BLASTX nr result

ID: Glycyrrhiza23_contig00010625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010625
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Gly...   224   1e-56
gb|AFK40444.1| unknown [Lotus japonicus]                              220   2e-55
gb|AFK46232.1| unknown [Medicago truncatula]                          218   5e-55
ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula...   218   7e-55
ref|XP_002521261.1| conserved hypothetical protein [Ricinus comm...   218   7e-55

>ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Glycine max]
          Length = 178

 Score =  224 bits (570), Expect = 1e-56
 Identities = 101/109 (92%), Positives = 107/109 (98%)
 Frame = +1

Query: 109 SYLSFKRVQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR 288
           SYLSFKRVQMYEKYPKGQ+RGRHWKHLKQIIQAENYQNYPPDEPNY NIESPPSMHPCKR
Sbjct: 68  SYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNYPPDEPNYANIESPPSMHPCKR 127

Query: 289 ICDITGFEAPYYDPRTNLRYANADVFKIVRSLPNEYVQRYLALRNAQVV 435
           ICDITGFEAPY+DPRTNLRYANA+VFKI+RSLPNEYVQRYL+LRNA +V
Sbjct: 128 ICDITGFEAPYHDPRTNLRYANAEVFKIIRSLPNEYVQRYLSLRNAAIV 176


>gb|AFK40444.1| unknown [Lotus japonicus]
          Length = 124

 Score =  220 bits (560), Expect = 2e-55
 Identities = 99/109 (90%), Positives = 106/109 (97%)
 Frame = +1

Query: 109 SYLSFKRVQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR 288
           +YLSFKRVQM+EKYPKGQSRGRHWKHLKQIIQAENYQNYPPD+PNYVNIESPPSMHPCKR
Sbjct: 14  NYLSFKRVQMHEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDQPNYVNIESPPSMHPCKR 73

Query: 289 ICDITGFEAPYYDPRTNLRYANADVFKIVRSLPNEYVQRYLALRNAQVV 435
           ICDITG+EAPYYDPRT LRYAN DVFKI+R+LPN+YVQRYLALRNA VV
Sbjct: 74  ICDITGYEAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAAVV 122


>gb|AFK46232.1| unknown [Medicago truncatula]
          Length = 129

 Score =  218 bits (556), Expect = 5e-55
 Identities = 100/126 (79%), Positives = 109/126 (86%)
 Frame = +1

Query: 58  KGEKMXXXXXXXXXXXXSYLSFKRVQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDE 237
           K +KM            +YLSFKR+QMY+KYPKGQSRGRHWKHLKQIIQAENYQNYPPDE
Sbjct: 2   KVKKMEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDE 61

Query: 238 PNYVNIESPPSMHPCKRICDITGFEAPYYDPRTNLRYANADVFKIVRSLPNEYVQRYLAL 417
           PNYVNIESPPSMHPCKRICDITG+EAPYYDP+TNLRYAN DVFK++RSLPNE VQRYL +
Sbjct: 62  PNYVNIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGM 121

Query: 418 RNAQVV 435
           RNA VV
Sbjct: 122 RNAAVV 127


>ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula]
           gi|355490532|gb|AES71735.1| INO80 complex subunit C
           [Medicago truncatula]
          Length = 124

 Score =  218 bits (555), Expect = 7e-55
 Identities = 97/109 (88%), Positives = 105/109 (96%)
 Frame = +1

Query: 109 SYLSFKRVQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR 288
           +YLSFKR+QMY+KYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR
Sbjct: 14  NYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR 73

Query: 289 ICDITGFEAPYYDPRTNLRYANADVFKIVRSLPNEYVQRYLALRNAQVV 435
           ICDITG+EAPYYDP+TNLRYAN DVFK++RSLPNE VQRYL +RNA VV
Sbjct: 74  ICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGMRNAAVV 122


>ref|XP_002521261.1| conserved hypothetical protein [Ricinus communis]
           gi|223539529|gb|EEF41117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  218 bits (555), Expect = 7e-55
 Identities = 98/109 (89%), Positives = 107/109 (98%)
 Frame = +1

Query: 109 SYLSFKRVQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPCKR 288
           ++LSFK++QMYEKYPKGQ+RGRHWKHLKQI+QAENYQNYPPDEPNYVNIESPPSMHPCKR
Sbjct: 14  THLSFKKIQMYEKYPKGQARGRHWKHLKQILQAENYQNYPPDEPNYVNIESPPSMHPCKR 73

Query: 289 ICDITGFEAPYYDPRTNLRYANADVFKIVRSLPNEYVQRYLALRNAQVV 435
           ICDITGFEAPY DPRTNLRYA+ADVFK+VRSLPN+YVQRYLALRNA VV
Sbjct: 74  ICDITGFEAPYSDPRTNLRYASADVFKLVRSLPNDYVQRYLALRNAAVV 122


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