BLASTX nr result

ID: Glycyrrhiza23_contig00011134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011134
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1...   200   1e-49
ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1...   199   3e-49
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002512788.1| WD-repeat protein, putative [Ricinus communi...   196   2e-48
ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48

>ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/95 (98%), Positives = 95/95 (100%)
 Frame = -2

Query: 289 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 110
           MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 109 VQLDDSNGEIRSDPNLSFEHPYPPTKSIFIPDKDC 5
           VQLDDSNGEIRSDP+LSFEHPYPPTKSIFIPDKDC
Sbjct: 61  VQLDDSNGEIRSDPSLSFEHPYPPTKSIFIPDKDC 95


>ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/95 (97%), Positives = 95/95 (100%)
 Frame = -2

Query: 289 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 110
           MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 109 VQLDDSNGEIRSDPNLSFEHPYPPTKSIFIPDKDC 5
           VQLDDSNGEIRSDP+LSFEHPYPPTK+IFIPDKDC
Sbjct: 61  VQLDDSNGEIRSDPSLSFEHPYPPTKAIFIPDKDC 95


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
           gi|224131364|ref|XP_002321066.1| predicted protein
           [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
           predicted protein [Populus trichocarpa]
           gi|222870324|gb|EEF07455.1| predicted protein [Populus
           trichocarpa]
          Length = 346

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/95 (96%), Positives = 94/95 (98%)
 Frame = -2

Query: 289 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 110
           MGASSDP QDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGASSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 109 VQLDDSNGEIRSDPNLSFEHPYPPTKSIFIPDKDC 5
           VQLDDSNGEIRSDPNLSFEHPYPPTK+IFIPDK+C
Sbjct: 61  VQLDDSNGEIRSDPNLSFEHPYPPTKTIFIPDKEC 95


>ref|XP_002512788.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547799|gb|EEF49291.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 346

 Score =  196 bits (498), Expect = 2e-48
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = -2

Query: 289 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 110
           MGASSDP QDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGASSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 109 VQLDDSNGEIRSDPNLSFEHPYPPTKSIFIPDKDC 5
           VQLDDSNGEIRSDPNLSFEHPYPPTK++FIPDK+C
Sbjct: 61  VQLDDSNGEIRSDPNLSFEHPYPPTKTMFIPDKEC 95


>ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|222843290|gb|EEE80837.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  194 bits (493), Expect = 6e-48
 Identities = 90/95 (94%), Positives = 93/95 (97%)
 Frame = -2

Query: 289 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 110
           MG SSDP QDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGGSSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 109 VQLDDSNGEIRSDPNLSFEHPYPPTKSIFIPDKDC 5
           VQLD+SNGEIRSDPNLSFEHPYPPTK+IFIPDK+C
Sbjct: 61  VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKEC 95


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