BLASTX nr result

ID: Glycyrrhiza23_contig00010574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010574
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   326   3e-87
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   325   4e-87
ref|XP_003612586.1| Transcription initiation factor TFIID subuni...   321   1e-85
ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   265   9e-69
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              265   9e-69

>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  326 bits (835), Expect = 3e-87
 Identities = 155/175 (88%), Positives = 167/175 (95%)
 Frame = -1

Query: 682  DIRDEYLDESRARRHDKRMLERERSGKRRSVVELGKIGGDSVPPTKRRRGGGGEVGLANI 503
            ++RDEYLD+ RARRHDKRM ER+RSGKRRSV ELGKIG D +PPTKRRRGGGGEVGLANI
Sbjct: 1736 ELRDEYLDDPRARRHDKRMPERDRSGKRRSVTELGKIGADYMPPTKRRRGGGGEVGLANI 1795

Query: 502  LESIVDAIVKDRFDLSYLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 323
            LES+VD IVKDR+DLSYLF+KPVSKKEAPDYLD+IERPMDLSRIRERVRNMEYKSREDFR
Sbjct: 1796 LESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDVIERPMDLSRIRERVRNMEYKSREDFR 1855

Query: 322  HDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAESGIENRDF 158
            HD+WQIT+NAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLT AE+GIE RDF
Sbjct: 1856 HDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTEAEAGIEIRDF 1910


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score =  325 bits (834), Expect = 4e-87
 Identities = 155/175 (88%), Positives = 167/175 (95%)
 Frame = -1

Query: 682  DIRDEYLDESRARRHDKRMLERERSGKRRSVVELGKIGGDSVPPTKRRRGGGGEVGLANI 503
            ++RDEYLD+ RARRHDKRM ER+RSGKRRS+ ELGKIG D +PPTKRRRGGGGEVGLANI
Sbjct: 1745 ELRDEYLDDLRARRHDKRMPERDRSGKRRSITELGKIGADYMPPTKRRRGGGGEVGLANI 1804

Query: 502  LESIVDAIVKDRFDLSYLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 323
            LES+VD IVKDR+DLSYLF+KPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR
Sbjct: 1805 LESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 1864

Query: 322  HDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAESGIENRDF 158
            HD+WQIT+NAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLT AE+GIE RDF
Sbjct: 1865 HDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTEAETGIEIRDF 1919


>ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
            truncatula] gi|355513921|gb|AES95544.1| Transcription
            initiation factor TFIID subunit 1-A [Medicago truncatula]
          Length = 2196

 Score =  321 bits (822), Expect = 1e-85
 Identities = 155/175 (88%), Positives = 166/175 (94%)
 Frame = -1

Query: 682  DIRDEYLDESRARRHDKRMLERERSGKRRSVVELGKIGGDSVPPTKRRRGGGGEVGLANI 503
            ++RDEYLD+SR RRH KRMLERERSGKRRSVVELGK G D +PPTKRRRGGGGEVGLANI
Sbjct: 2022 ELRDEYLDDSRERRHGKRMLERERSGKRRSVVELGKFGEDFMPPTKRRRGGGGEVGLANI 2081

Query: 502  LESIVDAIVKDRFDLSYLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 323
            LESIVDAIVKDR+DLS LF+KPV KK APDYLDIIERPMDLS+IRERVRNMEYKSREDFR
Sbjct: 2082 LESIVDAIVKDRYDLSNLFLKPVPKKLAPDYLDIIERPMDLSKIRERVRNMEYKSREDFR 2141

Query: 322  HDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAESGIENRDF 158
            HDVWQIT+NAHKYNDGRNPGIPP+ADMLLEYCDYLLNENDDSLTAAE+GIE +DF
Sbjct: 2142 HDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLNENDDSLTAAEAGIETKDF 2196


>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  265 bits (676), Expect = 9e-69
 Identities = 130/174 (74%), Positives = 152/174 (87%)
 Frame = -1

Query: 682  DIRDEYLDESRARRHDKRMLERERSGKRRSVVELGKIGGDSVPPTKRRRGGGGEVGLANI 503
            ++RD +L++ R RR+D+R+ ER+RS KRR VVELGK G D  PPTKRRRGG  EVGL+N+
Sbjct: 1897 EMRDNHLEDYRTRRNDRRIPERDRSTKRRPVVELGKFGADYGPPTKRRRGG--EVGLSNV 1954

Query: 502  LESIVDAIVKDRFDLSYLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 323
            LESIVD++ +DR+++SYLF+KPVSKKEAPDYLDII  PMDLS IRE+VR MEYK+REDFR
Sbjct: 1955 LESIVDSL-RDRYEVSYLFLKPVSKKEAPDYLDIIRDPMDLSTIREKVRKMEYKNREDFR 2013

Query: 322  HDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAESGIENRD 161
            HDVWQITYNAHKYNDGRNPGIPPLAD LLE CDYLL+END SLT AE+GIE RD
Sbjct: 2014 HDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLSENDASLTEAEAGIEYRD 2067


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  265 bits (676), Expect = 9e-69
 Identities = 130/174 (74%), Positives = 152/174 (87%)
 Frame = -1

Query: 682  DIRDEYLDESRARRHDKRMLERERSGKRRSVVELGKIGGDSVPPTKRRRGGGGEVGLANI 503
            ++RD +L++ R RR+D+R+ ER+RS KRR VVELGK G D  PPTKRRRGG  EVGL+N+
Sbjct: 1627 EMRDNHLEDYRTRRNDRRIPERDRSTKRRPVVELGKFGADYGPPTKRRRGG--EVGLSNV 1684

Query: 502  LESIVDAIVKDRFDLSYLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFR 323
            LESIVD++ +DR+++SYLF+KPVSKKEAPDYLDII  PMDLS IRE+VR MEYK+REDFR
Sbjct: 1685 LESIVDSL-RDRYEVSYLFLKPVSKKEAPDYLDIIRDPMDLSTIREKVRKMEYKNREDFR 1743

Query: 322  HDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAESGIENRD 161
            HDVWQITYNAHKYNDGRNPGIPPLAD LLE CDYLL+END SLT AE+GIE RD
Sbjct: 1744 HDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLSENDASLTEAEAGIEYRD 1797


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