BLASTX nr result

ID: Glycyrrhiza23_contig00011135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011135
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521484.1| PREDICTED: probable CCR4-associated factor 1...   438   e-120
ref|XP_003554457.1| PREDICTED: probable CCR4-associated factor 1...   434   e-119
ref|XP_003635867.1| CCR4-associated factor [Medicago truncatula]...   427   e-117
ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1...   361   2e-97
ref|XP_002323399.1| predicted protein [Populus trichocarpa] gi|2...   357   5e-96

>ref|XP_003521484.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like [Glycine
            max]
          Length = 274

 Score =  438 bits (1126), Expect = e-120
 Identities = 219/269 (81%), Positives = 238/269 (88%)
 Frame = -3

Query: 1086 VLTRSVWSSNLESEFKLIRSVIDLYPLISMDTEFPGVVVRQDAGNPAFRHRRSAPAAHYA 907
            +LTRSVWSSNLESEF LIRSVID +PLISMDTEFPGVVVR DAG+P+FRHR+  P AHYA
Sbjct: 8    ILTRSVWSSNLESEFDLIRSVIDSFPLISMDTEFPGVVVRPDAGDPSFRHRQ--PVAHYA 65

Query: 906  VLKANVDRLNLIQIGLTLSDHKGNLPTLGTSSSYIWEFNFKDFDVARDAHALDSVELLKR 727
            VLKANVDRL+LIQIGLTLSD+ GNLPTLGTS+++IWEFNFKDFDVARDAHA DSVELL+R
Sbjct: 66   VLKANVDRLHLIQIGLTLSDNAGNLPTLGTSNAFIWEFNFKDFDVARDAHAHDSVELLRR 125

Query: 726  QGIDFDRNREFGIDSVRFAELMMSSGLICDDTVSWVTFHSAYDFGYLVKLLTQRALPEEL 547
            QGIDF++NR+FGIDS RFAELMMSSGL+CDD VSWVTFHSAYDFGYLVKL+T R LPEEL
Sbjct: 126  QGIDFEKNRDFGIDSFRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLMTHRTLPEEL 185

Query: 546  AEXXXXXXXXXXXXXXXVKHLMRFCSNLHGGLDRVCESLKVERLIGKSHQAGSDSLLTLH 367
             E               VKHLMRFCSNLHGGLDRVC+SLKVER+IGKSHQAGSDSLLTLH
Sbjct: 186  REFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLDRVCQSLKVERVIGKSHQAGSDSLLTLH 245

Query: 366  AFQNIRELYFGKADGFVKYAGVLYGLEVF 280
            AFQNIRE YF KADG V+YAGVLYGLEVF
Sbjct: 246  AFQNIRENYFDKADGLVQYAGVLYGLEVF 274


>ref|XP_003554457.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like [Glycine
            max]
          Length = 274

 Score =  434 bits (1117), Expect = e-119
 Identities = 216/269 (80%), Positives = 240/269 (89%)
 Frame = -3

Query: 1086 VLTRSVWSSNLESEFKLIRSVIDLYPLISMDTEFPGVVVRQDAGNPAFRHRRSAPAAHYA 907
            +LTRSVWSSNLESEF LIRSVID +PLISMDTEFPGVVVR DA +P+FRHR+  PAAHYA
Sbjct: 8    ILTRSVWSSNLESEFDLIRSVIDSFPLISMDTEFPGVVVRPDACDPSFRHRQ--PAAHYA 65

Query: 906  VLKANVDRLNLIQIGLTLSDHKGNLPTLGTSSSYIWEFNFKDFDVARDAHALDSVELLKR 727
            VLKANVDRL+LIQIGLTLSD+ GNLPTLGTS+++IWEFNF+DFDV RDAHA DSVELL+R
Sbjct: 66   VLKANVDRLHLIQIGLTLSDNAGNLPTLGTSNAFIWEFNFRDFDVVRDAHAHDSVELLRR 125

Query: 726  QGIDFDRNREFGIDSVRFAELMMSSGLICDDTVSWVTFHSAYDFGYLVKLLTQRALPEEL 547
            QGIDF++NR+FGIDS RFAELMMSSGL+CD+ VSWVTFHSAYDFGYLVKLLT RALPEEL
Sbjct: 126  QGIDFEKNRDFGIDSFRFAELMMSSGLVCDNAVSWVTFHSAYDFGYLVKLLTHRALPEEL 185

Query: 546  AEXXXXXXXXXXXXXXXVKHLMRFCSNLHGGLDRVCESLKVERLIGKSHQAGSDSLLTLH 367
             E               VKHLMRFCSNLHGGL+RVC+SLKVER++GKSHQAGSDSLLTLH
Sbjct: 186  REFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLNRVCQSLKVERVLGKSHQAGSDSLLTLH 245

Query: 366  AFQNIRELYFGKADGFVKYAGVLYGLEVF 280
            AFQNIRE+YFGKADG V+YAGVLYGL+VF
Sbjct: 246  AFQNIREIYFGKADGLVQYAGVLYGLDVF 274


>ref|XP_003635867.1| CCR4-associated factor [Medicago truncatula]
            gi|355501802|gb|AES83005.1| CCR4-associated factor
            [Medicago truncatula]
          Length = 445

 Score =  427 bits (1097), Expect = e-117
 Identities = 219/285 (76%), Positives = 239/285 (83%), Gaps = 9/285 (3%)
 Frame = -3

Query: 1110 KTLAEAMP---------VLTRSVWSSNLESEFKLIRSVIDLYPLISMDTEFPGVVVRQDA 958
            KTL E++P         +LTRSVWSSNL+ EF+LIRS+ID YPLISMDTEFPGV+VR D 
Sbjct: 6    KTLTESIPLSPRSSNGSILTRSVWSSNLDHEFELIRSLIDQYPLISMDTEFPGVIVRADP 65

Query: 957  GNPAFRHRRSAPAAHYAVLKANVDRLNLIQIGLTLSDHKGNLPTLGTSSSYIWEFNFKDF 778
            G+  F++R    A  YAVLKANVDRLNLIQIGLTLSDHKGNLPTL T +SYIWEFNFKDF
Sbjct: 66   GDSPFKNRG---ACLYAVLKANVDRLNLIQIGLTLSDHKGNLPTLDTENSYIWEFNFKDF 122

Query: 777  DVARDAHALDSVELLKRQGIDFDRNREFGIDSVRFAELMMSSGLICDDTVSWVTFHSAYD 598
            DVARD HA DSVELL+RQGIDF++NRE GIDSV+FAELMMSSGL+C D+VSWVTFHSAYD
Sbjct: 123  DVARDDHAADSVELLRRQGIDFEKNRECGIDSVKFAELMMSSGLVCADSVSWVTFHSAYD 182

Query: 597  FGYLVKLLTQRALPEELAEXXXXXXXXXXXXXXXVKHLMRFCSNLHGGLDRVCESLKVER 418
            FGYLVKLLTQR LP++L E               VKHLMRFC+NLHGGLDRVC SLKVER
Sbjct: 183  FGYLVKLLTQRLLPDDLEEFLRLVKVFFGDKVFDVKHLMRFCTNLHGGLDRVCRSLKVER 242

Query: 417  LIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEV 283
            LIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEV
Sbjct: 243  LIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEV 287


>ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Vitis
            vinifera]
          Length = 278

 Score =  361 bits (927), Expect = 2e-97
 Identities = 182/270 (67%), Positives = 211/270 (78%)
 Frame = -3

Query: 1089 PVLTRSVWSSNLESEFKLIRSVIDLYPLISMDTEFPGVVVRQDAGNPAFRHRRSAPAAHY 910
            PV+ R VW+ NLESEF+LI  +ID YP ISMDTEFPGVV R   G   FR RR  P+ HY
Sbjct: 12   PVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRR--PSDHY 69

Query: 909  AVLKANVDRLNLIQIGLTLSDHKGNLPTLGTSSSYIWEFNFKDFDVARDAHALDSVELLK 730
              LK+NVD L LIQ+GLTLSD  GNLP LGT + +IWEFNF+DFDVARDAHA DS+ELL 
Sbjct: 70   RFLKSNVDALCLIQVGLTLSDANGNLPDLGTGNRFIWEFNFRDFDVARDAHAPDSIELLS 129

Query: 729  RQGIDFDRNREFGIDSVRFAELMMSSGLICDDTVSWVTFHSAYDFGYLVKLLTQRALPEE 550
            RQGIDFDRNRE G+DS RFAELMMSSGL+C+++VSWVTFHSAYDFGYLVK+LT+R+LP  
Sbjct: 130  RQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSG 189

Query: 549  LAEXXXXXXXXXXXXXXXVKHLMRFCSNLHGGLDRVCESLKVERLIGKSHQAGSDSLLTL 370
            L E               VKHLM+FC++L+GGLDRV  +L+V+R +GK HQAGSDSLLT 
Sbjct: 190  LEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTW 249

Query: 369  HAFQNIRELYFGKADGFVKYAGVLYGLEVF 280
            HAFQ IR++YF K DG  KYAGVLYGLEVF
Sbjct: 250  HAFQKIRDVYFEK-DGTEKYAGVLYGLEVF 278


>ref|XP_002323399.1| predicted protein [Populus trichocarpa] gi|222868029|gb|EEF05160.1|
            predicted protein [Populus trichocarpa]
          Length = 296

 Score =  357 bits (915), Expect = 5e-96
 Identities = 186/286 (65%), Positives = 211/286 (73%), Gaps = 14/286 (4%)
 Frame = -3

Query: 1095 AMPVLTRSVWSSNLESEFKLIRSVIDLYPLISMDTEFPGVVVRQDAGNPAFRHRRSAPAA 916
            A  V+ RSVW+ NLE EFKLIRS ID YPLISMDTEFPG+VVR  AG+P  RH  S P A
Sbjct: 12   AKTVVIRSVWADNLEEEFKLIRSEIDRYPLISMDTEFPGIVVRPAAGDPYNRH--SGPRA 69

Query: 915  HYAVLKANVDRLNLIQIGLTLSDHKGNLPTLGTSS-SYIWEFNFKDFDVARDAHALDSVE 739
            HY  LKANVD LNLIQIGLT++D  GNLP LG     +IWEFNF+DFDVARDAHA DSVE
Sbjct: 70   HYLSLKANVDLLNLIQIGLTIADEDGNLPDLGLKDVGFIWEFNFRDFDVARDAHAHDSVE 129

Query: 738  LLKRQGIDFDRNREFGIDSVRFAELMMSSGLICDDTVSWVTFHSAYDFGYLVKLLTQRAL 559
            LL+RQGIDF++NRE GIDSV+FAELMMSSGL+ + +VSWVTFH AYDFGYLVK LTQ+ L
Sbjct: 130  LLRRQGIDFEKNRELGIDSVKFAELMMSSGLVLNHSVSWVTFHCAYDFGYLVKCLTQKVL 189

Query: 558  PEELAEXXXXXXXXXXXXXXXVKHLMRFCSNLHGGLDRVCESLKVERLIGKSHQAGSDSL 379
            PEEL E               +KH+MRFC NLHGGLDRVC+ L V+R+IGKSHQAGSDSL
Sbjct: 190  PEELNEFFERVRVYFGDRVYDIKHIMRFCGNLHGGLDRVCKELGVDRVIGKSHQAGSDSL 249

Query: 378  LTLHAFQNIRELYF-------------GKADGFVKYAGVLYGLEVF 280
            LTLHA+  I++ YF             G   G  KYA V YGLE+F
Sbjct: 250  LTLHAYLKIKDKYFFNDKDDGRGGGGGGGGGGLDKYANVFYGLELF 295


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