BLASTX nr result

ID: Glycyrrhiza23_contig00010996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010996
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597841.1| Cytochrome c oxidase subunit 5B [Medicago tr...   216   5e-54
dbj|BAF30481.1| cytochrome c oxidase subunit Vb [Pisum sativum] ...   212   9e-53
dbj|BAF30482.1| cytochrome c oxidase subunit Vb [Pisum sativum] ...   212   9e-53
ref|XP_003528355.1| PREDICTED: cytochrome c oxidase subunit 5b-2...   199   6e-49
gb|ACU24314.1| unknown [Glycine max]                                  199   6e-49

>ref|XP_003597841.1| Cytochrome c oxidase subunit 5B [Medicago truncatula]
           gi|355486889|gb|AES68092.1| Cytochrome c oxidase subunit
           5B [Medicago truncatula] gi|388495938|gb|AFK36035.1|
           unknown [Medicago truncatula]
          Length = 150

 Score =  216 bits (551), Expect = 5e-54
 Identities = 101/119 (84%), Positives = 113/119 (94%)
 Frame = -1

Query: 726 AVAGAATLRFAGLSRHVATQSAGSIKRKVEDVMPIATGHEREEIQAELEGKDILEINHPE 547
           AVAG   LRFAGLSRHVATQSAGS+K+ VEDV+PIATGHEREEIQA+LEG++ILEI+HPE
Sbjct: 25  AVAG---LRFAGLSRHVATQSAGSVKKTVEDVVPIATGHEREEIQADLEGRNILEIDHPE 81

Query: 546 GPFGTKEAPAIVRSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 370
           GPFGTKEAPA+V+SY++RRIVGCPGGEGEDEHDVVWFWLE+GKPHECPVC QYF LEVV
Sbjct: 82  GPFGTKEAPAVVKSYYNRRIVGCPGGEGEDEHDVVWFWLEEGKPHECPVCAQYFQLEVV 140


>dbj|BAF30481.1| cytochrome c oxidase subunit Vb [Pisum sativum]
           gi|113734317|dbj|BAF30484.1| cytochrome c oxidase
           subunit Vb [Pisum sativum]
          Length = 150

 Score =  212 bits (540), Expect = 9e-53
 Identities = 99/119 (83%), Positives = 111/119 (93%)
 Frame = -1

Query: 726 AVAGAATLRFAGLSRHVATQSAGSIKRKVEDVMPIATGHEREEIQAELEGKDILEINHPE 547
           AVAG   +R   LSRHVATQSA S+K++VEDV+PIATGHEREEIQAELEG++ILEI+HPE
Sbjct: 25  AVAG---IRCVDLSRHVATQSAASVKKRVEDVVPIATGHEREEIQAELEGRNILEIDHPE 81

Query: 546 GPFGTKEAPAIVRSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 370
           GPFGTK+APA+VRS++DRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYF LEVV
Sbjct: 82  GPFGTKDAPAVVRSFYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFELEVV 140


>dbj|BAF30482.1| cytochrome c oxidase subunit Vb [Pisum sativum]
           gi|113734319|dbj|BAF30485.1| cytochrome c oxidase
           subunit Vb [Pisum sativum]
          Length = 150

 Score =  212 bits (540), Expect = 9e-53
 Identities = 99/119 (83%), Positives = 111/119 (93%)
 Frame = -1

Query: 726 AVAGAATLRFAGLSRHVATQSAGSIKRKVEDVMPIATGHEREEIQAELEGKDILEINHPE 547
           AVAG   +R   LSRHVATQSA S+K++VEDV+PIATGHEREEIQAELEG++ILEI+HPE
Sbjct: 25  AVAG---IRCVDLSRHVATQSAASVKKRVEDVVPIATGHEREEIQAELEGRNILEIDHPE 81

Query: 546 GPFGTKEAPAIVRSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 370
           GPFGTK+APA+VRS++DRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYF LEVV
Sbjct: 82  GPFGTKDAPAVVRSFYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFELEVV 140


>ref|XP_003528355.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
           isoform 1 [Glycine max] gi|356519391|ref|XP_003528356.1|
           PREDICTED: cytochrome c oxidase subunit 5b-2,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 163

 Score =  199 bits (507), Expect = 6e-49
 Identities = 94/122 (77%), Positives = 110/122 (90%), Gaps = 5/122 (4%)
 Frame = -1

Query: 720 AGAATLRFAGLSR---HVATQS--AGSIKRKVEDVMPIATGHEREEIQAELEGKDILEIN 556
           + +A+ RFA LSR   + +TQS  A +IK+KVED+MPIATGHEREE+QAELEG++ILEI+
Sbjct: 27  SASASARFAALSRSCLYFSTQSEDATAIKKKVEDIMPIATGHEREELQAELEGRNILEID 86

Query: 555 HPEGPFGTKEAPAIVRSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLE 376
           HPEGPFGTKEAPA+V+SY+D+RIVGCPGGEGEDEHDVVWFWLEK KPHECPVC QYFVLE
Sbjct: 87  HPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLE 146

Query: 375 VV 370
           VV
Sbjct: 147 VV 148


>gb|ACU24314.1| unknown [Glycine max]
          Length = 162

 Score =  199 bits (507), Expect = 6e-49
 Identities = 94/122 (77%), Positives = 110/122 (90%), Gaps = 5/122 (4%)
 Frame = -1

Query: 720 AGAATLRFAGLSR---HVATQS--AGSIKRKVEDVMPIATGHEREEIQAELEGKDILEIN 556
           + +A+ RFA LSR   + +TQS  A +IK+KVED+MPIATGHEREE+QAELEG++ILEI+
Sbjct: 26  SASASARFAALSRSCLYFSTQSEDATAIKKKVEDIMPIATGHEREELQAELEGRNILEID 85

Query: 555 HPEGPFGTKEAPAIVRSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLE 376
           HPEGPFGTKEAPA+V+SY+D+RIVGCPGGEGEDEHDVVWFWLEK KPHECPVC QYFVLE
Sbjct: 86  HPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLE 145

Query: 375 VV 370
           VV
Sbjct: 146 VV 147


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