BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011081
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]    370   e-100
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M...   364   1e-98
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...   355   8e-96
ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotei...   352   5e-95
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei...   352   5e-95

>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score =  370 bits (949), Expect = e-100
 Identities = 184/233 (78%), Positives = 193/233 (82%)
 Frame = +2

Query: 188 MGDFNNDPLMRNQNSAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFXXXXXXXXX 367
           M D NNDPL+RNQN+AVQAR KAQNRANVLQLKLIGQSHPTGLT NLLKLF         
Sbjct: 1   MADPNNDPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTTNLLKLFEPRPPLEYK 60

Query: 368 XXXXXXXCPPLTGMAQFVSKFAEPGDPEYAPPKPVVETPVQRRARIHXXXXXXXXXXXXX 547
                  CPPLTGMAQFVSKFAEPG+PEY+PP PVVETP +RRAR+H             
Sbjct: 61  PPPEKRKCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAE 120

Query: 548 XXXXYDPNNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTETNKPK 727
               YDP+ DPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTE+NKP+
Sbjct: 121 ELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPR 180

Query: 728 GYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 886
           GYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG
Sbjct: 181 GYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 233


>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
           gi|355523491|gb|AET03945.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 502

 Score =  364 bits (935), Expect = 1e-98
 Identities = 181/227 (79%), Positives = 190/227 (83%)
 Frame = +2

Query: 206 DPLMRNQNSAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFXXXXXXXXXXXXXXX 385
           DPL+RNQN+AVQAR KAQNRANVLQLKLIGQSHPTGLTANLLKLF               
Sbjct: 3   DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62

Query: 386 XCPPLTGMAQFVSKFAEPGDPEYAPPKPVVETPVQRRARIHXXXXXXXXXXXXXXXXXYD 565
            CPPLTGMAQFVSKFAEPG+PEY+PP PVVETP +RRAR+H                 YD
Sbjct: 63  KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122

Query: 566 PNNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTETNKPKGYAFIE 745
           P+NDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTD E+NKP+GYAFIE
Sbjct: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIE 182

Query: 746 YLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 886
           YLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG
Sbjct: 183 YLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 229


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
           max]
          Length = 481

 Score =  355 bits (911), Expect = 8e-96
 Identities = 178/235 (75%), Positives = 189/235 (80%), Gaps = 2/235 (0%)
 Frame = +2

Query: 188 MGD--FNNDPLMRNQNSAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFXXXXXXX 361
           MGD   NND  MRNQN+AVQAR KAQNR+NVLQLKLIGQSHPTGLTANLLKLF       
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60

Query: 362 XXXXXXXXXCPPLTGMAQFVSKFAEPGDPEYAPPKPVVETPVQRRARIHXXXXXXXXXXX 541
                    CPPL+GMAQFVSKFA+PGDPEYAPP P  ETP Q+RARIH           
Sbjct: 61  YKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120

Query: 542 XXXXXXYDPNNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTETNK 721
                 YDP+NDPN+SGDPYKTLFVA+LSYETTESRIKREFESYG IKRVRLV D +TNK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNK 180

Query: 722 PKGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 886
           P+GYAFIEYLHTRDMKAAYKQADGRKI+GRRVLVDVERGRTVPNWRPRRLGGGLG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLG 235


>ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Glycine max]
          Length = 465

 Score =  352 bits (904), Expect = 5e-95
 Identities = 177/235 (75%), Positives = 188/235 (80%), Gaps = 2/235 (0%)
 Frame = +2

Query: 188 MGD--FNNDPLMRNQNSAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFXXXXXXX 361
           MGD   NND  MRNQN+AVQAR KAQNR+NVLQLKLIGQSHPTGLTANLLKLF       
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60

Query: 362 XXXXXXXXXCPPLTGMAQFVSKFAEPGDPEYAPPKPVVETPVQRRARIHXXXXXXXXXXX 541
                    CPPL+GMAQFVSKFAEPG+PEYAPP P  ETP Q+RARIH           
Sbjct: 61  YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120

Query: 542 XXXXXXYDPNNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTETNK 721
                 YDP+NDPN+SGDPYKTLFVA+LSYETTESRIKREFESYG IKRVRLV D + NK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINK 180

Query: 722 PKGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 886
           P+GYAFIEYLHTRDMKAAYKQADGRKI+GRRVLVDVERGRTVPNWRPRRLGGGLG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLG 235


>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Glycine max]
          Length = 482

 Score =  352 bits (904), Expect = 5e-95
 Identities = 177/235 (75%), Positives = 188/235 (80%), Gaps = 2/235 (0%)
 Frame = +2

Query: 188 MGD--FNNDPLMRNQNSAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFXXXXXXX 361
           MGD   NND  MRNQN+AVQAR KAQNR+NVLQLKLIGQSHPTGLTANLLKLF       
Sbjct: 1   MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60

Query: 362 XXXXXXXXXCPPLTGMAQFVSKFAEPGDPEYAPPKPVVETPVQRRARIHXXXXXXXXXXX 541
                    CPPL+GMAQFVSKFAEPG+PEYAPP P  ETP Q+RARIH           
Sbjct: 61  YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120

Query: 542 XXXXXXYDPNNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTETNK 721
                 YDP+NDPN+SGDPYKTLFVA+LSYETTESRIKREFESYG IKRVRLV D + NK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINK 180

Query: 722 PKGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 886
           P+GYAFIEYLHTRDMKAAYKQADGRKI+GRRVLVDVERGRTVPNWRPRRLGGGLG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLG 235