BLASTX nr result

ID: Glycyrrhiza23_contig00011196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011196
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycin...   141   5e-32
ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   137   9e-31
gb|AFK38601.1| unknown [Lotus japonicus]                              133   1e-29
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...   132   3e-29
gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum] g...   129   2e-28

>ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
           gi|255647255|gb|ACU24095.1| unknown [Glycine max]
          Length = 235

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/83 (80%), Positives = 68/83 (81%)
 Frame = +1

Query: 1   ILDDRPIRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEVQRQLV 180
           ILDDRPIRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQKELEVQRQLV
Sbjct: 99  ILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRQLV 158

Query: 181 DYGAGSLGSFPPVIPSSYGRHGG 249
           DYG GSLGSFPPVIP+SYGRHGG
Sbjct: 159 DYGTGSLGSFPPVIPTSYGRHGG 181


>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/83 (75%), Positives = 67/83 (80%)
 Frame = +1

Query: 1   ILDDRPIRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEVQRQLV 180
           +LDDRPIRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQ+ELE QRQLV
Sbjct: 99  VLDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLV 158

Query: 181 DYGAGSLGSFPPVIPSSYGRHGG 249
           DYG+GSLGSFPPV+PS YGRHGG
Sbjct: 159 DYGSGSLGSFPPVMPSQYGRHGG 181


>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/82 (75%), Positives = 66/82 (80%)
 Frame = +1

Query: 1   ILDDRPIRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEVQRQLV 180
           ILDDRPIRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQKELE QRQLV
Sbjct: 99  ILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLV 158

Query: 181 DYGAGSLGSFPPVIPSSYGRHG 246
           DYG+GSLGSFPP++ +SYGRHG
Sbjct: 159 DYGSGSLGSFPPMVSTSYGRHG 180


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/86 (76%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1   ILDDRPIRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPG---RGGYGKLVQKELEVQR 171
           ILDDRPIRVDFDWGF              VRDEYRTDYDP     GGYGKLVQKELEVQR
Sbjct: 99  ILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPDILLLGGYGKLVQKELEVQR 158

Query: 172 QLVDYGAGSLGSFPPVIPSSYGRHGG 249
           QLVDYGAGSLGSFPPVIP+SYGRHGG
Sbjct: 159 QLVDYGAGSLGSFPPVIPTSYGRHGG 184


>gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
           gi|261866539|gb|ACY02034.1| cap binding protein 20
           [Nicotiana tabacum]
          Length = 254

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/84 (73%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   ILDDRPIRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEVQRQLV 180
           ILDDRPIRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQKELE QRQLV
Sbjct: 99  ILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLV 158

Query: 181 DYGAGSLGSFPPVI-PSSYGRHGG 249
           DYG GSLG++PPV+ P  YGRHGG
Sbjct: 159 DYGTGSLGAYPPVMPPPHYGRHGG 182


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