BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011136
         (2061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546179.1| PREDICTED: transcription initiation factor I...   555   e-155
ref|XP_003534809.1| PREDICTED: transcription initiation factor I...   549   e-153
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...   510   e-142
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   497   e-138
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              493   e-137

>ref|XP_003546179.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 539

 Score =  555 bits (1430), Expect = e-155
 Identities = 272/320 (85%), Positives = 280/320 (87%)
 Frame = -1

Query: 1851 MSMDLQLKSSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 1672
            MS DLQLKSSCSGCGSTTDLYGSNCKHMTLCL+CGKTMAE RAKC+DCGATLTRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAEKRAKCFDCGATLTRLIREYN 60

Query: 1671 VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGFQGRQITDTLREKYKNKPWLL 1492
            VRASS NDKNYFIGRF+ GLPDFSKKKSAENKWSLQKDG  GRQITDTLREKYKNKPWLL
Sbjct: 61   VRASSTNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120

Query: 1491 EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1312
            EDETGQSQ+QGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1311 KNRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGKSRKKTGEDDEGHVSDKGX 1132
            KNRKKTADGYQRWMMKAANNGPAAFGEHGKF+DKESNTGG + RKKTGEDDEGHVSDKG 
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDKESNTGGVRIRKKTGEDDEGHVSDKGE 240

Query: 1131 XXXXXXXERKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 952
                   ERK+RLGLNKR+                        DWEHEEIFTDDDEAVGN
Sbjct: 241  EDEEEESERKSRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN 300

Query: 951  DPEEREDLAPEVPAPPEIKQ 892
            DPEEREDLAPEVPAPPEIKQ
Sbjct: 301  DPEEREDLAPEVPAPPEIKQ 320



 Score =  154 bits (390), Expect(2) = 2e-63
 Identities = 79/104 (75%), Positives = 86/104 (82%)
 Frame = -2

Query: 683 EAGVPPVTASKQKDAPKEEPVDNSPSKPTATGPSRGTPTSKSSKGKRKANEEAKPSNGAP 504
           + GVPP  A+KQKDA KEEPVDNSPSKPTATGP+RGTP+SKSSKGKRK NEEAKPSN AP
Sbjct: 370 DVGVPPAIATKQKDALKEEPVDNSPSKPTATGPARGTPSSKSSKGKRKLNEEAKPSNTAP 429

Query: 503 LKKVKTENETKSSAKDVNGSTTKSNAPSKGTPPPPASSKTGSST 372
            KKVK ENE K S KD NGS +K++AP KGT  PP SSK GSST
Sbjct: 430 PKKVKVENEPKVSTKDGNGSASKNSAPPKGT--PPLSSKAGSST 471



 Score =  116 bits (291), Expect(2) = 2e-63
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -3

Query: 304 SGPVSEEEIRAVLMQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTTNGSSY 125
           SGPVSEEEIRAVL QKTPVTTQDLVAKFKARLR SEDKQAFAEILKRISKIQKTT+G+SY
Sbjct: 474 SGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTSGASY 533

Query: 124 VILRER 107
           VILR++
Sbjct: 534 VILRDK 539


>ref|XP_003534809.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 541

 Score =  549 bits (1414), Expect = e-153
 Identities = 270/320 (84%), Positives = 276/320 (86%)
 Frame = -1

Query: 1851 MSMDLQLKSSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 1672
            MS DLQLKSSCSGCGSTTDLYGSNCKHMTLCL CGKTMA  RAKC DCGATLTRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60

Query: 1671 VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGFQGRQITDTLREKYKNKPWLL 1492
            VRASS NDKNYFIGRF+ GLPDFSKKKSAENKWSLQKDG  GRQITDTLREKYKNKPWLL
Sbjct: 61   VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120

Query: 1491 EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1312
            EDETGQSQ+QGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1311 KNRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGKSRKKTGEDDEGHVSDKGX 1132
            KNRKKTADGYQRWMMKAANNGPAAFGEHGKF+D ESNTGGG+S KKT EDDEGHVSDKG 
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVSDKGE 240

Query: 1131 XXXXXXXERKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 952
                   ERK+RLGLNKR+                        DWEHEEIFTDDDEAVGN
Sbjct: 241  EDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN 300

Query: 951  DPEEREDLAPEVPAPPEIKQ 892
            DPEEREDLAPEVPAPPEIKQ
Sbjct: 301  DPEEREDLAPEVPAPPEIKQ 320



 Score =  155 bits (393), Expect(2) = 4e-64
 Identities = 80/104 (76%), Positives = 87/104 (83%)
 Frame = -2

Query: 683 EAGVPPVTASKQKDAPKEEPVDNSPSKPTATGPSRGTPTSKSSKGKRKANEEAKPSNGAP 504
           + GVPPV A+KQKDA KEEP+DNSPSKPTATGP+RGTP+SKSSKGKRK NEE KPSN A 
Sbjct: 370 DVGVPPVIATKQKDALKEEPIDNSPSKPTATGPARGTPSSKSSKGKRKLNEETKPSNTAT 429

Query: 503 LKKVKTENETKSSAKDVNGSTTKSNAPSKGTPPPPASSKTGSST 372
            KKVK ENE K SAKDVNGS +KS+AP KGT  PP SSK GSST
Sbjct: 430 PKKVKAENEPKLSAKDVNGSASKSSAPPKGT--PPLSSKGGSST 471



 Score =  117 bits (294), Expect(2) = 4e-64
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = -3

Query: 307 ASGPVSEEEIRAVLMQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTTNGSS 128
           ASGPVSEEEIRAVL QKTPVTTQDLVAKFKARLR SEDKQAFAEILKRISKIQKTT G+S
Sbjct: 475 ASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGAS 534

Query: 127 YVILRER 107
           YVILR++
Sbjct: 535 YVILRDK 541


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| Transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  510 bits (1314), Expect = e-142
 Identities = 252/319 (78%), Positives = 265/319 (83%), Gaps = 1/319 (0%)
 Frame = -1

Query: 1845 MDLQLKSSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYNVR 1666
            MDLQLKSSCSGCG TT LYGSNCKH+T+C  CGKTMAENR+KC  CGA LTRLIREYNVR
Sbjct: 1    MDLQLKSSCSGCGETTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVR 60

Query: 1665 ASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGFQGRQITDTLREKYKNKPWLLED 1486
            ASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDG +GRQ+TD  REKYKN+PWLLED
Sbjct: 61   ASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLED 120

Query: 1485 ETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN 1306
            ETGQSQ+QGHLEGSQSATYYLLMKE+KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
Sbjct: 121  ETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN 180

Query: 1305 RKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGKSRKKTGED-DEGHVSDKGXX 1129
            RKKTADGYQRWMMKAANNGPAAFGEHGK +DKESN GGG+ RKKTG+D DEG  SDKG  
Sbjct: 181  RKKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEE 240

Query: 1128 XXXXXXERKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGND 949
                  +RK R    K +                        DWEHEEIFTDDDEAVGND
Sbjct: 241  DEDEEVDRKKRPN-KKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGND 299

Query: 948  PEEREDLAPEVPAPPEIKQ 892
            PEEREDLAPEVPAPPEIKQ
Sbjct: 300  PEEREDLAPEVPAPPEIKQ 318



 Score =  159 bits (402), Expect(2) = 2e-61
 Identities = 83/103 (80%), Positives = 90/103 (87%)
 Frame = -2

Query: 683 EAGVPPVTASKQKDAPKEEPVDNSPSKPTATGPSRGTPTSKSSKGKRKANEEAKPSNGAP 504
           E GVP VTA+KQK+ PKEEPVDNSPSKPTATGP+RGTPTSKSSK KRKANEEAKPS   P
Sbjct: 369 EDGVPAVTATKQKE-PKEEPVDNSPSKPTATGPARGTPTSKSSKAKRKANEEAKPSISVP 427

Query: 503 LKKVKTENETKSSAKDVNGSTTKSNAPSKGTPPPPASSKTGSS 375
            KKVKTENE KSSAKDVNGS++KSNAP +GTPPP  SS +GSS
Sbjct: 428 PKKVKTENEPKSSAKDVNGSSSKSNAPPRGTPPP--SSNSGSS 468



 Score =  105 bits (261), Expect(2) = 2e-61
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = -3

Query: 307 ASGPVSEEEIRAVLMQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTTNGSS 128
           ASGPV+EEEI+AVL+Q+TP+TTQ+LVAKF+ARLR  EDK+AFA ILKRISKIQK TNGSS
Sbjct: 471 ASGPVTEEEIKAVLLQRTPLTTQELVAKFRARLRCKEDKEAFANILKRISKIQK-TNGSS 529

Query: 127 YVILRER 107
           YVILRE+
Sbjct: 530 YVILREK 536


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  497 bits (1279), Expect = e-138
 Identities = 241/320 (75%), Positives = 265/320 (82%), Gaps = 1/320 (0%)
 Frame = -1

Query: 1848 SMDLQLKSSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYNV 1669
            +MDL LK SCSGCGSTTDLYGSNCKHMTLCL+CGKTMAEN AKC+DCGAT++RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 1668 RASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGFQGRQITDTLREKYKNKPWLLE 1489
            RASS++DKNYFIGRF+TGLP FSKKK+AENKWSLQK+G QGRQ+TD LREKYKN+PWLLE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 1488 DETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 1309
            DETGQ QYQGHLEGSQSATYYLL+ + KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 1308 NRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGKSRKK-TGEDDEGHVSDKGX 1132
            NR+KTADGY+RWMMKAANNGPAAFGE  K +DK+S    G+ RKK  G+D+EG+VSD+G 
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242

Query: 1131 XXXXXXXERKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 952
                    RKNRLGLNKR                         DWEHEEIFTDDDEAVGN
Sbjct: 243  EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302

Query: 951  DPEEREDLAPEVPAPPEIKQ 892
            D EEREDLAPEVPAPPEIKQ
Sbjct: 303  DREEREDLAPEVPAPPEIKQ 322



 Score =  102 bits (255), Expect(2) = 3e-42
 Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
 Frame = -2

Query: 683 EAGVPPVTASKQKDAPKEEPVDNSPSKPTATGPSRGTP-TSKSSKGKRKAN-EEAKPSNG 510
           +  + PV A KQ   PKEEP DNSP+KP  +  S+GTP TSKS+KGKRK N +EAK +N 
Sbjct: 370 DVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNSDEAKQTNV 427

Query: 509 APLKKVKTENETKSSAKDVNGSTTKSNAPSKGTPPPPASSKTGSST 372
           AP KKVKTENE K + K+ +  T+KS+A  K  PP   S+KTGS++
Sbjct: 428 APQKKVKTENELKPTVKEESAPTSKSSATPKAAPP---SAKTGSTS 470



 Score = 97.8 bits (242), Expect(2) = 3e-42
 Identities = 49/67 (73%), Positives = 63/67 (94%)
 Frame = -3

Query: 307 ASGPVSEEEIRAVLMQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTTNGSS 128
           ++ PV+EEEIRAVL+Q  PVTTQDLVA+FK+RL+SSEDK+AFA+IL+RISKIQK T+GSS
Sbjct: 468 STSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQK-TSGSS 526

Query: 127 YVILRER 107
           YV+LR++
Sbjct: 527 YVVLRDK 533


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  493 bits (1269), Expect = e-137
 Identities = 243/323 (75%), Positives = 263/323 (81%), Gaps = 3/323 (0%)
 Frame = -1

Query: 1851 MSMDLQLKSSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 1672
            MS DL LK SCSGCGSTTDLYGSNCKHMTLCL+CGKTMAEN  KCYDCG  +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 1671 VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGFQGRQITDTLREKYKNKPWLL 1492
            VR +S+ DKNYFIGRF+TGLP FSKKK+A+NKWSL K+G QGRQ++D LREKYKNKPWLL
Sbjct: 61   VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 1491 EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1312
            EDETGQ QY G LEGSQSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1311 KNRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESN--TGGGKSRKK-TGEDDEGHVSD 1141
            KNR++TADGYQRWMMKAANNGPAAFGE  K +DKE+    GGG+ RKK TG+++EG+VSD
Sbjct: 181  KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 1140 KGXXXXXXXXERKNRLGLNKRSXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 961
            K         ERKNRLGLNKRS                        DWEHEEIFTDDDEA
Sbjct: 241  KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA 300

Query: 960  VGNDPEEREDLAPEVPAPPEIKQ 892
            VGNDPEEREDLAPEVPAPPEIKQ
Sbjct: 301  VGNDPEEREDLAPEVPAPPEIKQ 323



 Score =  111 bits (278), Expect(2) = 7e-46
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
 Frame = -2

Query: 683 EAGVPPVTASKQKDAPKEEPVDNSPSKPTATGPSRGTP-TSKSSKGKRKAN-EEAKPSNG 510
           E G+ PV A KQKD PKEEP DNSP K +AT  +R TP TSKSSKGKRK+N ++ K +NG
Sbjct: 371 EIGLSPVLAPKQKDVPKEEPADNSPMK-SATASARSTPPTSKSSKGKRKSNGDDMKTTNG 429

Query: 509 APLKKVKTENETKSSAKDVNGSTTKSNAPSKGTPPPPASSKTGSST 372
            P KKVKTENE+KSSAKD   S +K  A  KGT  P +S KTGS++
Sbjct: 430 GPPKKVKTENESKSSAKDEGPSPSKVTATPKGT--PSSSVKTGSTS 473



 Score =  101 bits (251), Expect(2) = 7e-46
 Identities = 50/67 (74%), Positives = 63/67 (94%)
 Frame = -3

Query: 307 ASGPVSEEEIRAVLMQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTTNGSS 128
           ++GPV+E+EIRAVL+QK PVTTQDLVAKFKARL+S EDK+AFA+IL+RISKIQK TNG +
Sbjct: 474 SAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQK-TNGPN 532

Query: 127 YVILRER 107
           YV+LR++
Sbjct: 533 YVVLRDK 539