BLASTX nr result

ID: Glycyrrhiza23_contig00010894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010894
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44262.1| unknown [Medicago truncatula]                           58   9e-07
gb|ACJ85016.1| unknown [Medicago truncatula]                           58   9e-07
ref|XP_003555930.1| PREDICTED: sec-independent protein transloca...    55   8e-06

>gb|AFK44262.1| unknown [Medicago truncatula]
          Length = 343

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/74 (45%), Positives = 39/74 (52%)
 Frame = -3

Query: 224 PMNIVPKFGLLRNHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVCFAVDDDLRQKQ 45
           PMNI+P+FGLLR HL                               FVCFAVDD+LRQ Q
Sbjct: 9   PMNILPQFGLLRTHLTPIRVNNSSGFTFPLSRRRNRSFGK------FVCFAVDDELRQNQ 62

Query: 44  QQLNTSSTGLGSAI 3
           QQL+TSS  +GSAI
Sbjct: 63  QQLSTSSNRVGSAI 76


>gb|ACJ85016.1| unknown [Medicago truncatula]
          Length = 343

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/74 (45%), Positives = 39/74 (52%)
 Frame = -3

Query: 224 PMNIVPKFGLLRNHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVCFAVDDDLRQKQ 45
           PMNI+P+FGLLR HL                               FVCFAVDD+LRQ Q
Sbjct: 9   PMNILPQFGLLRTHLTPIRVNNSSGFTFPLSRRRNRSFGK------FVCFAVDDELRQNQ 62

Query: 44  QQLNTSSTGLGSAI 3
           QQL+TSS  +GSAI
Sbjct: 63  QQLSTSSNRVGSAI 76


>ref|XP_003555930.1| PREDICTED: sec-independent protein translocase protein TatC-like
           [Glycine max]
          Length = 344

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = -3

Query: 224 PMNIVPKFGLLRNHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFVCFAVDDDLRQKQ 45
           PMNIVP+FG LR  +                               FVCFAVDD+LRQKQ
Sbjct: 9   PMNIVPQFGSLRTPIRVGNPSGLSFLRKRNNG--------------FVCFAVDDELRQKQ 54

Query: 44  QQLNTSSTGLGSAI 3
           Q L+T++TGLGSA+
Sbjct: 55  QDLSTTATGLGSAL 68


Top