BLASTX nr result

ID: Glycyrrhiza23_contig00010971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010971
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    92   4e-17
ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    84   1e-14
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    82   4e-14
ref|XP_003599617.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    82   6e-14
ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    80   1e-13

>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = +2

Query: 32  PTFVNLIHLELSFEREDYDKKWDPESSYGRWEWRWEWVLEGLEHCPKLQNLNILDESYW- 208
           P F +LIHLELS              ++  W  RWEW+L  L+H PKLQNL I D     
Sbjct: 258 PMFESLIHLELSL-------------NFKIWYPRWEWLLGMLKHSPKLQNLTIQDNKAIE 304

Query: 209 --IYEEWMEPQTVAECLSSQLRTFSLRSYNGTRNELKFVKYIMQNSKV 346
             I E W +P  V ECLSSQL+T  +R Y GT+ +L+F KYIM+NSKV
Sbjct: 305 EAIDECWKDPPIVPECLSSQLKTCHIRVYKGTKYDLEFTKYIMENSKV 352


>ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500401|gb|AES81604.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = +2

Query: 20  YYDHPTFVNLIHLELSFEREDYDKKWDPESSYGRWEWRWEWVLEGLEHCPKLQNLNILDE 199
           Y   P F +L HLELSF  E Y+ KW             +W++  L+  PKLQNL I D 
Sbjct: 256 YMQFPMFESLTHLELSFNSEVYNPKW-------------KWLMRMLKLSPKLQNLIIKDN 302

Query: 200 SYW---IYEEWMEPQTVAECLSSQLRTFSLRSYNGTRNELKFVKYIMQNSKV 346
                 I E W +P  + ECLSSQL+T  +R + GT+ +L+F  YIM+NSKV
Sbjct: 303 EDLEEKIDECWKDPPNIPECLSSQLKTCRIRVFKGTQYDLQFAIYIMENSKV 354


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
 Frame = +2

Query: 5   NVHILY-YDHPTFVNLIHLELSFEREDYDKKWDPESSYGRWEWRWEWVLEGLEHCPKLQN 181
           NV+ +  Y+  TF+NL H+++ FE                W  +W+W+ + L+HCPKLQN
Sbjct: 212 NVYFIQKYELSTFLNLTHMKIVFELTH------------NWPGKWKWLTKVLQHCPKLQN 259

Query: 182 LNI----LDESYWIYEEWMEPQTVAECLSSQLRTFSLRSYNGTRNELKFVKYIMQNSKV 346
           L I     D +     +WM+   V EC SSQL+T SL  Y G   + +F KYI++N+KV
Sbjct: 260 LTIHEGSSDRNKIEDVDWMDTPIVPECFSSQLKTCSLIGYKGMNCDFQFAKYILKNAKV 318


>ref|XP_003599617.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355488665|gb|AES69868.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 363

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = +2

Query: 32  PTFVNLIHLELSFEREDYDKKWDPESSYGRWEWRWEWVLEGLEHCPKLQNLNILD----E 199
           P F NL +LEL+F+ +D             W  R  W++E L+H PKLQNL I +    +
Sbjct: 236 PMFQNLTYLELNFKDQD-------------WFLRGLWLIEVLKHSPKLQNLKIQECEHRQ 282

Query: 200 SYWIYEEWMEPQTVAECLSSQLRTFSLRSYNGTRNELKFVKYIMQNSKV 346
                  WM+P +V ECLS Q++T  +R Y GT+ E +F KYIMQ+S V
Sbjct: 283 GSRYKTIWMDPPSVPECLSRQIKTCCIRGYRGTKYEFEFAKYIMQHSNV 331


>ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497291|gb|AES78494.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 352

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = +2

Query: 23  YDHPTFVNLIHLELSFEREDYDKKWDPESSYGRWEWRWEWVLEGLEHCPKLQNLNILDES 202
           Y  PTF+NL +L++ F+            ++  W  +W+W+ E L HCPKLQNL I + S
Sbjct: 214 YQVPTFLNLTNLKIVFQ-----------VTHKYWPKKWKWLTEVLHHCPKLQNLTIHEGS 262

Query: 203 YW------IYEEWMEPQTVAECLSSQLRTFSLRSYNGTRNELKFVKYIMQNSKV 346
                   +Y   M+   V ECLSSQL+T SL+ Y G   + +F KYI++N+KV
Sbjct: 263 SDRNKIEDVYR--MDTPIVPECLSSQLKTCSLKGYRGVNCDFQFAKYILKNAKV 314


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