BLASTX nr result

ID: Glycyrrhiza23_contig00010651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010651
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608235.1| F-box protein SKIP27 [Medicago truncatula] g...    81   1e-13
gb|AFK44316.1| unknown [Medicago truncatula]                           81   1e-13
gb|ACJ85993.1| unknown [Medicago truncatula]                           81   1e-13
ref|XP_003529294.1| PREDICTED: F-box protein At1g61340-like [Gly...    74   2e-11
gb|AFK39960.1| unknown [Lotus japonicus]                               72   5e-11

>ref|XP_003608235.1| F-box protein SKIP27 [Medicago truncatula]
           gi|87240734|gb|ABD32592.1| At1g61340 [Medicago
           truncatula] gi|355509290|gb|AES90432.1| F-box protein
           SKIP27 [Medicago truncatula]
          Length = 161

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = -2

Query: 189 IGDMALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRL 10
           + DM LGF++YSYGRALGRKRVVVSNN+       S+PV  PLKR+CSGRF   SE+SRL
Sbjct: 7   VSDMTLGFDTYSYGRALGRKRVVVSNND---EAFESNPVTVPLKRMCSGRFDTISEKSRL 63

Query: 9   EA 4
           EA
Sbjct: 64  EA 65


>gb|AFK44316.1| unknown [Medicago truncatula]
          Length = 161

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = -2

Query: 189 IGDMALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRL 10
           + DM LGF++YSYGRALGRKRVVVSNN+       S+PV  PLKR+CSGRF   SE+SRL
Sbjct: 7   VSDMTLGFDTYSYGRALGRKRVVVSNND---EAFESNPVTVPLKRMCSGRFDTISEKSRL 63

Query: 9   EA 4
           EA
Sbjct: 64  EA 65


>gb|ACJ85993.1| unknown [Medicago truncatula]
          Length = 144

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = -2

Query: 189 IGDMALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRL 10
           + DM LGF++YSYGRALGRKRVVVSNN+       S+PV  PLKR+CSGRF   SE+SRL
Sbjct: 7   VSDMTLGFDTYSYGRALGRKRVVVSNND---EAFESNPVTVPLKRMCSGRFDTISEKSRL 63

Query: 9   EA 4
           EA
Sbjct: 64  EA 65


>ref|XP_003529294.1| PREDICTED: F-box protein At1g61340-like [Glycine max]
          Length = 155

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 180 MALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRLEA 4
           M LGFE YSY   LGRKRVV+ +N  EAS L S+  + PLKR+CSG+F+F+SERSRLEA
Sbjct: 1   MTLGFEGYSYTTTLGRKRVVLLHN--EASSLNSNSAVNPLKRMCSGKFTFDSERSRLEA 57


>gb|AFK39960.1| unknown [Lotus japonicus]
          Length = 154

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = -2

Query: 180 MALGFESYSYGRAL--GRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRLE 7
           MALGFE YS+ R L  GRKRVVV+NN      + +  VM PLKRVCSGR +FNSERSRLE
Sbjct: 1   MALGFEGYSFARTLSMGRKRVVVTNN------VENDSVMTPLKRVCSGRINFNSERSRLE 54

Query: 6   A 4
           A
Sbjct: 55  A 55


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