BLASTX nr result

ID: Glycyrrhiza23_contig00010833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010833
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41212.1| unknown [Medicago truncatula]                           93   2e-17
ref|XP_002302060.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002306831.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002521018.1| nucleic acid binding protein, putative [Rici...    83   3e-14
ref|XP_004149183.1| PREDICTED: uncharacterized protein LOC101219...    78   9e-13

>gb|AFK41212.1| unknown [Medicago truncatula]
          Length = 191

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 69/183 (37%), Positives = 93/183 (50%), Gaps = 29/183 (15%)
 Frame = -1

Query: 467 SKSSSDDEIDTGLS-------------GRSYECIFCKRGFSTAQALGGHMNIHRKDKARN 327
           SKSSSD+ ID                 GRSYEC+FCKRGF+TAQALGGHMNIHRKD+A N
Sbjct: 10  SKSSSDENIDRSSDQNNDDDHDHHMGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANN 69

Query: 326 -----KPTFPLSTSSEIPLSQYYPFSPVGXXXXXXXXXXXTIPEGADHA----------I 192
                K  F   +SS++ +         G            +  G  ++          +
Sbjct: 70  NKSATKTNFAPPSSSKLVVDH----DNYGDLGFYSTINPSHLARGGYYSSISSTTTTPEV 125

Query: 191 TNNHHHQVYFPATASHVLQYNEVLCVEKQQDHWRQQRNLSYPFCVVGKIKDKFEDKDG-L 15
            + ++HQ+YFP   SHV QY+E+LCVE Q+   +  R LS     + K K +  ++ G L
Sbjct: 126 DSLNYHQIYFP---SHV-QYSEMLCVENQRMFGQDWRGLSLYTNPLNKDKIENNNEVGEL 181

Query: 14  DLE 6
           DLE
Sbjct: 182 DLE 184


>ref|XP_002302060.1| predicted protein [Populus trichocarpa] gi|222843786|gb|EEE81333.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 69/187 (36%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
 Frame = -1

Query: 473 EYSKSSSDDEI-------DTGLSGRSYECIFCKRGFSTAQALGGHMNIHRKDKARNKPTF 315
           E SKSSSD+E        DTG +GRSYEC+FCKRGF+TAQALGGHMNIHRKD+A+++P+ 
Sbjct: 8   EDSKSSSDEEEITDRSDQDTG-TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSRPSS 66

Query: 314 PLSTSSEI-----------PLSQYYPFSPVGXXXXXXXXXXXTIPEGADHAITNNHHHQV 168
             S SS++           P+  Y P  P                    H +  N  +Q 
Sbjct: 67  VPSLSSKVDEDYASFQGYPPIQSYPPHYP------------------TPHEVHIN--YQT 106

Query: 167 YFPATAS------HVLQYNEVLCVEKQQ------DHWRQQRNL-SYPFCVVGKIKDKFED 27
           +FPA+ +      +  Q+N    V+         D WR+  +L + P  V    K+K ED
Sbjct: 107 FFPASTTWGIGSPYAQQHNGDFYVQSPHHLYPFGDDWRRSLSLQTGPSHVDDNTKEKIED 166

Query: 26  KDGLDLE 6
             G D E
Sbjct: 167 GIGADDE 173


>ref|XP_002306831.1| predicted protein [Populus trichocarpa] gi|222856280|gb|EEE93827.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 24/180 (13%)
 Frame = -1

Query: 473 EYSKSSSDDEI------DTGLSGRSYECIFCKRGFSTAQALGGHMNIHRKDKARNKPTFP 312
           E SKSSSD+EI      DTG +GRSYEC+FCKRGF+TAQALGGHMNIHRKD+A+++P+  
Sbjct: 9   EDSKSSSDEEITDRSYQDTG-TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSRPSSV 67

Query: 311 LSTSSEI-----------PLSQYYPFSPVGXXXXXXXXXXXTIPE----GADHAITNNHH 177
            S SS++           PL  Y    P              +      G+ +A     H
Sbjct: 68  PSFSSKVDEDFPSFRGYPPLQSYPAHYPTPHEVHTNYQTFFPLSSTWGIGSPYA---QQH 124

Query: 176 HQVYFPATASHVLQYNEVLC---VEKQQDHWRQQRNLSYPFCVVGKIKDKFEDKDGLDLE 6
           +  ++  T  H+  + E +C   + +Q D      N         KI++  E  D LDLE
Sbjct: 125 NGDFYAQTPQHLYPFGEDICRGSLSQQIDPSHVDDNTK------EKIEEGSEADDDLDLE 178


>ref|XP_002521018.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223539855|gb|EEF41435.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 188

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 65/181 (35%), Positives = 89/181 (49%), Gaps = 27/181 (14%)
 Frame = -1

Query: 467 SKSSSDDEIDTGL--------SGRSYECIFCKRGFSTAQALGGHMNIHRKDKARNKPTFP 312
           +KSSS++E D           +GRSYEC+FCKRGF+TAQALGGHMNIHRKD+A  KP+  
Sbjct: 11  NKSSSEEETDRSEKANDHDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA--KPSLA 68

Query: 311 LSTSSEIPLSQYYPFSPVGXXXXXXXXXXXTIPEGADHAITNNHHHQV------YFPATA 150
            S+S    + + Y  S  G                  +  T NHHH+V      +FP ++
Sbjct: 69  SSSSISSKVDEDYYASLRGYTPIQSFP--------PHYYSTANHHHEVHTNYQTFFPPSS 120

Query: 149 SHVLQ--YNEVLCVEKQQ------DHWRQQRNLSYPFCVVGKIKDKFEDKDG-----LDL 9
               +    + L V+  Q      D WR+  +L      V    +K ++KDG     LDL
Sbjct: 121 GGSFRPPNGDGLYVQSPQILNPFEDDWRRSLSLQIGPSHVDDDHNKQKEKDGSVADELDL 180

Query: 8   E 6
           E
Sbjct: 181 E 181


>ref|XP_004149183.1| PREDICTED: uncharacterized protein LOC101219031 [Cucumis sativus]
          Length = 202

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/47 (72%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
 Frame = -1

Query: 449 DEIDTGL-SGRSYECIFCKRGFSTAQALGGHMNIHRKDKARNKPTFP 312
           D+I+  + SGRSYEC+FCKRGF+TAQALGGHMNIHRKD+ +NKP  P
Sbjct: 32  DQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKNKPNTP 78


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