BLASTX nr result

ID: Glycyrrhiza23_contig00010745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010745
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycin...   385   e-105
ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycin...   382   e-104
gb|AFK41044.1| unknown [Lotus japonicus]                              373   e-101
gb|AFK40378.1| unknown [Medicago truncatula]                          357   3e-96
ref|XP_003602287.1| RNA-binding protein with multiple splicing [...   348   5e-94

>ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
           gi|255640386|gb|ACU20480.1| unknown [Glycine max]
          Length = 230

 Score =  385 bits (990), Expect = e-105
 Identities = 186/211 (88%), Positives = 200/211 (94%)
 Frame = +2

Query: 5   AGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDTESLDASYERYLRSAQVSSYGVGQS 184
           AGKRSRSDYDVSG HDLPSYFPHDDDRGGL+VIRDTESLDASYERYLRSAQVSSYG GQS
Sbjct: 20  AGKRSRSDYDVSGVHDLPSYFPHDDDRGGLRVIRDTESLDASYERYLRSAQVSSYGSGQS 79

Query: 185 TRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILGLSGGRSDHSLPPDATNTLFVEGLP 364
           TRT+ GR+P+ + DDSH+A+ GGVDR TNAKD++ GLS GR+DHSLPPDAT+TLFVEGLP
Sbjct: 80  TRTIDGRIPNRAIDDSHVANIGGVDRGTNAKDKMPGLSSGRADHSLPPDATSTLFVEGLP 139

Query: 365 SNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDPLVLCFVDFVSPAHAATAMDALQGYK 544
           SNCTRREVAHIFRPFVGY+EVRLVSKESRQPGGDPLVLCFVDF+SPAHAATAM+ALQGYK
Sbjct: 140 SNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFMSPAHAATAMEALQGYK 199

Query: 545 FDELDRNSVNLRFQFARYPGARSGGGFRGKR 637
           FDELDRNSVNLRFQFARYPGARSGG  RGKR
Sbjct: 200 FDELDRNSVNLRFQFARYPGARSGGVHRGKR 230


>ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
           gi|255644702|gb|ACU22853.1| unknown [Glycine max]
          Length = 230

 Score =  382 bits (981), Expect = e-104
 Identities = 183/211 (86%), Positives = 198/211 (93%)
 Frame = +2

Query: 5   AGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDTESLDASYERYLRSAQVSSYGVGQS 184
           AGKRSRSDYDVSG HDLP YFPHDDDRGGL+VIRDTESLDASYERYLRSAQVSSYG GQS
Sbjct: 20  AGKRSRSDYDVSGVHDLPGYFPHDDDRGGLRVIRDTESLDASYERYLRSAQVSSYGSGQS 79

Query: 185 TRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILGLSGGRSDHSLPPDATNTLFVEGLP 364
           TRT+ GR+P+ + DDSH+A+ GG+DR TNAKD++LGLS GR+DHSLPPDAT+TLFVEGLP
Sbjct: 80  TRTISGRIPNRAIDDSHVANIGGIDRGTNAKDKMLGLSSGRTDHSLPPDATSTLFVEGLP 139

Query: 365 SNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDPLVLCFVDFVSPAHAATAMDALQGYK 544
            NCTRREVAHIF PFVGY+EVRLVSKESRQPGGDPLVLCFVDF+SPAHAATAM+ALQGYK
Sbjct: 140 PNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDPLVLCFVDFLSPAHAATAMEALQGYK 199

Query: 545 FDELDRNSVNLRFQFARYPGARSGGGFRGKR 637
           FDELDRNSVNLRFQFARYPGARSGG  RGKR
Sbjct: 200 FDELDRNSVNLRFQFARYPGARSGGVHRGKR 230


>gb|AFK41044.1| unknown [Lotus japonicus]
          Length = 232

 Score =  373 bits (958), Expect = e-101
 Identities = 181/213 (84%), Positives = 196/213 (92%), Gaps = 2/213 (0%)
 Frame = +2

Query: 5   AGKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDTESLDASYERYLRSAQVSSYGVGQS 184
           A KR+RSDYDVSG HD+P Y+PHDDDRGGL+VIRDTESLDASYERYLRSAQVSS+G GQS
Sbjct: 20  AAKRARSDYDVSGVHDMPGYYPHDDDRGGLRVIRDTESLDASYERYLRSAQVSSFGEGQS 79

Query: 185 TRTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILGLSGGRSDHSLPPDATNTLFVEGLP 364
           TRT+ GR+PS+SFDDSH+ S GGVDR  +AK++ILGLS GR DHSLPPDAT+TLFVEGLP
Sbjct: 80  TRTIRGRLPSHSFDDSHVTSIGGVDRGPSAKEKILGLSSGRPDHSLPPDATSTLFVEGLP 139

Query: 365 SNCTRREVAHIFRPFVGYREVRLVSKESRQPGGDPLVLCFVDFVSPAHAATAMDALQGYK 544
           +NC RREVAHIFRPFVGY+EVRLVSKESRQPGGDPLVLCFVDF SPAHAATA DALQGYK
Sbjct: 140 TNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFESPAHAATAKDALQGYK 199

Query: 545 FDELDRNSVNLRFQFARYPGARS--GGGFRGKR 637
           FDELDRNS NLRFQFARYPGARS  GGGFRGKR
Sbjct: 200 FDELDRNSANLRFQFARYPGARSGGGGGFRGKR 232


>gb|AFK40378.1| unknown [Medicago truncatula]
          Length = 228

 Score =  357 bits (916), Expect = 3e-96
 Identities = 177/210 (84%), Positives = 190/210 (90%)
 Frame = +2

Query: 8   GKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDTESLDASYERYLRSAQVSSYGVGQST 187
           GKR R++YDVSG H+L +YFPHDDDRG LQVIRDTESLDASYERYLR+A +SS+G GQST
Sbjct: 21  GKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESLDASYERYLRNA-ISSHGSGQST 79

Query: 188 RTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILGLSGGRSDHSLPPDATNTLFVEGLPS 367
           RT+ G VPS+S DDSH+ S GGVDRRTN K +IL LSGGR DHSLPP ATNTLFVEGLPS
Sbjct: 80  RTIDGGVPSHSIDDSHVTSMGGVDRRTNVKGQILELSGGRPDHSLPPGATNTLFVEGLPS 139

Query: 368 NCTRREVAHIFRPFVGYREVRLVSKESRQPGGDPLVLCFVDFVSPAHAATAMDALQGYKF 547
           NCTRREVAHIFRPFVGY+EVRLVSKESRQPGGDPL+LCFVDFVSPAHAATAMDAL GYKF
Sbjct: 140 NCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDALHGYKF 199

Query: 548 DELDRNSVNLRFQFARYPGARSGGGFRGKR 637
           DELDRNSVNLRFQFAR PG RSGGG RGKR
Sbjct: 200 DELDRNSVNLRFQFARNPG-RSGGGHRGKR 228


>ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355491335|gb|AES72538.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 258

 Score =  348 bits (894), Expect(2) = 5e-94
 Identities = 176/214 (82%), Positives = 189/214 (88%), Gaps = 5/214 (2%)
 Frame = +2

Query: 8   GKRSRSDYDVSGAHDLPSYFPHDDDRGGLQVIRDTESLDASYERYLRSAQVSSYGVGQST 187
           GKR R++YDVSG H+L +YFPHDDDRG LQVIRDTESLDASYERYLR+A +SS+G GQST
Sbjct: 21  GKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESLDASYERYLRNA-ISSHGSGQST 79

Query: 188 RTVGGRVPSYSFDDSHIASSGGVDRRTNAKDEILGLSGGRSDHSLPPDATNTLFVEGLPS 367
           RT+ G VPS+S DDSH+ S GGVDRRTN KD+IL LSGGR DHSLPP ATNTLFVEGLPS
Sbjct: 80  RTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSGGRPDHSLPPGATNTLFVEGLPS 139

Query: 368 NCTRREVAHI-----FRPFVGYREVRLVSKESRQPGGDPLVLCFVDFVSPAHAATAMDAL 532
           NCTRREVA I     FRPFVGY+EVRLVSKESRQPGGDPL+LCFVDFVSPAHAATAMDAL
Sbjct: 140 NCTRREVARILSSDIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDAL 199

Query: 533 QGYKFDELDRNSVNLRFQFARYPGARSGGGFRGK 634
            GYKFDELDRNSVNLRFQFAR PG RSGGG RGK
Sbjct: 200 HGYKFDELDRNSVNLRFQFARNPG-RSGGGHRGK 232



 Score = 23.5 bits (49), Expect(2) = 5e-94
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 690 ETSDASLAVENYSCVR 737
           E    SLAVENY+C R
Sbjct: 243 ERQVTSLAVENYNCFR 258


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