BLASTX nr result

ID: Glycyrrhiza23_contig00010903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010903
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   235   2e-60
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   233   1e-59
ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   229   2e-58
ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...   219   1e-55
ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, AB...   213   1e-53

>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  235 bits (600), Expect = 2e-60
 Identities = 119/125 (95%), Positives = 124/125 (99%)
 Frame = +3

Query: 3   LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
           L+IPSGKI+ALVGGSGSGKSTVISL+ERFYEPLSGQILLDRNDIRELDLKWLR QIGLVN
Sbjct: 389 LDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVN 448

Query: 183 QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
           QEPALFATSIKENILYGKDDATL+ELKRAVKLSDAQSF+NNLPDRLETQVGERGIQLSGG
Sbjct: 449 QEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPDRLETQVGERGIQLSGG 508

Query: 363 QKQRI 377
           QKQRI
Sbjct: 509 QKQRI 513



 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/125 (61%), Positives = 100/125 (80%)
 Frame = +3

Query: 3    LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
            L +P+GK +ALVG SGSGKS+VISL+ RFY+P SG++L+D  DI  L+LK LR  IGLV 
Sbjct: 1025 LRVPAGKSVALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQ 1084

Query: 183  QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
            QEPALFATSI ENILYGK+ A+  E+  A KL++A +F++ LP+   T+VGERG+QLSGG
Sbjct: 1085 QEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGG 1144

Query: 363  QKQRI 377
            Q+QR+
Sbjct: 1145 QRQRV 1149


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  233 bits (594), Expect = 1e-59
 Identities = 117/125 (93%), Positives = 123/125 (98%)
 Frame = +3

Query: 3   LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
           L+IPSGKI+ALVGGSGSGKSTVISL+ERFYEP+SGQILLDRNDIRELDLKWLR QIGLVN
Sbjct: 389 LDIPSGKIIALVGGSGSGKSTVISLIERFYEPISGQILLDRNDIRELDLKWLRQQIGLVN 448

Query: 183 QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
           QEPALFATSIKENILYGKDDATL+ELKRAVKLSDAQ F+NNLPDRLETQVGERGIQLSGG
Sbjct: 449 QEPALFATSIKENILYGKDDATLEELKRAVKLSDAQPFINNLPDRLETQVGERGIQLSGG 508

Query: 363 QKQRI 377
           QKQRI
Sbjct: 509 QKQRI 513



 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/125 (61%), Positives = 100/125 (80%)
 Frame = +3

Query: 3    LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
            L +P+GK +ALVG SGSGKS+VISL+ RFY+P SG++L+D  DI  L+LK LR  IGLV 
Sbjct: 1025 LRVPAGKSVALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQ 1084

Query: 183  QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
            QEPALFATSI ENILYGK+ A+  E+  A KL++A +F++ LP+   T+VGERG+QLSGG
Sbjct: 1085 QEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGG 1144

Query: 363  QKQRI 377
            Q+QR+
Sbjct: 1145 QRQRV 1149


>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
           gi|355514185|gb|AES95808.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1234

 Score =  229 bits (584), Expect = 2e-58
 Identities = 113/125 (90%), Positives = 124/125 (99%)
 Frame = +3

Query: 3   LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
           L+IP+GKI+ALVGGSGSGKSTV+SL+ERFYEP+SGQILLD+NDIRELDLKWLR QIGLVN
Sbjct: 379 LDIPAGKIVALVGGSGSGKSTVVSLIERFYEPISGQILLDKNDIRELDLKWLRQQIGLVN 438

Query: 183 QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
           QEPALFATSIKENILYGKDDATL+ELKRAVKLSDAQSF+NNLP+RL+TQVGERGIQLSGG
Sbjct: 439 QEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPERLDTQVGERGIQLSGG 498

Query: 363 QKQRI 377
           QKQRI
Sbjct: 499 QKQRI 503



 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/125 (61%), Positives = 100/125 (80%)
 Frame = +3

Query: 3    LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
            L +PSGK +ALVG SGSGKS+VISL+ RFY+P SG++L+D  DI  ++LK LR  IGLV 
Sbjct: 1012 LRVPSGKSVALVGQSGSGKSSVISLILRFYDPTSGKVLIDGKDITRINLKSLRKHIGLVQ 1071

Query: 183  QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
            QEPALFATSI ENILYGK+ A+  E+  A KL++A +F++ LP+   T+VGERG+QLSGG
Sbjct: 1072 QEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISALPEGYSTKVGERGVQLSGG 1131

Query: 363  QKQRI 377
            Q+QR+
Sbjct: 1132 QRQRV 1136


>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score =  219 bits (559), Expect = 1e-55
 Identities = 111/125 (88%), Positives = 120/125 (96%)
 Frame = +3

Query: 3   LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
           +EIPSGKILALVGGSGSGKSTVISL+ERFYEPLSGQILLD N+IRELDLKWLR QIGLVN
Sbjct: 384 IEIPSGKILALVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVN 443

Query: 183 QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
           QEPALFATSI+ENILYGKDDATL+E+ +AV LSDAQSF+NNLPD L+TQVGERGIQLSGG
Sbjct: 444 QEPALFATSIRENILYGKDDATLEEVNQAVILSDAQSFINNLPDGLDTQVGERGIQLSGG 503

Query: 363 QKQRI 377
           QKQRI
Sbjct: 504 QKQRI 508



 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/125 (60%), Positives = 101/125 (80%)
 Frame = +3

Query: 3    LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
            L++ +GK +ALVG SG GKS+VISL+ RFY+P SG++++D  DI++L+LK LR  IGLV 
Sbjct: 1022 LKVLAGKNIALVGHSGCGKSSVISLILRFYDPTSGKVMIDGKDIKKLNLKSLRKHIGLVQ 1081

Query: 183  QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
            QEPALFATSI ENILYGK+ A+  E+  A KL++A SF++ LP+   T+VGERG+QLSGG
Sbjct: 1082 QEPALFATSIYENILYGKEGASEAEVIEAAKLANAHSFISALPEGYATKVGERGVQLSGG 1141

Query: 363  QKQRI 377
            QKQR+
Sbjct: 1142 QKQRV 1146


>ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222841778|gb|EEE79325.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1250

 Score =  213 bits (543), Expect = 1e-53
 Identities = 106/125 (84%), Positives = 117/125 (93%)
 Frame = +3

Query: 3   LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
           L+IPSGKI+ALVGGSGSGKSTVISL+ERFY+PL G+ILLD NDIR+LDLKWLR QIGLVN
Sbjct: 391 LDIPSGKIVALVGGSGSGKSTVISLIERFYDPLFGKILLDGNDIRDLDLKWLRQQIGLVN 450

Query: 183 QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
           QEPALFATSI+ENILYGKDDATL+E+ RA KLS A SF+NNLPD+ ETQVGERGIQLSGG
Sbjct: 451 QEPALFATSIRENILYGKDDATLEEITRAAKLSGAMSFINNLPDKFETQVGERGIQLSGG 510

Query: 363 QKQRI 377
           QKQRI
Sbjct: 511 QKQRI 515



 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/125 (60%), Positives = 101/125 (80%)
 Frame = +3

Query: 3    LEIPSGKILALVGGSGSGKSTVISLMERFYEPLSGQILLDRNDIRELDLKWLRHQIGLVN 182
            L + SGK +ALVG SGSGKS+V+SL+ RFY+P +G++++D  DI+EL +K LR  IGLV 
Sbjct: 1026 LRVRSGKSMALVGQSGSGKSSVLSLILRFYDPTAGKVMIDGIDIKELKVKSLRKHIGLVQ 1085

Query: 183  QEPALFATSIKENILYGKDDATLQELKRAVKLSDAQSFVNNLPDRLETQVGERGIQLSGG 362
            QEPALFATSI ENILYGK+ A+  E+  A KL++A SF+++LP+   T+VGERG+QLSGG
Sbjct: 1086 QEPALFATSIYENILYGKEGASEAEVIEAAKLANAHSFISSLPEGYSTKVGERGVQLSGG 1145

Query: 363  QKQRI 377
            QKQR+
Sbjct: 1146 QKQRV 1150


Top