BLASTX nr result

ID: Glycyrrhiza23_contig00011168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011168
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    65   1e-10
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   2e-09
gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]                  57   6e-09
ref|XP_002516137.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   1e-08

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 65.1 bits (157), Expect(2) = 1e-10
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = -3

Query: 209  PLSLKARVARILNMQIWENPGKYLGMPAEWGRSKTNELAWIRERVLAKMDGWKENLLNQA 30
            P  +   ++ I+ + +  +PG YLG+P  W RSK   L +I++ +L K+ GWK+  L+QA
Sbjct: 1337 PPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIKDSILRKVKGWKQATLSQA 1396

Query: 29   GKVVLIKAV 3
            GK VLIKAV
Sbjct: 1397 GKEVLIKAV 1405



 Score = 25.8 bits (55), Expect(2) = 1e-10
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 286  ILNTFSKASGQRINVAKSGGFVENSFP 206
            +L+T+  ASGQ INV KS  F   + P
Sbjct: 1311 LLHTYCIASGQLINVEKSSIFFSPNTP 1337


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 29/72 (40%), Positives = 47/72 (65%)
 Frame = -3

Query: 218 KFLPLSLKARVARILNMQIWENPGKYLGMPAEWGRSKTNELAWIRERVLAKMDGWKENLL 39
           K + ++ K  ++ IL M+  E   KYLG+P+  GRS+T     + +R+  K+ GWKE LL
Sbjct: 729 KGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLL 788

Query: 38  NQAGKVVLIKAV 3
           ++AGK +L+K+V
Sbjct: 789 SRAGKEILLKSV 800



 Score = 28.5 bits (62), Expect(2) = 2e-09
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 295 IIKILNTFSKASGQRINVAKS 233
           I++ILN + +ASGQ+IN  KS
Sbjct: 703 IVEILNLYEQASGQKINYDKS 723


>gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]
          Length = 237

 Score = 57.0 bits (136), Expect(2) = 6e-09
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -3

Query: 197 KARVARILNMQIWENPGKYLGMPAEWGRSKTNELAWIRERVLAKMDGWKENLLNQAGKVV 18
           K  + R L+M      G+YLG+P   GRSK     ++++R+  K  GWKE LL+  GK +
Sbjct: 64  KQAIVRQLHMPRSSGDGRYLGLPYLVGRSKREIFQYLKDRIWKKAHGWKEKLLSHGGKEI 123

Query: 17  LIKAV 3
           LIKAV
Sbjct: 124 LIKAV 128



 Score = 28.1 bits (61), Expect(2) = 6e-09
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 295 IIKILNTFSKASGQRINVAKSGGFVENS 212
           ++ +L T+ K  GQ+INV KS  F   S
Sbjct: 31  LLHVLTTYEKVLGQKINVTKSSIFFAKS 58


>ref|XP_002516137.1| conserved hypothetical protein [Ricinus communis]
           gi|223544623|gb|EEF46139.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 310

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = -3

Query: 218 KFLPLSLKARVARILNMQIWENPGKYLGMPAEWGRSKTNELAWIRERVLAKMDGWKENLL 39
           K  P  +K  V ++LNM+       +L +P+ WGRSK   L++++ER++ K+ GWK+ LL
Sbjct: 38  KDTPNQIKHNVKKVLNMKEMTGSEMHLRLPSLWGRSKIKTLSFLKERIIHKIQGWKQRLL 97

Query: 38  NQAGKVVLIKAV 3
           +QAG+  L KAV
Sbjct: 98  SQAGRKTLNKAV 109


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 57.0 bits (136), Expect(2) = 1e-08
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = -3

Query: 206 LSLKARVARILNMQIWENPGKYLGMPAEWGRSKTNELAWIRERVLAKMDGWKENLLNQAG 27
           +S K  +  ILNM+  +   KYLG+P+  GRSK      + +R+  K+ GWKE LL++AG
Sbjct: 733 VSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAG 792

Query: 26  KVVLIKAV 3
           K VL+K+V
Sbjct: 793 KEVLLKSV 800



 Score = 26.9 bits (58), Expect(2) = 1e-08
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 295 IIKILNTFSKASGQRINVAKS 233
           I+ ILN +  ASGQ+IN  KS
Sbjct: 703 IVDILNQYELASGQKINYEKS 723


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