BLASTX nr result

ID: Glycyrrhiza23_contig00011197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011197
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84293.1| unknown [Medicago truncatula]                           76   2e-12
ref|XP_003556432.1| PREDICTED: uncharacterized protein LOC100788...    75   7e-12
gb|AAD28760.1|AF130253_1 membrane related protein CP5 [Arabidops...    66   3e-09
ref|NP_176653.1| Polyketide cyclase/dehydrase and lipid transpor...    66   3e-09
gb|AAM91533.1| membrane related protein CP5, putative [Arabidops...    66   3e-09

>gb|ACJ84293.1| unknown [Medicago truncatula]
          Length = 249

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/74 (56%), Positives = 45/74 (60%), Gaps = 12/74 (16%)
 Frame = +1

Query: 292 IMDNIFRDLVMFIAPLWIAVIFGVVVGWAWKPKWAIHP-------NFLTFRFPW-----T 435
           +MD I  +LV FIAPLWIAVIFGVVVGWAWKPKWAI P       N   FR PW      
Sbjct: 9   VMD-ILGNLVTFIAPLWIAVIFGVVVGWAWKPKWAIEPNNYSWSTNLFKFRIPWFNYSEL 67

Query: 436 PNSPHLHHSQPSFS 477
            N P L +S  S S
Sbjct: 68  QNQPGLEYSATSSS 81


>ref|XP_003556432.1| PREDICTED: uncharacterized protein LOC100788121 [Glycine max]
          Length = 387

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +1

Query: 301 NIFRDLVMFIAPLWIAVIFGVVVGWAWKPKWAIHPN--FLTFRFPWTPNSPHLHHSQPSF 474
           +I  DL MFI PLWIAVI GVVVGWAWKPKWA HP    L FR P  PN      +  +F
Sbjct: 14  DIITDLAMFITPLWIAVIVGVVVGWAWKPKWAFHPKDALLKFRSPRPPNP----QNDTAF 69

Query: 475 SHSTTT 492
           ++S T+
Sbjct: 70  TYSATS 75


>gb|AAD28760.1|AF130253_1 membrane related protein CP5 [Arabidopsis thaliana]
          Length = 387

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +1

Query: 307 FRDLVMFIAPLWIAVIFGVVVGWAWKPKWAI--------HPNFLTFRFPWTPNSPHLHHS 462
           F DL++F+APLWIAV  GV+VGW W+PKWA          P FL  + P +      HH 
Sbjct: 17  FSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSILKTSSHHV 76

Query: 463 QPSFSHSTTT 492
            PS S    T
Sbjct: 77  NPSLSSKEKT 86


>ref|NP_176653.1| Polyketide cyclase/dehydrase and lipid transport-like protein
           [Arabidopsis thaliana]
           gi|5042409|gb|AAD38248.1|AC006193_4 Putative membrane
           related protein [Arabidopsis thaliana]
           gi|332196157|gb|AEE34278.1| Polyketide cyclase/dehydrase
           and lipid transport-like protein [Arabidopsis thaliana]
          Length = 385

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +1

Query: 307 FRDLVMFIAPLWIAVIFGVVVGWAWKPKWAI--------HPNFLTFRFPWTPNSPHLHHS 462
           F DL++F+APLWIAV  GV+VGW W+PKWA          P FL  + P +      HH 
Sbjct: 17  FSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSILKTSSHHV 76

Query: 463 QPSFSHSTTT 492
            PS S    T
Sbjct: 77  NPSLSSKEKT 86


>gb|AAM91533.1| membrane related protein CP5, putative [Arabidopsis thaliana]
           gi|23197608|gb|AAN15331.1| membrane related protein CP5,
           putative [Arabidopsis thaliana]
          Length = 385

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +1

Query: 307 FRDLVMFIAPLWIAVIFGVVVGWAWKPKWAI--------HPNFLTFRFPWTPNSPHLHHS 462
           F DL++F+APLWIAV  GV+VGW W+PKWA          P FL  + P +      HH 
Sbjct: 17  FSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSILKTSSHHV 76

Query: 463 QPSFSHSTTT 492
            PS S    T
Sbjct: 77  NPSLSSKEKT 86


Top