BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010892
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   618   e-174
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   608   e-172
ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-li...   603   e-170
gb|AFK40832.1| unknown [Lotus japonicus]                              600   e-169
ref|XP_003526648.1| PREDICTED: replication factor C subunit 4-li...   582   e-163

>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
            gi|357520353|ref|XP_003630465.1| Replication factor C
            subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
            unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
            Replication factor C subunit [Medicago truncatula]
            gi|355524487|gb|AET04941.1| Replication factor C subunit
            [Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
            [Medicago truncatula]
          Length = 339

 Score =  618 bits (1594), Expect = e-174
 Identities = 309/338 (91%), Positives = 322/338 (95%)
 Frame = +2

Query: 110  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 289
            MAPI+QS+QPWVEKYRPKQVKDVAHQ+EVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 290  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIV 469
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTN+ K GYPCPPYKIIV
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120

Query: 470  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 649
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+EEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 650  SRILYICKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVV 829
            SRI+YICKEEG+YLDAEGLSTLS+ISQGDLRRAITYLQSAARLFG            G+V
Sbjct: 181  SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV 240

Query: 830  PEKVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 1009
            P +VVEALLKAC+SGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS
Sbjct: 241  PAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 300

Query: 1010 KKLGEADKCLVDGADEYLQLLDVISNTMQALCNMPERF 1123
            KKLGEADKCLVDGADEYLQLLDV+SNT+QALCNMPE F
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPEGF 338


>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
            max]
          Length = 342

 Score =  608 bits (1569), Expect = e-172
 Identities = 307/340 (90%), Positives = 317/340 (93%)
 Frame = +2

Query: 110  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 289
            MAPILQS+QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 290  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIV 469
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRK+GYPCPP+KIIV
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIV 120

Query: 470  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 649
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 650  SRILYICKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVV 829
            SRILYI +EEGL LDAE LSTLSSIS GDLRRAITYLQSAARLFG            GVV
Sbjct: 181  SRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 240

Query: 830  PEKVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 1009
            P KVVE LLKACKSGNFDLANKEVNNFIAEGYP SQMLTQLFE+IVE+ND+SDEQKARIS
Sbjct: 241  PAKVVEELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARIS 300

Query: 1010 KKLGEADKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 1129
            KKLGEADKCLVDGADEYLQLLDV+SNTM+A  NMPE F Y
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 340


>ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
            max]
          Length = 342

 Score =  603 bits (1554), Expect = e-170
 Identities = 306/340 (90%), Positives = 315/340 (92%)
 Frame = +2

Query: 110  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 289
            MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 290  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIV 469
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQ K GYPCPP+KIIV
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV 120

Query: 470  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 649
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 650  SRILYICKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVV 829
            SRILYI +EEGL LDAE LSTLS IS GDLRRAITYLQSAARLFG            GVV
Sbjct: 181  SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 240

Query: 830  PEKVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 1009
            P KVVEALLKACKSGNFDLANKEVNNFIAEGYP SQMLTQLFEAIVEEND+SDEQKARIS
Sbjct: 241  PAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARIS 300

Query: 1010 KKLGEADKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 1129
            KKLGEADKCLVDGADEYLQLLDV+SNT++A  ++PE F Y
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAY 340


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  600 bits (1547), Expect = e-169
 Identities = 303/340 (89%), Positives = 314/340 (92%)
 Frame = +2

Query: 110  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 289
            MAPI+QSSQPWVEKYRPKQVKDVA+QDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 290  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIV 469
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTN +K GYPCPPYKIIV
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIV 120

Query: 470  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 649
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 650  SRILYICKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVV 829
            SRILYIC EEGL+LDAEGLSTLSSISQGDLRRAITYLQS+ARLFG            GVV
Sbjct: 181  SRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVV 240

Query: 830  PEKVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 1009
            PE VVEA+LKACKSGNFDLANKEVNNFIAEGYP SQ+LTQLF+AIVEE   SD+QKARI 
Sbjct: 241  PENVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARIC 300

Query: 1010 KKLGEADKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 1129
            KKLGEADKCLVDGADEYLQLLDVISNT +A C+MPE   Y
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSY 340


>ref|XP_003526648.1| PREDICTED: replication factor C subunit 4-like isoform 3 [Glycine
            max]
          Length = 335

 Score =  582 bits (1499), Expect = e-163
 Identities = 299/340 (87%), Positives = 308/340 (90%)
 Frame = +2

Query: 110  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 289
            MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 290  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIV 469
            AIAHQLFG       VLELNASDDRGINVVRTKIKDFAAVAVGTNQ K GYPCPP+KIIV
Sbjct: 61   AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV 113

Query: 470  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 649
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 114  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 173

Query: 650  SRILYICKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVV 829
            SRILYI +EEGL LDAE LSTLS IS GDLRRAITYLQSAARLFG            GVV
Sbjct: 174  SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 233

Query: 830  PEKVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 1009
            P KVVEALLKACKSGNFDLANKEVNNFIAEGYP SQMLTQLFEAIVEEND+SDEQKARIS
Sbjct: 234  PAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARIS 293

Query: 1010 KKLGEADKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 1129
            KKLGEADKCLVDGADEYLQLLDV+SNT++A  ++PE F Y
Sbjct: 294  KKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAY 333