BLASTX nr result

ID: Glycyrrhiza23_contig00011047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011047
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555183.1| PREDICTED: RNA polymerase II-associated prot...   128   5e-28
ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1...   127   9e-28
ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1...   127   9e-28
ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1...   122   2e-26
ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycin...   121   5e-26

>ref|XP_003555183.1| PREDICTED: RNA polymerase II-associated protein 3-like [Glycine
           max]
          Length = 507

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/106 (58%), Positives = 70/106 (66%)
 Frame = -1

Query: 384 KLPKDARNVLMDWWNTHHRWPYPTEEEKVKLSDISGLDQKQINNWFXXXXXXXXXXXXXX 205
           KLPKDAR +LMDWWNTH+RWPYPTEEEKV+LS+++GLDQKQIN                 
Sbjct: 431 KLPKDARMILMDWWNTHYRWPYPTEEEKVQLSEMTGLDQKQIN----------------- 473

Query: 204 XXXXXXXXXXXXNWFINQRKRHWKPTEDVRFTIMGRVSDSGTRGPV 67
                       NWFINQRKRHWKPTED+RF IM  VS SG  GP+
Sbjct: 474 ------------NWFINQRKRHWKPTEDMRFAIMDGVSGSGLGGPM 507


>ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 2
           [Glycine max]
          Length = 293

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/106 (58%), Positives = 70/106 (66%)
 Frame = -1

Query: 384 KLPKDARNVLMDWWNTHHRWPYPTEEEKVKLSDISGLDQKQINNWFXXXXXXXXXXXXXX 205
           KLPKDAR VLMDWWNTH+RWPYPTEEEKV+LS+++GLDQKQIN                 
Sbjct: 217 KLPKDARMVLMDWWNTHYRWPYPTEEEKVQLSEMTGLDQKQIN----------------- 259

Query: 204 XXXXXXXXXXXXNWFINQRKRHWKPTEDVRFTIMGRVSDSGTRGPV 67
                       NWFINQRKRHWKP+ED+RF IM  VS SG  GP+
Sbjct: 260 ------------NWFINQRKRHWKPSEDMRFAIMDGVSGSGFGGPI 293


>ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 1
           [Glycine max]
          Length = 296

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/106 (58%), Positives = 70/106 (66%)
 Frame = -1

Query: 384 KLPKDARNVLMDWWNTHHRWPYPTEEEKVKLSDISGLDQKQINNWFXXXXXXXXXXXXXX 205
           KLPKDAR VLMDWWNTH+RWPYPTEEEKV+LS+++GLDQKQIN                 
Sbjct: 220 KLPKDARMVLMDWWNTHYRWPYPTEEEKVQLSEMTGLDQKQIN----------------- 262

Query: 204 XXXXXXXXXXXXNWFINQRKRHWKPTEDVRFTIMGRVSDSGTRGPV 67
                       NWFINQRKRHWKP+ED+RF IM  VS SG  GP+
Sbjct: 263 ------------NWFINQRKRHWKPSEDMRFAIMDGVSGSGFGGPI 296


>ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1-like [Glycine max]
          Length = 307

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/108 (56%), Positives = 67/108 (62%)
 Frame = -1

Query: 384 KLPKDARNVLMDWWNTHHRWPYPTEEEKVKLSDISGLDQKQINNWFXXXXXXXXXXXXXX 205
           KLPKDAR  LMDWWNTHHRWPYPTEEEKVKLS+I+GLDQKQIN                 
Sbjct: 234 KLPKDARIALMDWWNTHHRWPYPTEEEKVKLSEITGLDQKQIN----------------- 276

Query: 204 XXXXXXXXXXXXNWFINQRKRHWKPTEDVRFTIMGRVSDSGTRGPVFF 61
                       NWFINQRKRHWKPT+D+R  +M      G RGP+ F
Sbjct: 277 ------------NWFINQRKRHWKPTDDMRSAVM-----DGIRGPMLF 307


>ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycine max]
           gi|255639822|gb|ACU20204.1| unknown [Glycine max]
          Length = 311

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/111 (54%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = -1

Query: 384 KLPKDARNVLMDWWNTHHRWPYPTEEEKVKLSDISGLDQKQINNWFXXXXXXXXXXXXXX 205
           KLPKDAR  LM WWNTHHRWPYPTEEEKVKLS+I+GLDQKQIN                 
Sbjct: 230 KLPKDARMALMGWWNTHHRWPYPTEEEKVKLSEITGLDQKQIN----------------- 272

Query: 204 XXXXXXXXXXXXNWFINQRKRHWKPTEDVRFTIMGRV---SDSGTRGPVFF 61
                       NWFINQRKRHWKPTED+RF +M  +      G  GP+ F
Sbjct: 273 ------------NWFINQRKRHWKPTEDMRFAVMDGLRGGGGGGIGGPMLF 311


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