BLASTX nr result

ID: Glycyrrhiza23_contig00010884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010884
         (1759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   665   0.0  
ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g...   650   0.0  
ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatul...   631   e-178
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...   605   e-170
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   603   e-170

>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  665 bits (1715), Expect = 0.0
 Identities = 360/474 (75%), Positives = 386/474 (81%), Gaps = 1/474 (0%)
 Frame = -3

Query: 1694 MATVEPTQNGTVTASNPLLPENFSDXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXX 1515
            MAT EP QNGT   + PLLP+N S                                    
Sbjct: 1    MATAEPLQNGT---AEPLLPDNVS--------------------------AAQPPTETES 31

Query: 1514 XXXXXXXXXXEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRARIRVLDGA 1335
                      EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETR+RIRVLD  
Sbjct: 32   NAAAAASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAP 91

Query: 1334 VGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSETDSEIKGSA-GVTFCSIRLLV 1158
            +GTPDR+VL+SGKEEPEAALSPAMDAV+R+FKRVSGLSETD+E K SA G+ FCSIRLLV
Sbjct: 92   LGTPDRIVLVSGKEEPEAALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLV 151

Query: 1157 ASTQAINLIGKQGSLIRSIQESTGASVRVLSGDEVKFYAATDERIVELQGEALKVLKALE 978
            ASTQAINLIGKQGSLI+SIQE+T ASVRVLSGDEV+ YA  DERIVE+QGEALKVLKALE
Sbjct: 152  ASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALE 211

Query: 977  AVVGHLRKFLVDHSVLPLFEKSYNAPAPHERQAETWSDKSSLHTNPQIPQTSIFADIPLS 798
            AVVGHLRKFLVDHSVLPLFEK+YNA    +RQAETWSDKS LHT  +   TSIFADIP S
Sbjct: 212  AVVGHLRKFLVDHSVLPLFEKTYNASTSQDRQAETWSDKSLLHTTSR---TSIFADIPYS 268

Query: 797  TKRDSVYADRETQLDSLLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVVQTMQIPLS 618
            TKRDSV ADRE+QLDS LPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTV+QTMQIPLS
Sbjct: 269  TKRDSVLADRESQLDSFLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVIQTMQIPLS 328

Query: 617  YAEDIIGIQGTNIEYIRRTSGAILTVQESRTPDEIIVEIKGTSSQVQMAQQLIQEVISNQ 438
            YAEDIIGIQGTNIEYIRRTSGAILTVQESR PDEI+VEIKGTSS+VQ AQQLIQ+VIS+ 
Sbjct: 329  YAEDIIGIQGTNIEYIRRTSGAILTVQESRVPDEIVVEIKGTSSEVQTAQQLIQDVISSH 388

Query: 437  KEPATNSYGRLDAGLRSSYSQLGNTSRISSSLPSQQPYTAYGSSGLGDYSTFRL 276
            KEP T+SYGRLDAG RSSYSQLG TSR+  S  S QPYT YG+SGLGDYSTFRL
Sbjct: 389  KEPITSSYGRLDAGPRSSYSQLGTTSRLPPSSLSSQPYTGYGASGLGDYSTFRL 442


>ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  650 bits (1678), Expect = 0.0
 Identities = 338/403 (83%), Positives = 366/403 (90%), Gaps = 1/403 (0%)
 Frame = -3

Query: 1481 KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRVVLIS 1302
            KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETR+RIRVLD  +GTPDR+VL+S
Sbjct: 44   KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVS 103

Query: 1301 GKEEPEAALSPAMDAVIRVFKRVSGLSETDSEIKGSA-GVTFCSIRLLVASTQAINLIGK 1125
            GKE+PEAALSPAMDAV+R+FKRVSG SETD+E + SA G+ F SIRLLVASTQAINLIGK
Sbjct: 104  GKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGK 163

Query: 1124 QGSLIRSIQESTGASVRVLSGDEVKFYAATDERIVELQGEALKVLKALEAVVGHLRKFLV 945
            QGSLI+SIQE+T ASVRVLSGDEV+FYA  +ERIVE+QGEALKVLKALEAVVGHLRKFLV
Sbjct: 164  QGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLV 223

Query: 944  DHSVLPLFEKSYNAPAPHERQAETWSDKSSLHTNPQIPQTSIFADIPLSTKRDSVYADRE 765
            DHSVLPLFEK+YNAP   +RQAETWSDKS LHT+ +   TSIFADIPLSTKRDSV ADRE
Sbjct: 224  DHSVLPLFEKTYNAPTSQDRQAETWSDKSLLHTSSR---TSIFADIPLSTKRDSVLADRE 280

Query: 764  TQLDSLLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVVQTMQIPLSYAEDIIGIQGT 585
            +QLD  LPSSTMSLYGQDSSLSGV SSALGRVGAPIVTTV+QTMQIPLSYAEDIIGIQGT
Sbjct: 281  SQLDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGT 340

Query: 584  NIEYIRRTSGAILTVQESRTPDEIIVEIKGTSSQVQMAQQLIQEVISNQKEPATNSYGRL 405
            NIEYIRRTSGAILTVQESR PDEI+VEIKGTSS+VQ AQQLIQ+VIS+ KEP T+SYGRL
Sbjct: 341  NIEYIRRTSGAILTVQESRVPDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPVTSSYGRL 400

Query: 404  DAGLRSSYSQLGNTSRISSSLPSQQPYTAYGSSGLGDYSTFRL 276
            DA  RSSYS LG TSR+  S  S QPYT YG+SGLGDYSTFRL
Sbjct: 401  DAVPRSSYSHLGTTSRLPPSSLSSQPYTGYGASGLGDYSTFRL 443


>ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
            gi|355484123|gb|AES65326.1| Poly(rC)-binding protein
            [Medicago truncatula]
          Length = 470

 Score =  631 bits (1627), Expect = e-178
 Identities = 326/413 (78%), Positives = 365/413 (88%), Gaps = 11/413 (2%)
 Frame = -3

Query: 1481 KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRVVLIS 1302
            +RWPGWPGDCVFRLIVPVGKVG IIGRKG+LIKK+C+ET+AR+RVLD  +G PDR++LIS
Sbjct: 61   QRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILIS 120

Query: 1301 GKEEPEAALSPAMDAVIRVFKRVSGLSETDSEIKGSAGVTFCSIRLLVASTQAINLIGKQ 1122
            GKEE EAA+SPAMDAVIR+FKRVSGLSETDSE KG AGVT CSIRLLVASTQAI+LIGKQ
Sbjct: 121  GKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQ 180

Query: 1121 GSLIRSIQESTGASVRVLSGDEVKFYAATDERIVELQGEALKVLKALEAVVGHLRKFLVD 942
            G++IRSIQES+GASVRVLSGDEV+++A  +ERIV+LQGEAL VLKALEAV+GHLRKFLVD
Sbjct: 181  GTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVD 240

Query: 941  HSVLPLFEKSYNAPAP-HERQAETWSDKSSLHTNPQIPQTSIFADIPLSTKRDSVYADRE 765
            HS+LP++EK+YNA  P  +RQAETWSDK  LHT     QTS+F+DIP  TKRDSV+ADRE
Sbjct: 241  HSILPVYEKTYNASLPQQDRQAETWSDKPLLHTT---SQTSMFSDIPFPTKRDSVFADRE 297

Query: 764  TQLDSLLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVVQTMQIPLSYAEDIIGIQGT 585
            + LDSLL SSTMSLYGQDSSLSGVRSS+L RVGAPIVTTV+QTMQIPLSYAEDIIGIQGT
Sbjct: 298  SHLDSLLSSSTMSLYGQDSSLSGVRSSSLSRVGAPIVTTVIQTMQIPLSYAEDIIGIQGT 357

Query: 584  NIEYIRRTSGAILTVQESRTPDEIIVEIKGTSSQVQMAQQLIQEVISNQKEPATNSYGRL 405
            NI+YIRRTSGAILTVQESR PDEI+VEIKGT+SQVQ AQQLIQEVIS+ +EP TNSYGRL
Sbjct: 358  NIDYIRRTSGAILTVQESRVPDEIVVEIKGTTSQVQTAQQLIQEVISSHREPVTNSYGRL 417

Query: 404  DAG----------LRSSYSQLGNTSRISSSLPSQQPYTAYGSSGLGDYSTFRL 276
            DAG           +SSYSQLGNTSRI  S  S QPYT YG+SGLGDYSTFRL
Sbjct: 418  DAGRMDVGLRSLYSQSSYSQLGNTSRIPPSSLSSQPYTGYGASGLGDYSTFRL 470


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  605 bits (1559), Expect = e-170
 Identities = 328/404 (81%), Positives = 351/404 (86%), Gaps = 2/404 (0%)
 Frame = -3

Query: 1481 KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRVVLIS 1302
            KRWPGWPG CVFRLIVPV KVGSIIGRKGELIKK CEET+ARIRVLDGAVGT DR+VLIS
Sbjct: 37   KRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLIS 96

Query: 1301 GKEEPEAALSPAMDAVIRVFKRVSGLSETDSEIKGSAGVTFCSIRLLVASTQAINLIGKQ 1122
            GKE+ EA LSPAMDAVIRVFKRVSG SE D++ K SA V FCS+RLLVASTQAINLIGKQ
Sbjct: 97   GKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASA-VAFCSVRLLVASTQAINLIGKQ 155

Query: 1121 GSLIRSIQESTGASVRVLSGDEVKFYAATDERIVELQGEALKVLKALEAVVGHLRKFLVD 942
            GSLI+SIQE+TGASVRVLSGDEV FYAA DERIVELQGEA+KVLKALEAVVGHLRKFLVD
Sbjct: 156  GSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD 215

Query: 941  HSVLPLFEKSYNAPAPHERQAET-WSDKSSLHTNPQIPQTSIFADIPLSTKRDSVYADRE 765
            +SVLPLFEK+YNA    ERQA+T W DK SLH+     Q SI  DIPLSTKRDS++ADRE
Sbjct: 216  NSVLPLFEKTYNATISQERQADTTWVDKPSLHS---ASQPSIVTDIPLSTKRDSLFADRE 272

Query: 764  TQLDSLLPSSTMSLYGQDSSLSGVRSSALGRVGAP-IVTTVVQTMQIPLSYAEDIIGIQG 588
            +QLDSLLP STMS+YGQDSSLSG+RSSAL R  AP IVTTV+QTMQIPLSYAEDIIGIQG
Sbjct: 273  SQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQG 332

Query: 587  TNIEYIRRTSGAILTVQESRTPDEIIVEIKGTSSQVQMAQQLIQEVISNQKEPATNSYGR 408
            TNIEYIRRTSGAILTVQESR PDEIIVEIKGTSSQVQ AQQLIQEVISN  EP  ++Y R
Sbjct: 333  TNIEYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQTAQQLIQEVISNHTEPVASNYSR 392

Query: 407  LDAGLRSSYSQLGNTSRISSSLPSQQPYTAYGSSGLGDYSTFRL 276
            LD GLRSSY QLG++S  SSSL SQ     YGSS LG YSTFRL
Sbjct: 393  LDTGLRSSYPQLGSSSYSSSSLSSQPYSGGYGSSALGGYSTFRL 436


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  603 bits (1555), Expect = e-170
 Identities = 327/404 (80%), Positives = 350/404 (86%), Gaps = 2/404 (0%)
 Frame = -3

Query: 1481 KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRVVLIS 1302
            KRWPGWPG CVFRLIVPV KVGSIIGRKGELIKK CEET+ARIRVLDGAVGT DR+VLIS
Sbjct: 37   KRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLIS 96

Query: 1301 GKEEPEAALSPAMDAVIRVFKRVSGLSETDSEIKGSAGVTFCSIRLLVASTQAINLIGKQ 1122
            GKEEPEA LSPAM+AVIRVFKRVSG SE D+E K SA V FCS+RLLVASTQAINLIGKQ
Sbjct: 97   GKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASA-VAFCSVRLLVASTQAINLIGKQ 155

Query: 1121 GSLIRSIQESTGASVRVLSGDEVKFYAATDERIVELQGEALKVLKALEAVVGHLRKFLVD 942
            GSLI+SIQE+TGASVRVLSGDEV FYAA DERIVELQGEA+KVLKALEAVVGHLRKFLVD
Sbjct: 156  GSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD 215

Query: 941  HSVLPLFEKSYNAPAPHERQAET-WSDKSSLHTNPQIPQTSIFADIPLSTKRDSVYADRE 765
            +SVLPLFEK+YNA    E QA+T W DK SLH+     Q SI  D+PLSTKRDS++ADRE
Sbjct: 216  NSVLPLFEKTYNATISQEHQADTTWVDKPSLHS---ASQPSIVTDLPLSTKRDSLFADRE 272

Query: 764  TQLDSLLPSSTMSLYGQDSSLSGVRSSALGRVGAP-IVTTVVQTMQIPLSYAEDIIGIQG 588
            +QLDSLLP STMS+YGQDSSLSG+RSSAL R  AP IVTTV+QTMQIPLSYAEDIIGIQG
Sbjct: 273  SQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQG 332

Query: 587  TNIEYIRRTSGAILTVQESRTPDEIIVEIKGTSSQVQMAQQLIQEVISNQKEPATNSYGR 408
            TNIEYIR TSGAILTVQES  PDEIIVEIKGTSSQVQ AQQLIQEVISN KEP  ++Y R
Sbjct: 333  TNIEYIRCTSGAILTVQESPVPDEIIVEIKGTSSQVQTAQQLIQEVISNHKEPLASNYSR 392

Query: 407  LDAGLRSSYSQLGNTSRISSSLPSQQPYTAYGSSGLGDYSTFRL 276
            LD GLRSSY QLG++S  SSSL SQ     YGSSGLG Y TFRL
Sbjct: 393  LDTGLRSSYPQLGSSSYSSSSLSSQPYSGGYGSSGLGGYRTFRL 436


Top