BLASTX nr result

ID: Glycyrrhiza23_contig00010619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010619
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   145   7e-33
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...   140   2e-31
ref|XP_002517352.1| zinc finger protein, putative [Ricinus commu...   130   2e-28
gb|AFK38839.1| unknown [Lotus japonicus]                              122   6e-26

>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  152 bits (385), Expect = 4e-35
 Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = +3

Query: 75  MVMEIVISLIILFVGIAVLVSIHFCIVGRAFRRNNNNHGHSEDXXXXXXXXXXXXXAKRM 254
           M MEI++S+++LFVGIAVLV+IH CIVGRAFRR     G+                  + 
Sbjct: 1   MAMEIIVSVVLLFVGIAVLVAIHVCIVGRAFRR-----GYETGQEIGPGSFSSSRYGIKK 55

Query: 255 SSGDNIGDLKNLPCFDYEEPEKGCCSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDL 434
            S +   +LKNLPCFDY+  EK   S  DC VCL++F VGD C+LLPNC HSFH QCID 
Sbjct: 56  ISNE---ELKNLPCFDYKAAEKEGSSSSDCVVCLENFNVGDKCKLLPNCKHSFHSQCIDS 112

Query: 435 WILKTPFCPICRTWVHS-RVMMMKEEESVVPDNVEIEV 545
           W++KTP CPICRT V++ +V ++  +ES +   V +E+
Sbjct: 113 WLVKTPICPICRTIVNTPKVGLVLRQESSISIAVGVEI 150


>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score =  145 bits (366), Expect = 7e-33
 Identities = 73/131 (55%), Positives = 85/131 (64%)
 Frame = +3

Query: 81  MEIVISLIILFVGIAVLVSIHFCIVGRAFRRNNNNHGHSEDXXXXXXXXXXXXXAKRMSS 260
           M IVISLI+LF+GI VLV IH CIVGRAFR    N    E                  S+
Sbjct: 1   MAIVISLILLFLGIGVLVIIHVCIVGRAFRGGFGNGRMVE-------------RGNPRST 47

Query: 261 GDNIGDLKNLPCFDYEEPEKGCCSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWI 440
             ++ DL  LPCF ++  EKG  S VDCAVCLD+FK+GD CRLLP C+HSFH QC+D W+
Sbjct: 48  SMSLDDLDKLPCFHFQAKEKGSSSPVDCAVCLDNFKMGDKCRLLPLCNHSFHAQCVDSWL 107

Query: 441 LKTPFCPICRT 473
           LKTP CPICRT
Sbjct: 108 LKTPICPICRT 118


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score =  140 bits (354), Expect = 2e-31
 Identities = 78/161 (48%), Positives = 98/161 (60%), Gaps = 6/161 (3%)
 Frame = +3

Query: 81  MEIVISLIILFVGIAVLVSIHFCIVGRAFRRNNNNHGHSEDXXXXXXXXXXXXXAKRMSS 260
           MEIV+SL++LFVGIAVL+ IH CIVGRAFRR   N                    +R  S
Sbjct: 1   MEIVVSLVLLFVGIAVLIVIHVCIVGRAFRRAYGNGA----------------MVQRGGS 44

Query: 261 GD---NIGDLKNLPCFDYEEP--EKGCCSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQC 425
           G    +  +LK LPCF+Y+    EK   S VDCAVCL++F+ GD CRLLPNC H FH QC
Sbjct: 45  GGLGMSQDELKKLPCFEYKAVALEKASNSPVDCAVCLENFRKGDKCRLLPNCKHFFHSQC 104

Query: 426 IDLWILKTPFCPICRTWVHS-RVMMMKEEESVVPDNVEIEV 545
           ID W+LKTP CPICRT   + ++     +ES +  +V  E+
Sbjct: 105 IDSWLLKTPICPICRTCASTPKISTFSGQESGISRDVGAEL 145


>ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
           gi|223543363|gb|EEF44894.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 200

 Score =  130 bits (328), Expect = 2e-28
 Identities = 73/153 (47%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
 Frame = +3

Query: 81  MEIVISLIILFVGIAVLVSIHFCIVGRAFRRNN--NNHGHSEDXXXXXXXXXXXXXAKRM 254
           M IV+S+I+LFVGI +LV IH CI+GR+FR N+  N+   S D             +   
Sbjct: 1   MAIVVSVILLFVGIGLLVFIHACIIGRSFRNNDPANDPTGSTD-------------SPGR 47

Query: 255 SSGDNIGDLKNLPCFDYEEPEKGCCSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDL 434
           ++  +  DL+ LP FD+    KG  S VDCAVCLD+F+ GD CRLLP C HSFH QC+D 
Sbjct: 48  TTSISADDLEKLPSFDFIAKGKGS-SPVDCAVCLDNFRAGDKCRLLPICKHSFHAQCVDE 106

Query: 435 WILKTPFCPICRTWVHSR--VMMMKEEESVVPD 527
           W+LKTP CPICR    SR   + + EE S + D
Sbjct: 107 WLLKTPICPICRASAGSRRGSVAIGEESSHLSD 139


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score =  122 bits (306), Expect = 6e-26
 Identities = 59/134 (44%), Positives = 77/134 (57%)
 Frame = +3

Query: 72  IMVMEIVISLIILFVGIAVLVSIHFCIVGRAFRRNNNNHGHSEDXXXXXXXXXXXXXAKR 251
           ++ M ++ISL+++FVG+  LV IH C+    F R     G S                + 
Sbjct: 12  VLTMAVIISLVLIFVGLVFLVLIHVCL-SEWFSRTGGGSGGS-------MTERGANGGRS 63

Query: 252 MSSGDNIGDLKNLPCFDYEEPEKGCCSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCID 431
           MS  D    L+ LPC+DY   +   CS VDCAVCL++   GD CRLLP C HSFH QC+D
Sbjct: 64  MSKKD----LEKLPCYDYVAKDNSTCSPVDCAVCLENLTTGDKCRLLPVCKHSFHAQCVD 119

Query: 432 LWILKTPFCPICRT 473
            W+LKTP CPICR+
Sbjct: 120 TWLLKTPICPICRS 133


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