BLASTX nr result

ID: Glycyrrhiza23_contig00010950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010950
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547748.1| PREDICTED: mitochondrial import inner membra...   231   3e-58
ref|XP_003516788.1| PREDICTED: mitochondrial import inner membra...   231   3e-58
ref|XP_003556088.1| PREDICTED: mitochondrial import inner membra...   217   4e-54
ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   207   5e-51
ref|XP_002514217.1| mitochondrial import inner membrane transloc...   207   5e-51

>ref|XP_003547748.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  231 bits (588), Expect = 3e-58
 Identities = 122/205 (59%), Positives = 132/205 (64%)
 Frame = +3

Query: 87  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPKGNRFPGAAQAVRLNAP 266
           MGTPETSREPCPDRILDDI             FHFLKGL+NSPKG+RF GA QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 267 RIGGSFAVWGGLFSAFDCTLVYARQKEDPWNSIFSGAATGGLLSMRQGMAASARSAAFXX 446
           R+GGSFAVWGGLFSAFDCT+VYARQKEDPWNSI +GAATGG LSMRQG+ ASARSAAF  
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 447 XXXXXXXXXXXXXNKFLSAQQPLPVIAEEMXXXXXXDSAPXXXXXXXXXXXXXXXXXXXX 626
                        NKFLSAQQP+P+I +E          P                    
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDE-----PQPQPPQSSEQPWLGGWFGGGNREET 175

Query: 627 XXXXXXXXXILESFDAPPVPSFEYK 701
                    ILESFDAPPVP+FEYK
Sbjct: 176 AGSGGSETKILESFDAPPVPNFEYK 200


>ref|XP_003516788.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  231 bits (588), Expect = 3e-58
 Identities = 121/205 (59%), Positives = 134/205 (65%)
 Frame = +3

Query: 87  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPKGNRFPGAAQAVRLNAP 266
           MGTPETSREPCPDRILDDI             FHFLKGL+NSPKG+RF GA QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 267 RIGGSFAVWGGLFSAFDCTLVYARQKEDPWNSIFSGAATGGLLSMRQGMAASARSAAFXX 446
           R+GGSFAVWGGLFSAFDCT+VYARQKEDPWNSI +GAATGG LSMRQG+ ASARSAAF  
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 447 XXXXXXXXXXXXXNKFLSAQQPLPVIAEEMXXXXXXDSAPXXXXXXXXXXXXXXXXXXXX 626
                        NKFLSAQQP+P+I +E+      + +                     
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDELPPQSSTEQS-----WLGGWFGGGNKEETAT 175

Query: 627 XXXXXXXXXILESFDAPPVPSFEYK 701
                    ILESFDAPPVP+FEYK
Sbjct: 176 TAGSGSETKILESFDAPPVPNFEYK 200


>ref|XP_003556088.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 213

 Score =  217 bits (553), Expect = 4e-54
 Identities = 115/213 (53%), Positives = 130/213 (61%), Gaps = 8/213 (3%)
 Frame = +3

Query: 87  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPKGNRFPGAAQAVRLNAP 266
           MGTPETSREPCPDRILDDI             FHFLKGL+N+P+G R   A+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNAPRGARVVAASQAVRLNAP 60

Query: 267 RIGGSFAVWGGLFSAFDCTLVYARQKEDPWNSIFSGAATGGLLSMRQGMAASARSAAFXX 446
           R+GGSFAVWGGLFS+FDCT+VY RQKEDPWNSIF+GAATGG LSMRQG+ A+ARSAAF  
Sbjct: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLPAAARSAAFGG 120

Query: 447 XXXXXXXXXXXXXNKFLSAQQPLPVIAEEMXXXXXXDSAP--------XXXXXXXXXXXX 602
                        NKFLSAQQP+P+I +E          P                    
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIVDEPLPPNGLPGQPVASAPDAASQSSWLGGWFGD 180

Query: 603 XXXXXXXXXXXXXXXXXILESFDAPPVPSFEYK 701
                            +LESFDAPPVP+FEYK
Sbjct: 181 GKKDEAAAEATGGSETKVLESFDAPPVPNFEYK 213


>ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane
           translocase subunit Tim17-like [Cucumis sativus]
          Length = 211

 Score =  207 bits (526), Expect = 5e-51
 Identities = 110/211 (52%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
 Frame = +3

Query: 87  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPKGNRFPGAAQAVRLNAP 266
           MGTPETSREPCPDRILDDI             FHF+KGL+NSP+G R  G  QAVR+NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAP 60

Query: 267 RIGGSFAVWGGLFSAFDCTLVYARQKEDPWNSIFSGAATGGLLSMRQGMAASARSAAFXX 446
           R+GGSFAVWGGLFSAFDCT+VY RQKEDPWNSI +GAATGG L MRQG A++ARSA F  
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120

Query: 447 XXXXXXXXXXXXXNKFLSAQQPLPVIAEE------MXXXXXXDSAPXXXXXXXXXXXXXX 608
                        NK LS QQ +PV+ EE      +       S+               
Sbjct: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYSSSSSSDSGNGSWFGGWFGGG 180

Query: 609 XXXXXXXXXXXXXXXILESFDAPPVPSFEYK 701
                          ILESFDAPPVP+FE+K
Sbjct: 181 KKKESEVSSGGSETTILESFDAPPVPNFEFK 211


>ref|XP_002514217.1| mitochondrial import inner membrane translocase subunit tim17,
           putative [Ricinus communis] gi|223546673|gb|EEF48171.1|
           mitochondrial import inner membrane translocase subunit
           tim17, putative [Ricinus communis]
          Length = 216

 Score =  207 bits (526), Expect = 5e-51
 Identities = 111/216 (51%), Positives = 127/216 (58%), Gaps = 11/216 (5%)
 Frame = +3

Query: 87  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPKGNRFPGAAQAVRLNAP 266
           MGTPETSREPCPDRILDDI             FHF+KG++NSP G R  G  QAVR+NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGIYNSPTGARLIGGTQAVRMNAP 60

Query: 267 RIGGSFAVWGGLFSAFDCTLVYARQKEDPWNSIFSGAATGGLLSMRQGMAASARSAAFXX 446
           R+GGSFAVWGGLFSAFDCT+VYARQKEDPWNSIF+GAATGG LSMRQG+ ASAR+A F  
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIFAGAATGGFLSMRQGLGASARAALFGG 120

Query: 447 XXXXXXXXXXXXXNKFLSAQQPLPVIAEEM-----------XXXXXXDSAPXXXXXXXXX 593
                        NK +SAQQ +PV+ ++                   S+          
Sbjct: 121 ILLGLIEGAGIMLNKVMSAQQNMPVMIDDSAPAMAGLPSLPGQEPASTSSGSESGSSWFG 180

Query: 594 XXXXXXXXXXXXXXXXXXXXILESFDAPPVPSFEYK 701
                               ILESFDAPPVP+FEYK
Sbjct: 181 GWFGGGKTEEPITSKGGKTEILESFDAPPVPNFEYK 216


Top