

Query: 44   LAKSAENQQTEQVCSFFRKPVNKKNIRKRTIXXXXXXXXXXXXXXXIHIQKKTLKPDNKL 223
            +A S +++Q E VC+FFRKP+  KNIRKRTI               +H QKK  KPDNKL
Sbjct: 1    MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60

Query: 224  FFSTXXXXXXXXXXXXXXXXXX-VFHFESSKEIQVQHDNKATATLETETEFSKDARAIRE 400
            +FST                   VF FESSKEIQVQHD++ATATLETETEFSKDARAIRE
Sbjct: 61   YFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARAIRE 120

Query: 401  RALKQAAQSLKGKDTSSEDGKLYKGMNSYKDHKAGFRREQTIASEKAGGAHGPLRASAHI 580
            RALKQA ++LKGK  SS D KLYKG++ Y DHKAGFRREQTI+SEKAGG+HGPLRASAHI
Sbjct: 121  RALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 180

Query: 581  RVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLXXXXXXXXXXXXMRLXX 760
            RVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQL              L  
Sbjct: 181  RVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLAL 240

Query: 761  XXXXXXXXXNLTDEDDDD-SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHAKNKKCY 937
                     N  ++DDD+  LPFACFICR+PFVDPV TKCKHYFCEHCALKHHAKNKKC+
Sbjct: 241  GELEGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCF 300

Query: 938  VCNQPTLGIFNVAHEIRRKMAED 1006
            VCNQPTLGIFN AHEIR+ MAED
Sbjct: 301  VCNQPTLGIFNTAHEIRKMMAED 323


Top